RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 ADGRL1O94910 1474 aa13.82□□□□□ -0.2
COL8A1-207ENST00000483969 LRRIQ1Q96JM4 1722 aa13.82□□□□□ -0.2
COL8A1-207ENST00000483969 SPDYE16A6NNV3 312 aaPredicted RBP13.82□□□□□ -0.2
COL8A1-207ENST00000483969 TIAM1Q13009 1591 aa13.81□□□□□ -0.2
COL8A1-207ENST00000483969 CFAP74Q9C0B2 1584 aa13.8□□□□□ -0.2
COL8A1-207ENST00000483969 EN1Q05925 392 aaPredicted RBP13.8□□□□□ -0.2
COL8A1-207ENST00000483969 NBR1Q14596 966 aa13.8□□□□□ -0.2
COL8A1-207ENST00000483969 AFAP1Q8N556 730 aa13.8□□□□□ -0.2
COL8A1-207ENST00000483969 RBM33Q96EV2 1170 aaKnown RBP13.8□□□□□ -0.2
COL8A1-207ENST00000483969 KIAA1468Q9P260 1216 aa13.8□□□□□ -0.2
COL8A1-207ENST00000483969 TRIM6-TRIM34B2RNG4 842 aa13.79□□□□□ -0.2
COL8A1-207ENST00000483969 HNRNPMP52272 730 aaKnown RBP eCLIP13.79□□□□□ -0.2
COL8A1-207ENST00000483969 E2F4Q16254 413 aa13.79□□□□□ -0.2
COL8A1-207ENST00000483969 NCOA2Q15596 1464 aa13.79□□□□□ -0.2
COL8A1-207ENST00000483969 RSPH4AQ5TD94 716 aa13.78□□□□□ -0.2
COL8A1-207ENST00000483969 PAXIP1Q6ZW49 1069 aaPredicted RBP13.78□□□□□ -0.2
COL8A1-207ENST00000483969 CFAP44Q96MT7 982 aa13.77□□□□□ -0.21
COL8A1-207ENST00000483969 ARIH1Q9Y4X5 557 aaPredicted RBP13.77□□□□□ -0.21
COL8A1-207ENST00000483969 PLEKHH2Q8IVE3 1493 aa13.76□□□□□ -0.21
COL8A1-207ENST00000483969 POGZQ7Z3K3 1410 aa13.76□□□□□ -0.21
COL8A1-207ENST00000483969 KIAA1107Q9UPP5 1409 aa13.76□□□□□ -0.21
COL8A1-207ENST00000483969 MAP3K7O43318 606 aa13.76□□□□□ -0.21
COL8A1-207ENST00000483969 WDR70Q9NW82 654 aa13.76□□□□□ -0.21
COL8A1-207ENST00000483969 MAGI2Q86UL8 1455 aa13.75□□□□□ -0.21
COL8A1-207ENST00000483969 ARID4BQ4LE39 1312 aaPredicted RBP13.75□□□□□ -0.21
COL8A1-207ENST00000483969 ZNF644Q9H582 1327 aaPredicted RBP13.75□□□□□ -0.21
COL8A1-207ENST00000483969 SOWAHBA6NEL2 793 aa13.75□□□□□ -0.21
COL8A1-207ENST00000483969 ZFRQ96KR1 1074 aaKnown RBP13.75□□□□□ -0.21
COL8A1-207ENST00000483969 MYO5CQ9NQX4 1742 aa13.75□□□□□ -0.21
COL8A1-207ENST00000483969 ZNF518AQ6AHZ1 1483 aa13.74□□□□□ -0.21
COL8A1-207ENST00000483969 NYAP1Q6ZVC0 841 aa13.74□□□□□ -0.21
COL8A1-207ENST00000483969 SPAG9O60271 1321 aaKnown RBP13.73□□□□□ -0.21
COL8A1-207ENST00000483969 RGS20O76081 388 aa13.73□□□□□ -0.21
COL8A1-207ENST00000483969 BCAMP50895 628 aa13.73□□□□□ -0.21
COL8A1-207ENST00000483969 FAM98CQ17RN3 349 aaKnown RBP13.73□□□□□ -0.21
COL8A1-207ENST00000483969 SEPT9Q9UHD8 586 aaPredicted RBP13.73□□□□□ -0.21
COL8A1-207ENST00000483969 TRAPPC8Q9Y2L5 1435 aa13.73□□□□□ -0.21
COL8A1-207ENST00000483969 TSPY4P0CV99 314 aa13.72□□□□□ -0.21
COL8A1-207ENST00000483969 TSPY10P0CW01 314 aa13.72□□□□□ -0.21
COL8A1-207ENST00000483969 PREX2Q70Z35 1606 aa13.72□□□□□ -0.21
COL8A1-207ENST00000483969 SUPT6HQ7KZ85 1726 aaKnown RBP13.71□□□□□ -0.21
COL8A1-207ENST00000483969 MIA2Q96PC5 1412 aa13.71□□□□□ -0.22
COL8A1-207ENST00000483969 ARHGEF12Q9NZN5 1544 aa13.7□□□□□ -0.22
COL8A1-207ENST00000483969 A0A0G2JS52 829 aa13.7□□□□□ -0.22
COL8A1-207ENST00000483969 TSR1Q2NL82 804 aaKnown RBP13.7□□□□□ -0.22
COL8A1-207ENST00000483969 MYOM3Q5VTT5 1437 aa13.7□□□□□ -0.22
COL8A1-207ENST00000483969 MLH3Q9UHC1 1453 aa13.69□□□□□ -0.22
COL8A1-207ENST00000483969 CDC42BPBQ9Y5S2 1711 aa13.69□□□□□ -0.22
COL8A1-207ENST00000483969 ABCC1P33527 1531 aa13.69□□□□□ -0.22
COL8A1-207ENST00000483969 ATP10AO60312 1499 aa13.68□□□□□ -0.22
COL8A1-207ENST00000483969 FRMPD1Q5SYB0 1578 aa13.68□□□□□ -0.22
COL8A1-207ENST00000483969 YEATS2Q9ULM3 1422 aa13.68□□□□□ -0.22
COL8A1-207ENST00000483969 ITGBL1O95965 494 aaPredicted RBP13.68□□□□□ -0.22
COL8A1-207ENST00000483969 PACS2Q86VP3 889 aa13.68□□□□□ -0.22
COL8A1-207ENST00000483969 CERKQ8TCT0 537 aa13.68□□□□□ -0.22
COL8A1-207ENST00000483969 ZMYM4Q5VZL5 1548 aa13.68□□□□□ -0.22
COL8A1-207ENST00000483969 ZFYVE16Q7Z3T8 1539 aa13.67□□□□□ -0.22
COL8A1-207ENST00000483969 CDC42BPAQ5VT25 1732 aa13.67□□□□□ -0.22
COL8A1-207ENST00000483969 MBD5Q9P267 1494 aa13.67□□□□□ -0.22
COL8A1-207ENST00000483969 SAMD9LQ8IVG5 1584 aa13.66□□□□□ -0.22
COL8A1-207ENST00000483969 PPARGC1BQ86YN6 1023 aaKnown RBP13.66□□□□□ -0.22
COL8A1-207ENST00000483969 LRCH3Q96II8 777 aa13.66□□□□□ -0.22
COL8A1-207ENST00000483969 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.65□□□□□ -0.22
COL8A1-207ENST00000483969 SYCP2Q9BX26 1530 aa13.64□□□□□ -0.23
COL8A1-207ENST00000483969 RICTORQ6R327 1708 aa13.64□□□□□ -0.23
COL8A1-207ENST00000483969 ITSN2Q9NZM3 1697 aa13.64□□□□□ -0.23
COL8A1-207ENST00000483969 TSKSQ9UJT2 592 aa13.64□□□□□ -0.23
COL8A1-207ENST00000483969 RTEL1-TNFRSF6BF6WH68 1400 aa13.64□□□□□ -0.23
COL8A1-207ENST00000483969 C9orf84Q5VXU9 1444 aa13.64□□□□□ -0.23
COL8A1-207ENST00000483969 KDM5CP41229 1560 aa13.63□□□□□ -0.23
COL8A1-207ENST00000483969 CAMSAP2Q08AD1 1489 aa13.63□□□□□ -0.23
COL8A1-207ENST00000483969 MLECQ14165 292 aa13.63□□□□□ -0.23
COL8A1-207ENST00000483969 WBP1LQ9NX94 342 aa13.63□□□□□ -0.23
COL8A1-207ENST00000483969 GRXCR2A6NFK2 248 aa13.62□□□□□ -0.23
COL8A1-207ENST00000483969 FAM50AQ14320 339 aaKnown RBP13.62□□□□□ -0.23
COL8A1-207ENST00000483969 CDCA7LQ96GN5 454 aa13.62□□□□□ -0.23
COL8A1-207ENST00000483969 TSR3Q9UJK0 312 aaKnown RBP13.62□□□□□ -0.23
COL8A1-207ENST00000483969 FGD6Q6ZV73 1430 aa13.62□□□□□ -0.23
COL8A1-207ENST00000483969 CCDC141Q6ZP82 1450 aa13.61□□□□□ -0.23
COL8A1-207ENST00000483969 ARHGEF40Q8TER5 1519 aa13.61□□□□□ -0.23
COL8A1-207ENST00000483969 PRSS12P56730 875 aa13.61□□□□□ -0.23
COL8A1-207ENST00000483969 ESF1Q9H501 851 aaKnown RBP13.6□□□□□ -0.23
COL8A1-207ENST00000483969 HPS5Q9UPZ3 1129 aa13.6□□□□□ -0.23
COL8A1-207ENST00000483969 HECW2Q9P2P5 1572 aa13.59□□□□□ -0.23
COL8A1-207ENST00000483969 NBPF26B4DH59 902 aa13.58□□□□□ -0.24
COL8A1-207ENST00000483969 PRIM1P49642 420 aaKnown RBP13.58□□□□□ -0.24
COL8A1-207ENST00000483969 RBM27Q9P2N5 1060 aaKnown RBP13.58□□□□□ -0.24
COL8A1-207ENST00000483969 DHX29Q7Z478 1369 aaKnown RBP13.58□□□□□ -0.24
COL8A1-207ENST00000483969 TCOF1Q13428 1488 aaKnown RBP13.56□□□□□ -0.24
COL8A1-207ENST00000483969 ATP7AQ04656 1500 aa13.56□□□□□ -0.24
COL8A1-207ENST00000483969 ARHGEF5Q12774 1597 aa13.56□□□□□ -0.24
COL8A1-207ENST00000483969 ABCC5O15440 1437 aa13.56□□□□□ -0.24
COL8A1-207ENST00000483969 A2MP01023 1474 aa13.55□□□□□ -0.24
COL8A1-207ENST00000483969 OSBPP22059 807 aa13.55□□□□□ -0.24
COL8A1-207ENST00000483969 GGT6Q6P531 493 aa13.55□□□□□ -0.24
COL8A1-207ENST00000483969 CHIC2Q9UKJ5 165 aa13.55□□□□□ -0.24
COL8A1-207ENST00000483969 DIP2CQ9Y2E4 1556 aa13.54□□□□□ -0.24
COL8A1-207ENST00000483969 KIF3BO15066 747 aa13.54□□□□□ -0.24
COL8A1-207ENST00000483969 KCNC4Q03721 635 aa13.54□□□□□ -0.24
COL8A1-207ENST00000483969 RRP7BPQ9NSQ0 103 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms