RNA–Protein interactions for RNA: ENST00000483645.5

MSL3-216, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-216ENST00000483645 ANKLE1Q8NAG6 615 aa9.51□□□□□ -0.89
MSL3-216ENST00000483645 GJA5P36382 358 aa9.5□□□□□ -0.89
MSL3-216ENST00000483645 RIC3Q7Z5B4 369 aa9.49□□□□□ -0.89
MSL3-216ENST00000483645 FAM160A2Q8N612 972 aaPredicted RBP9.49□□□□□ -0.89
MSL3-216ENST00000483645 PPEF1O14829 653 aaPredicted RBP9.48□□□□□ -0.89
MSL3-216ENST00000483645 RSBN1LQ6PCB5 846 aaPredicted RBP9.48□□□□□ -0.89
MSL3-216ENST00000483645 RETREG3Q86VR2 466 aa9.48□□□□□ -0.89
MSL3-216ENST00000483645 PRKD2Q9BZL6 878 aa9.48□□□□□ -0.89
MSL3-216ENST00000483645 SPDYE5A6NIY4 337 aa9.47□□□□□ -0.89
MSL3-216ENST00000483645 MTMR2Q13614 643 aa9.47□□□□□ -0.89
MSL3-216ENST00000483645 ATP1B4Q9UN42 357 aaPredicted RBP9.47□□□□□ -0.89
MSL3-216ENST00000483645 PCDHGC3Q9UN70 934 aa9.47□□□□□ -0.89
MSL3-216ENST00000483645 V9GY48 417 aaPredicted RBP9.47□□□□□ -0.89
MSL3-216ENST00000483645 SPTLC1O15269 473 aa9.46□□□□□ -0.9
MSL3-216ENST00000483645 MYSM1Q5VVJ2 828 aa9.46□□□□□ -0.9
MSL3-216ENST00000483645 PRDM9Q9NQV7 894 aa9.46□□□□□ -0.9
MSL3-216ENST00000483645 SYMPKQ92797 1274 aaKnown RBP9.45□□□□□ -0.9
MSL3-216ENST00000483645 ZBTB3Q9H5J0 574 aa9.45□□□□□ -0.9
MSL3-216ENST00000483645 FCF1Q9Y324 198 aaKnown RBP9.45□□□□□ -0.9
MSL3-216ENST00000483645 MMP16P51512 607 aa9.44□□□□□ -0.9
MSL3-216ENST00000483645 CSPP1Q1MSJ5 1256 aa9.44□□□□□ -0.9
MSL3-216ENST00000483645 FAM117AQ9C073 453 aa9.44□□□□□ -0.9
MSL3-216ENST00000483645 ZBTB24O43167 697 aaPredicted RBP9.43□□□□□ -0.9
MSL3-216ENST00000483645 SLC19A1P41440 591 aa9.43□□□□□ -0.9
MSL3-216ENST00000483645 CLK2P49760 499 aaKnown RBP9.43□□□□□ -0.9
MSL3-216ENST00000483645 PRPF38BQ5VTL8 546 aaKnown RBP9.43□□□□□ -0.9
MSL3-216ENST00000483645 NUTM2BA6NNL0 878 aaPredicted RBP9.42□□□□□ -0.9
MSL3-216ENST00000483645 NUTM2EB1AL46 878 aaPredicted RBP9.42□□□□□ -0.9
MSL3-216ENST00000483645 DXOO77932 396 aaKnown RBP9.42□□□□□ -0.9
MSL3-216ENST00000483645 JUNDP17535 347 aa9.42□□□□□ -0.9
MSL3-216ENST00000483645 TUSC1Q2TAM9 212 aa9.42□□□□□ -0.9
MSL3-216ENST00000483645 NUTM2DQ5VT03 806 aaPredicted RBP9.42□□□□□ -0.9
MSL3-216ENST00000483645 NUTM2AQ8IVF1 878 aaPredicted RBP9.42□□□□□ -0.9
MSL3-216ENST00000483645 POLR3EQ9NVU0 708 aa9.42□□□□□ -0.9
MSL3-216ENST00000483645 PRKCSHP14314 528 aaPredicted RBP9.41□□□□□ -0.9
MSL3-216ENST00000483645 BRPF1P55201 1214 aaPredicted RBP9.41□□□□□ -0.9
MSL3-216ENST00000483645 CCDC24Q8N4L8 307 aa9.41□□□□□ -0.9
MSL3-216ENST00000483645 PRR7Q8TB68 274 aa9.41□□□□□ -0.9
MSL3-216ENST00000483645 PCDHB15Q9Y5E8 787 aa9.41□□□□□ -0.9
MSL3-216ENST00000483645 SKIV2LQ15477 1246 aaKnown RBP9.4□□□□□ -0.9
MSL3-216ENST00000483645 SH3D19Q5HYK7 790 aa9.4□□□□□ -0.9
MSL3-216ENST00000483645 LIMD1Q9UGP4 676 aa9.4□□□□□ -0.9
MSL3-216ENST00000483645 HRCP23327 699 aa9.39□□□□□ -0.91
MSL3-216ENST00000483645 RPIAP49247 311 aa9.39□□□□□ -0.91
MSL3-216ENST00000483645 IRX2Q9BZI1 471 aaPredicted RBP9.39□□□□□ -0.91
MSL3-216ENST00000483645 CD2BP2O95400 341 aaKnown RBP9.38□□□□□ -0.91
MSL3-216ENST00000483645 DESI1Q6ICB0 168 aa9.38□□□□□ -0.91
MSL3-216ENST00000483645 IL27Q8NEV9 243 aa9.38□□□□□ -0.91
MSL3-216ENST00000483645 PLEKHG3A1L390 1219 aa9.37□□□□□ -0.91
MSL3-216ENST00000483645 PLA2G2CQ5R387 149 aa9.37□□□□□ -0.91
MSL3-216ENST00000483645 SPRYD7Q5W111 196 aa9.37□□□□□ -0.91
MSL3-216ENST00000483645 CABLES1Q8TDN4 633 aa9.37□□□□□ -0.91
MSL3-216ENST00000483645 TSC1Q92574 1164 aa9.37□□□□□ -0.91
MSL3-216ENST00000483645 NUDT12Q9BQG2 462 aa9.37□□□□□ -0.91
MSL3-216ENST00000483645 LIAT1Q6ZQX7 453 aa9.36□□□□□ -0.91
MSL3-216ENST00000483645 ZNF598Q86UK7 904 aaKnown RBP9.36□□□□□ -0.91
MSL3-216ENST00000483645 LILRB3O75022 631 aa9.35□□□□□ -0.91
MSL3-216ENST00000483645 CCNYL3P0C7X3 344 aa9.35□□□□□ -0.91
MSL3-216ENST00000483645 QPCTQ16769 361 aa9.35□□□□□ -0.91
MSL3-216ENST00000483645 PTPRNQ16849 979 aa9.35□□□□□ -0.91
MSL3-216ENST00000483645 ZNF697Q5TEC3 545 aa9.35□□□□□ -0.91
MSL3-216ENST00000483645 HELBQ8NG08 1087 aaPredicted RBP9.35□□□□□ -0.91
MSL3-216ENST00000483645 LAPTM4AQ15012 233 aa9.34□□□□□ -0.91
MSL3-216ENST00000483645 PCMTD1Q96MG8 357 aaPredicted RBP9.34□□□□□ -0.91
MSL3-216ENST00000483645 CFAP99D6REC4 459 aa9.33□□□□□ -0.92
MSL3-216ENST00000483645 EMID1Q96A84 441 aaPredicted RBP9.33□□□□□ -0.92
MSL3-216ENST00000483645 GOPCQ9HD26 462 aa9.33□□□□□ -0.92
MSL3-216ENST00000483645 PDZRN3Q9UPQ7 1066 aa9.32□□□□□ -0.92
MSL3-216ENST00000483645 GFRA3O60609 400 aa9.31□□□□□ -0.92
MSL3-216ENST00000483645 TRIM32Q13049 653 aa9.31□□□□□ -0.92
MSL3-216ENST00000483645 LYPD8Q6UX82 237 aa9.31□□□□□ -0.92
MSL3-216ENST00000483645 PROCA1Q8NCQ7 364 aaPredicted RBP9.31□□□□□ -0.92
MSL3-216ENST00000483645 CTHP32929 405 aa9.3□□□□□ -0.92
MSL3-216ENST00000483645 RTL5Q5HYW3 569 aaPredicted RBP9.3□□□□□ -0.92
MSL3-216ENST00000483645 EVA1BQ9NVM1 165 aa9.3□□□□□ -0.92
MSL3-216ENST00000483645 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.29□□□□□ -0.92
MSL3-216ENST00000483645 KCNH2Q12809 1159 aa9.28□□□□□ -0.92
MSL3-216ENST00000483645 NRG2O14511 850 aaPredicted RBP9.27□□□□□ -0.93
MSL3-216ENST00000483645 FOXC1Q12948 553 aa9.27□□□□□ -0.93
MSL3-216ENST00000483645 PRR20EP86478 221 aa9.26□□□□□ -0.93
MSL3-216ENST00000483645 PRR20CP86479 221 aa9.26□□□□□ -0.93
MSL3-216ENST00000483645 PRR20DP86480 221 aa9.26□□□□□ -0.93
MSL3-216ENST00000483645 PRR20BP86481 221 aa9.26□□□□□ -0.93
MSL3-216ENST00000483645 PRR20AP86496 221 aa9.26□□□□□ -0.93
MSL3-216ENST00000483645 PPP2R2DQ66LE6 453 aa9.26□□□□□ -0.93
MSL3-216ENST00000483645 UNC93B1Q9H1C4 597 aa9.26□□□□□ -0.93
MSL3-216ENST00000483645 TNFRSF10AO00220 468 aa9.25□□□□□ -0.93
MSL3-216ENST00000483645 WNT7BP56706 349 aa9.25□□□□□ -0.93
MSL3-216ENST00000483645 PTCRAQ6ISU1 281 aaPredicted RBP9.25□□□□□ -0.93
MSL3-216ENST00000483645 AP1G2O75843 785 aa9.24□□□□□ -0.93
MSL3-216ENST00000483645 Q6ZNB5 142 aa9.24□□□□□ -0.93
MSL3-216ENST00000483645 PER1O15534 1290 aaPredicted RBP9.23□□□□□ -0.93
MSL3-216ENST00000483645 ARMC2Q8NEN0 867 aa9.23□□□□□ -0.93
MSL3-216ENST00000483645 WNT7AO00755 349 aa9.22□□□□□ -0.93
MSL3-216ENST00000483645 GDF9O60383 454 aa9.22□□□□□ -0.93
MSL3-216ENST00000483645 F12P00748 615 aaPredicted RBP9.22□□□□□ -0.93
MSL3-216ENST00000483645 RFC5P40937 340 aa9.22□□□□□ -0.93
MSL3-216ENST00000483645 CTDSPL2Q05D32 466 aa9.22□□□□□ -0.93
MSL3-216ENST00000483645 TRIM67Q6ZTA4 783 aa9.22□□□□□ -0.93
MSL3-216ENST00000483645 CYP4X1Q8N118 509 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms