RNA–Protein interactions for RNA: ENST00000483670.5

PDCD4-208, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-208ENST00000483670 PRAM1Q96QH2 718 aa37.1■■■■□ 3.53
PDCD4-208ENST00000483670 POGKQ9P215 609 aa37.1■■■■□ 3.53
PDCD4-208ENST00000483670 TRAK1Q9UPV9 953 aa37.1■■■■□ 3.53
PDCD4-208ENST00000483670 CLSPNQ9HAW4 1339 aa37.09■■■■□ 3.53
PDCD4-208ENST00000483670 C1orf167Q5SNV9 1468 aa37.07■■■■□ 3.53
PDCD4-208ENST00000483670 BRINP3Q76B58 766 aa37.07■■■■□ 3.52
PDCD4-208ENST00000483670 PHLPP1O60346 1717 aa37.07■■■■□ 3.52
PDCD4-208ENST00000483670 AHDC1Q5TGY3 1603 aaPredicted RBP37.06■■■■□ 3.52
PDCD4-208ENST00000483670 ARHGEF28Q8N1W1 1705 aaKnown RBP37.03■■■■□ 3.52
PDCD4-208ENST00000483670 TRPM1Q7Z4N2 1603 aa37.01■■■■□ 3.52
PDCD4-208ENST00000483670 FMN2Q9NZ56 1722 aa37■■■■□ 3.51
PDCD4-208ENST00000483670 ADGRB2O60241 1585 aa37■■■■□ 3.51
PDCD4-208ENST00000483670 NBPF1Q3BBV0 1214 aa36.99■■■■□ 3.51
PDCD4-208ENST00000483670 NHSL1Q5SYE7 1610 aa36.97■■■■□ 3.51
PDCD4-208ENST00000483670 SAFB2Q14151 953 aaKnown RBP eCLIP36.97■■■■□ 3.51
PDCD4-208ENST00000483670 COL16A1Q07092 1604 aaPredicted RBP36.96■■■■□ 3.51
PDCD4-208ENST00000483670 ROCK2O75116 1388 aaKnown RBP36.91■■■■□ 3.5
PDCD4-208ENST00000483670 EIF3AQ14152 1382 aaKnown RBP36.91■■■■□ 3.5
PDCD4-208ENST00000483670 ORAI2Q96SN7 254 aa36.9■■■■□ 3.5
PDCD4-208ENST00000483670 JCADQ9P266 1359 aa36.9■■■■□ 3.5
PDCD4-208ENST00000483670 ESCO1Q5FWF5 840 aa36.89■■■■□ 3.5
PDCD4-208ENST00000483670 TIMELESSQ9UNS1 1208 aa36.89■■■■□ 3.5
PDCD4-208ENST00000483670 MINK1Q8N4C8 1332 aaPredicted RBP36.86■■■■□ 3.49
PDCD4-208ENST00000483670 ANKARQ7Z5J8 1434 aa36.86■■■■□ 3.49
PDCD4-208ENST00000483670 NBPF8Q3BBV2 869 aa36.86■■■■□ 3.49
PDCD4-208ENST00000483670 GPRASP1Q5JY77 1395 aa36.85■■■■□ 3.49
PDCD4-208ENST00000483670 KIF1AQ12756 1690 aa36.85■■■■□ 3.49
PDCD4-208ENST00000483670 NUTM2FA1L443 756 aa36.83■■■■□ 3.49
PDCD4-208ENST00000483670 NPHP3Q7Z494 1330 aa36.83■■■■□ 3.49
PDCD4-208ENST00000483670 WASLO00401 505 aaPredicted RBP36.82■■■■□ 3.48
PDCD4-208ENST00000483670 CCER1Q8TC90 406 aaPredicted RBP36.82■■■■□ 3.48
PDCD4-208ENST00000483670 LRRC59Q96AG4 307 aaKnown RBP36.82■■■■□ 3.48
PDCD4-208ENST00000483670 HIRIP3Q9BW71 556 aaPredicted RBP36.82■■■■□ 3.48
PDCD4-208ENST00000483670 MED1Q15648 1581 aaPredicted RBP36.82■■■■□ 3.48
PDCD4-208ENST00000483670 CENPJQ9HC77 1338 aaPredicted RBP36.82■■■■□ 3.48
PDCD4-208ENST00000483670 RALGAPBQ86X10 1494 aa36.82■■■■□ 3.48
PDCD4-208ENST00000483670 SHPRHQ149N8 1683 aa36.8■■■■□ 3.48
PDCD4-208ENST00000483670 TULP4Q9NRJ4 1543 aa36.8■■■■□ 3.48
PDCD4-208ENST00000483670 RGPD8O14715 1765 aaPredicted RBP36.78■■■■□ 3.48
PDCD4-208ENST00000483670 SOS2Q07890 1332 aaPredicted RBP36.78■■■■□ 3.48
PDCD4-208ENST00000483670 DISP3Q9P2K9 1392 aa36.76■■■■□ 3.47
PDCD4-208ENST00000483670 USP32Q8NFA0 1604 aa36.75■■■■□ 3.47
PDCD4-208ENST00000483670 QRICH2Q9H0J4 1663 aa36.75■■■■□ 3.47
PDCD4-208ENST00000483670 SPATA31A6Q5VVP1 1343 aa36.75■■■■□ 3.47
PDCD4-208ENST00000483670 DDX17Q92841 729 aaKnown RBP36.74■■■■□ 3.47
PDCD4-208ENST00000483670 CARD11Q9BXL7 1154 aa36.73■■■■□ 3.47
PDCD4-208ENST00000483670 PHF8Q9UPP1 1060 aa36.73■■■■□ 3.47
PDCD4-208ENST00000483670 FOXO3O43524 673 aa36.71■■■■□ 3.47
PDCD4-208ENST00000483670 ITSN1Q15811 1721 aa36.7■■■■□ 3.47
PDCD4-208ENST00000483670 PXDNQ92626 1479 aa36.69■■■■□ 3.46
PDCD4-208ENST00000483670 CDK19Q9BWU1 502 aa36.68■■■■□ 3.46
PDCD4-208ENST00000483670 ATP7BP35670 1465 aa36.65■■■■□ 3.46
PDCD4-208ENST00000483670 PRR36Q9H6K5 1346 aa36.64■■■■□ 3.46
PDCD4-208ENST00000483670 NUDT16Q96DE0 195 aaKnown RBP36.63■■■■□ 3.45
PDCD4-208ENST00000483670 PNPLA6Q8IY17 1366 aa36.63■■■■□ 3.45
PDCD4-208ENST00000483670 PSME1Q06323 249 aa36.62■■■■□ 3.45
PDCD4-208ENST00000483670 PHF23Q9BUL5 403 aaPredicted RBP36.62■■■■□ 3.45
PDCD4-208ENST00000483670 SBNO2Q9Y2G9 1366 aa36.6■■■■□ 3.45
PDCD4-208ENST00000483670 EVC2Q86UK5 1308 aa36.59■■■■□ 3.45
PDCD4-208ENST00000483670 KRT28Q7Z3Y7 464 aa36.59■■■■□ 3.45
PDCD4-208ENST00000483670 CCDC61Q9Y6R9 512 aa36.59■■■■□ 3.45
PDCD4-208ENST00000483670 SRPK2P78362 688 aaKnown RBP36.58■■■■□ 3.45
PDCD4-208ENST00000483670 PMFBP1Q8TBY8 1022 aa36.58■■■■□ 3.45
PDCD4-208ENST00000483670 TOPAZ1Q8N9V7 1692 aa36.57■■■■□ 3.44
PDCD4-208ENST00000483670 COL22A1Q8NFW1 1626 aaPredicted RBP36.56■■■■□ 3.44
PDCD4-208ENST00000483670 XPCQ01831 940 aaPredicted RBP36.56■■■■□ 3.44
PDCD4-208ENST00000483670 SBNO1A3KN83 1393 aa36.53■■■■□ 3.44
PDCD4-208ENST00000483670 NGDNQ8NEJ9 315 aaKnown RBP36.53■■■■□ 3.44
PDCD4-208ENST00000483670 SPATA31A3Q5VYP0 1347 aa36.53■■■■□ 3.44
PDCD4-208ENST00000483670 LRP6O75581 1613 aa36.52■■■■□ 3.44
PDCD4-208ENST00000483670 SLC24A1O60721 1099 aa36.51■■■■□ 3.44
PDCD4-208ENST00000483670 MEX3CQ5U5Q3 659 aaKnown RBP36.5■■■■□ 3.43
PDCD4-208ENST00000483670 TNS3Q68CZ2 1445 aa36.5■■■■□ 3.43
PDCD4-208ENST00000483670 PLEKHG3A1L390 1219 aa36.49■■■■□ 3.43
PDCD4-208ENST00000483670 NUTM2BA6NNL0 878 aaPredicted RBP36.48■■■■□ 3.43
PDCD4-208ENST00000483670 NUTM2EB1AL46 878 aaPredicted RBP36.48■■■■□ 3.43
PDCD4-208ENST00000483670 NUTM2AQ8IVF1 878 aaPredicted RBP36.48■■■■□ 3.43
PDCD4-208ENST00000483670 CABP2Q9NPB3 220 aa36.48■■■■□ 3.43
PDCD4-208ENST00000483670 POLR3AO14802 1390 aaPredicted RBP36.46■■■■□ 3.43
PDCD4-208ENST00000483670 ARHGEF10O15013 1369 aa36.46■■■■□ 3.43
PDCD4-208ENST00000483670 PPIP5K1Q6PFW1 1433 aa36.44■■■■□ 3.42
PDCD4-208ENST00000483670 TRPM3Q9HCF6 1732 aaPredicted RBP36.44■■■■□ 3.42
PDCD4-208ENST00000483670 ATAD2Q6PL18 1390 aa36.41■■■■□ 3.42
PDCD4-208ENST00000483670 ACEP12821 1306 aa36.4■■■■□ 3.42
PDCD4-208ENST00000483670 USP47Q96K76 1375 aa36.4■■■■□ 3.42
PDCD4-208ENST00000483670 ST20-MTHFSA0A0A6YYL1 179 aa36.38■■■■□ 3.41
PDCD4-208ENST00000483670 ALS2Q96Q42 1657 aa36.37■■■■□ 3.41
PDCD4-208ENST00000483670 PUS7Q96PZ0 661 aaKnown RBP36.36■■■■□ 3.41
PDCD4-208ENST00000483670 BRD4O60885 1362 aaPredicted RBP36.36■■■■□ 3.41
PDCD4-208ENST00000483670 LMOD2Q6P5Q4 547 aa36.35■■■■□ 3.41
PDCD4-208ENST00000483670 CABP1Q9NZU7 370 aa36.34■■■■□ 3.41
PDCD4-208ENST00000483670 RGS17Q9UGC6 210 aaPredicted RBP36.34■■■■□ 3.41
PDCD4-208ENST00000483670 ZNF772Q68DY9 489 aaPredicted RBP36.33■■■■□ 3.41
PDCD4-208ENST00000483670 PAK3O75914 559 aaPredicted RBP36.32■■■■□ 3.4
PDCD4-208ENST00000483670 TESK2Q96S53 571 aa36.32■■■■□ 3.4
PDCD4-208ENST00000483670 MARF1Q9Y4F3 1742 aaKnown RBP36.31■■■■□ 3.4
PDCD4-208ENST00000483670 ADAMTS2O95450 1211 aa36.31■■■■□ 3.4
PDCD4-208ENST00000483670 C8orf37Q96NL8 207 aa36.29■■■■□ 3.4
PDCD4-208ENST00000483670 HAP1P54257 671 aaPredicted RBP36.28■■■■□ 3.4
PDCD4-208ENST00000483670 ZNF692Q9BU19 519 aaPredicted RBP36.27■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms