RNA–Protein interactions for RNA: ENST00000483448.1

SYPL1-206, Transcript of synaptophysin like 1, humanhuman

TSL 4

Gene SYPL1, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-206ENST00000483448 YTHDC2Q9H6S0 1430 aaKnown RBP31.51■■■□□ 2.64
SYPL1-206ENST00000483448 DHX57Q6P158 1386 aaKnown RBP31.51■■■□□ 2.63
SYPL1-206ENST00000483448 ESCO1Q5FWF5 840 aa31.5■■■□□ 2.63
SYPL1-206ENST00000483448 TECPR2O15040 1411 aa31.49■■■□□ 2.63
SYPL1-206ENST00000483448 SHPRHQ149N8 1683 aa31.49■■■□□ 2.63
SYPL1-206ENST00000483448 MYOM2P54296 1465 aa31.49■■■□□ 2.63
SYPL1-206ENST00000483448 NUTM2FA1L443 756 aa31.49■■■□□ 2.63
SYPL1-206ENST00000483448 DCAF11Q8TEB1 546 aa31.49■■■□□ 2.63
SYPL1-206ENST00000483448 LRP6O75581 1613 aa31.49■■■□□ 2.63
SYPL1-206ENST00000483448 NHSL1Q5SYE7 1610 aa31.49■■■□□ 2.63
SYPL1-206ENST00000483448 PLEKHH1Q9ULM0 1364 aa31.47■■■□□ 2.63
SYPL1-206ENST00000483448 NRXN1Q9ULB1 1477 aa31.46■■■□□ 2.63
SYPL1-206ENST00000483448 SIRT1Q96EB6 747 aa31.45■■■□□ 2.63
SYPL1-206ENST00000483448 ZNF772Q68DY9 489 aaPredicted RBP31.43■■■□□ 2.62
SYPL1-206ENST00000483448 CDC42BPGQ6DT37 1551 aa31.42■■■□□ 2.62
SYPL1-206ENST00000483448 SAFB2Q14151 953 aaKnown RBP eCLIP31.41■■■□□ 2.62
SYPL1-206ENST00000483448 PNPLA6Q8IY17 1366 aa31.41■■■□□ 2.62
SYPL1-206ENST00000483448 POGKQ9P215 609 aa31.4■■■□□ 2.62
SYPL1-206ENST00000483448 SOS2Q07890 1332 aaPredicted RBP31.4■■■□□ 2.62
SYPL1-206ENST00000483448 KNDC1Q76NI1 1749 aa31.4■■■□□ 2.62
SYPL1-206ENST00000483448 PRAM1Q96QH2 718 aa31.39■■■□□ 2.62
SYPL1-206ENST00000483448 FOXO3O43524 673 aa31.38■■■□□ 2.61
SYPL1-206ENST00000483448 STAC3Q96MF2 364 aa31.38■■■□□ 2.61
SYPL1-206ENST00000483448 LAMC1P11047 1609 aa31.38■■■□□ 2.61
SYPL1-206ENST00000483448 NPHP3Q7Z494 1330 aa31.37■■■□□ 2.61
SYPL1-206ENST00000483448 XPCQ01831 940 aaPredicted RBP31.35■■■□□ 2.61
SYPL1-206ENST00000483448 C8orf37Q96NL8 207 aa31.35■■■□□ 2.61
SYPL1-206ENST00000483448 TRAK1Q9UPV9 953 aa31.35■■■□□ 2.61
SYPL1-206ENST00000483448 ADAMTS2O95450 1211 aa31.33■■■□□ 2.61
SYPL1-206ENST00000483448 AFF2P51816 1311 aa31.32■■■□□ 2.6
SYPL1-206ENST00000483448 NGLY1Q96IV0 654 aa31.29■■■□□ 2.6
SYPL1-206ENST00000483448 RXRBP28702 533 aa31.27■■■□□ 2.6
SYPL1-206ENST00000483448 FMN2Q9NZ56 1722 aa31.24■■■□□ 2.59
SYPL1-206ENST00000483448 HIRIP3Q9BW71 556 aaPredicted RBP31.24■■■□□ 2.59
SYPL1-206ENST00000483448 PHF8Q9UPP1 1060 aa31.24■■■□□ 2.59
SYPL1-206ENST00000483448 DLC1Q96QB1 1528 aa31.24■■■□□ 2.59
SYPL1-206ENST00000483448 ADGRB1O14514 1584 aa31.23■■■□□ 2.59
SYPL1-206ENST00000483448 KRT28Q7Z3Y7 464 aa31.23■■■□□ 2.59
SYPL1-206ENST00000483448 MINK1Q8N4C8 1332 aaPredicted RBP31.23■■■□□ 2.59
SYPL1-206ENST00000483448 PXDNQ92626 1479 aa31.21■■■□□ 2.59
SYPL1-206ENST00000483448 QTRT2Q9H974 415 aaKnown RBP31.21■■■□□ 2.59
SYPL1-206ENST00000483448 PSME1Q06323 249 aa31.18■■■□□ 2.58
SYPL1-206ENST00000483448 PMFBP1Q8TBY8 1022 aa31.15■■■□□ 2.58
SYPL1-206ENST00000483448 KIF1AQ12756 1690 aa31.15■■■□□ 2.58
SYPL1-206ENST00000483448 USP21Q9UK80 565 aa31.14■■■□□ 2.58
SYPL1-206ENST00000483448 SPATA31A3Q5VYP0 1347 aa31.14■■■□□ 2.58
SYPL1-206ENST00000483448 LMOD2Q6P5Q4 547 aa31.12■■■□□ 2.57
SYPL1-206ENST00000483448 RGPD8O14715 1765 aaPredicted RBP31.12■■■□□ 2.57
SYPL1-206ENST00000483448 WASLO00401 505 aaPredicted RBP31.11■■■□□ 2.57
SYPL1-206ENST00000483448 PLEKHG5O94827 1062 aa31.11■■■□□ 2.57
SYPL1-206ENST00000483448 RBM6P78332 1123 aaKnown RBP31.11■■■□□ 2.57
SYPL1-206ENST00000483448 COL22A1Q8NFW1 1626 aaPredicted RBP31.11■■■□□ 2.57
SYPL1-206ENST00000483448 ANKARQ7Z5J8 1434 aa31.1■■■□□ 2.57
SYPL1-206ENST00000483448 EIF3AQ14152 1382 aaKnown RBP31.09■■■□□ 2.57
SYPL1-206ENST00000483448 HAP1P54257 671 aaPredicted RBP31.09■■■□□ 2.57
SYPL1-206ENST00000483448 NEUROD1Q13562 356 aa31.08■■■□□ 2.57
SYPL1-206ENST00000483448 FNBP4Q8N3X1 1017 aaPredicted RBP31.07■■■□□ 2.56
SYPL1-206ENST00000483448 SIN3AQ96ST3 1273 aa31.07■■■□□ 2.56
SYPL1-206ENST00000483448 ADGRB2O60241 1585 aa31.06■■■□□ 2.56
SYPL1-206ENST00000483448 NBPF1Q3BBV0 1214 aa31.06■■■□□ 2.56
SYPL1-206ENST00000483448 TRPC5Q9UL62 973 aaPredicted RBP31.06■■■□□ 2.56
SYPL1-206ENST00000483448 L3MBTL2Q969R5 705 aa31.04■■■□□ 2.56
SYPL1-206ENST00000483448 PRR36Q9H6K5 1346 aa31.03■■■□□ 2.56
SYPL1-206ENST00000483448 TNS3Q68CZ2 1445 aa31.02■■■□□ 2.56
SYPL1-206ENST00000483448 NGDNQ8NEJ9 315 aaKnown RBP31.02■■■□□ 2.56
SYPL1-206ENST00000483448 SBNO1A3KN83 1393 aa31.02■■■□□ 2.56
SYPL1-206ENST00000483448 CDK12Q9NYV4 1490 aaPredicted RBP31.01■■■□□ 2.56
SYPL1-206ENST00000483448 CABLES1Q8TDN4 633 aa31.01■■■□□ 2.55
SYPL1-206ENST00000483448 GPRASP1Q5JY77 1395 aa31.01■■■□□ 2.55
SYPL1-206ENST00000483448 USP32Q8NFA0 1604 aa31.01■■■□□ 2.55
SYPL1-206ENST00000483448 TULP4Q9NRJ4 1543 aa30.99■■■□□ 2.55
SYPL1-206ENST00000483448 NUDT16Q96DE0 195 aaKnown RBP30.99■■■□□ 2.55
SYPL1-206ENST00000483448 CDK19Q9BWU1 502 aa30.99■■■□□ 2.55
SYPL1-206ENST00000483448 ARHGEF28Q8N1W1 1705 aaKnown RBP30.98■■■□□ 2.55
SYPL1-206ENST00000483448 ARHGEF10O15013 1369 aa30.98■■■□□ 2.55
SYPL1-206ENST00000483448 KIAA1210Q9ULL0 1709 aa30.97■■■□□ 2.55
SYPL1-206ENST00000483448 UPF1Q92900 1129 aaKnown RBP eCLIP30.96■■■□□ 2.55
SYPL1-206ENST00000483448 PAK3O75914 559 aaPredicted RBP30.95■■■□□ 2.55
SYPL1-206ENST00000483448 RGS12O14924 1447 aa30.94■■■□□ 2.54
SYPL1-206ENST00000483448 ATRNO75882 1429 aa30.92■■■□□ 2.54
SYPL1-206ENST00000483448 BCL9LQ86UU0 1499 aa30.92■■■□□ 2.54
SYPL1-206ENST00000483448 MARF1Q9Y4F3 1742 aaKnown RBP30.92■■■□□ 2.54
SYPL1-206ENST00000483448 UNC5CLQ8IV45 518 aa30.91■■■□□ 2.54
SYPL1-206ENST00000483448 CENPJQ9HC77 1338 aaPredicted RBP30.9■■■□□ 2.54
SYPL1-206ENST00000483448 GJD4Q96KN9 370 aaPredicted RBP30.88■■■□□ 2.53
SYPL1-206ENST00000483448 SRPK2P78362 688 aaKnown RBP30.87■■■□□ 2.53
SYPL1-206ENST00000483448 CCDC61Q9Y6R9 512 aa30.87■■■□□ 2.53
SYPL1-206ENST00000483448 TRIM26Q12899 539 aaPredicted RBP30.86■■■□□ 2.53
SYPL1-206ENST00000483448 ATP7BP35670 1465 aa30.85■■■□□ 2.53
SYPL1-206ENST00000483448 CCDC9Q9Y3X0 531 aaKnown RBP30.83■■■□□ 2.53
SYPL1-206ENST00000483448 SLIT2O94813 1529 aa30.83■■■□□ 2.53
SYPL1-206ENST00000483448 FAM83GA6ND36 823 aa30.82■■■□□ 2.52
SYPL1-206ENST00000483448 ACEP12821 1306 aa30.81■■■□□ 2.52
SYPL1-206ENST00000483448 CABP2Q9NPB3 220 aa30.81■■■□□ 2.52
SYPL1-206ENST00000483448 TRPM3Q9HCF6 1732 aaPredicted RBP30.81■■■□□ 2.52
SYPL1-206ENST00000483448 NBPF8Q3BBV2 869 aa30.8■■■□□ 2.52
SYPL1-206ENST00000483448 ITSN1Q15811 1721 aa30.8■■■□□ 2.52
SYPL1-206ENST00000483448 ROCK2O75116 1388 aaKnown RBP30.79■■■□□ 2.52
SYPL1-206ENST00000483448 PLEKHG3A1L390 1219 aa30.79■■■□□ 2.52
SYPL1-206ENST00000483448 ATAD2Q6PL18 1390 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms