RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.98■■■□□ 2.23
RXRB-204ENST00000483281 SCAF1Q9H7N4 1312 aaKnown RBP28.98■■■□□ 2.23
RXRB-204ENST00000483281 ZNF316A6NFI3 1004 aaPredicted RBP28.97■■■□□ 2.23
RXRB-204ENST00000483281 TMF1P82094 1093 aa28.97■■■□□ 2.23
RXRB-204ENST00000483281 SAFB2Q14151 953 aaKnown RBP eCLIP28.97■■■□□ 2.23
RXRB-204ENST00000483281 PUS7Q96PZ0 661 aaKnown RBP28.94■■■□□ 2.22
RXRB-204ENST00000483281 ADGRB2O60241 1585 aa28.94■■■□□ 2.22
RXRB-204ENST00000483281 MINK1Q8N4C8 1332 aaPredicted RBP28.94■■■□□ 2.22
RXRB-204ENST00000483281 EVC2Q86UK5 1308 aa28.92■■■□□ 2.22
RXRB-204ENST00000483281 LRRC7Q96NW7 1537 aa28.92■■■□□ 2.22
RXRB-204ENST00000483281 CDCA8Q53HL2 280 aa28.92■■■□□ 2.22
RXRB-204ENST00000483281 LTBP4Q8N2S1 1624 aa28.91■■■□□ 2.22
RXRB-204ENST00000483281 C11orf95C9JLR9 678 aaPredicted RBP28.91■■■□□ 2.22
RXRB-204ENST00000483281 TMEM94Q12767 1356 aa28.9■■■□□ 2.22
RXRB-204ENST00000483281 ADGRL3Q9HAR2 1447 aa28.89■■■□□ 2.22
RXRB-204ENST00000483281 XIRP1Q702N8 1843 aaKnown RBP28.89■■■□□ 2.22
RXRB-204ENST00000483281 WASLO00401 505 aaPredicted RBP28.89■■■□□ 2.22
RXRB-204ENST00000483281 DISP3Q9P2K9 1392 aa28.88■■■□□ 2.21
RXRB-204ENST00000483281 TULP4Q9NRJ4 1543 aa28.88■■■□□ 2.21
RXRB-204ENST00000483281 NALCNQ8IZF0 1738 aa28.88■■■□□ 2.21
RXRB-204ENST00000483281 C19orf44Q9H6X5 657 aa28.87■■■□□ 2.21
RXRB-204ENST00000483281 CDK19Q9BWU1 502 aa28.86■■■□□ 2.21
RXRB-204ENST00000483281 RBM33Q96EV2 1170 aaKnown RBP28.86■■■□□ 2.21
RXRB-204ENST00000483281 CDC42BPGQ6DT37 1551 aa28.83■■■□□ 2.21
RXRB-204ENST00000483281 KIF7Q2M1P5 1343 aa28.83■■■□□ 2.21
RXRB-204ENST00000483281 WASHC2AQ641Q2 1341 aa28.83■■■□□ 2.21
RXRB-204ENST00000483281 CCDC7Q96M83 1385 aa28.83■■■□□ 2.21
RXRB-204ENST00000483281 C14orf37Q86TY3 774 aa28.82■■■□□ 2.2
RXRB-204ENST00000483281 DCCP43146 1447 aa28.81■■■□□ 2.2
RXRB-204ENST00000483281 SRPK2P78362 688 aaKnown RBP28.79■■■□□ 2.2
RXRB-204ENST00000483281 FMN2Q9NZ56 1722 aa28.78■■■□□ 2.2
RXRB-204ENST00000483281 CABP2Q9NPB3 220 aa28.78■■■□□ 2.2
RXRB-204ENST00000483281 MSH6P52701 1360 aa28.78■■■□□ 2.2
RXRB-204ENST00000483281 ATAD2Q6PL18 1390 aa28.76■■■□□ 2.2
RXRB-204ENST00000483281 ANKARQ7Z5J8 1434 aa28.74■■■□□ 2.19
RXRB-204ENST00000483281 CADPS2Q86UW7 1296 aa28.74■■■□□ 2.19
RXRB-204ENST00000483281 NUDT16Q96DE0 195 aaKnown RBP28.74■■■□□ 2.19
RXRB-204ENST00000483281 ATF3P18847 181 aa28.73■■■□□ 2.19
RXRB-204ENST00000483281 CCDC61Q9Y6R9 512 aa28.72■■■□□ 2.19
RXRB-204ENST00000483281 ATP7BP35670 1465 aa28.71■■■□□ 2.19
RXRB-204ENST00000483281 NINLQ9Y2I6 1382 aa28.7■■■□□ 2.19
RXRB-204ENST00000483281 PRR36Q9H6K5 1346 aa28.7■■■□□ 2.18
RXRB-204ENST00000483281 USP32Q8NFA0 1604 aa28.7■■■□□ 2.18
RXRB-204ENST00000483281 POLR3GLQ9BT43 218 aa28.69■■■□□ 2.18
RXRB-204ENST00000483281 RGPD8O14715 1765 aaPredicted RBP28.68■■■□□ 2.18
RXRB-204ENST00000483281 IQSEC2Q5JU85 1478 aa28.68■■■□□ 2.18
RXRB-204ENST00000483281 ITSN1Q15811 1721 aa28.67■■■□□ 2.18
RXRB-204ENST00000483281 MYOM1P52179 1685 aa28.66■■■□□ 2.18
RXRB-204ENST00000483281 TOPAZ1Q8N9V7 1692 aa28.66■■■□□ 2.18
RXRB-204ENST00000483281 PLEKHG3A1L390 1219 aa28.65■■■□□ 2.18
RXRB-204ENST00000483281 MST1RQ04912 1400 aa28.65■■■□□ 2.18
RXRB-204ENST00000483281 SLC12A5Q9H2X9 1139 aa28.64■■■□□ 2.17
RXRB-204ENST00000483281 CABP1Q9NZU7 370 aa28.64■■■□□ 2.17
RXRB-204ENST00000483281 NUTM2FA1L443 756 aa28.63■■■□□ 2.17
RXRB-204ENST00000483281 C1orf167Q5SNV9 1468 aa28.63■■■□□ 2.17
RXRB-204ENST00000483281 PPIP5K1Q6PFW1 1433 aa28.63■■■□□ 2.17
RXRB-204ENST00000483281 TMC1Q8TDI8 760 aa28.62■■■□□ 2.17
RXRB-204ENST00000483281 DDX10Q13206 875 aaKnown RBP28.6■■■□□ 2.17
RXRB-204ENST00000483281 SLAIN2Q9P270 581 aa28.6■■■□□ 2.17
RXRB-204ENST00000483281 CERKQ8TCT0 537 aa28.59■■■□□ 2.17
RXRB-204ENST00000483281 TERF2IPQ9NYB0 399 aa28.57■■■□□ 2.16
RXRB-204ENST00000483281 ZNF692Q9BU19 519 aaPredicted RBP28.57■■■□□ 2.16
RXRB-204ENST00000483281 ANKRD36BQ8N2N9 1353 aa28.56■■■□□ 2.16
RXRB-204ENST00000483281 ESCO1Q5FWF5 840 aa28.56■■■□□ 2.16
RXRB-204ENST00000483281 PANK3Q9H999 370 aa28.56■■■□□ 2.16
RXRB-204ENST00000483281 PHF8Q9UPP1 1060 aa28.56■■■□□ 2.16
RXRB-204ENST00000483281 CD163L1Q9NR16 1453 aa28.55■■■□□ 2.16
RXRB-204ENST00000483281 CPSF1Q10570 1443 aaKnown RBP28.55■■■□□ 2.16
RXRB-204ENST00000483281 POLR3AO14802 1390 aaPredicted RBP28.55■■■□□ 2.16
RXRB-204ENST00000483281 ORAI2Q96SN7 254 aa28.54■■■□□ 2.16
RXRB-204ENST00000483281 HDGFL2Q7Z4V5 671 aaPredicted RBP28.53■■■□□ 2.16
RXRB-204ENST00000483281 AKAP12Q02952 1782 aa28.53■■■□□ 2.16
RXRB-204ENST00000483281 KIF1AQ12756 1690 aa28.53■■■□□ 2.16
RXRB-204ENST00000483281 ACEP12821 1306 aa28.53■■■□□ 2.16
RXRB-204ENST00000483281 TOM1O60784 492 aa28.51■■■□□ 2.16
RXRB-204ENST00000483281 PER1O15534 1290 aaPredicted RBP28.51■■■□□ 2.15
RXRB-204ENST00000483281 PMFBP1Q8TBY8 1022 aa28.51■■■□□ 2.15
RXRB-204ENST00000483281 A0A1W2PP64 1363 aa28.49■■■□□ 2.15
RXRB-204ENST00000483281 NGDNQ8NEJ9 315 aaKnown RBP28.49■■■□□ 2.15
RXRB-204ENST00000483281 CARD14Q9BXL6 1004 aa28.48■■■□□ 2.15
RXRB-204ENST00000483281 BRINP3Q76B58 766 aa28.47■■■□□ 2.15
RXRB-204ENST00000483281 BRD4O60885 1362 aaPredicted RBP28.46■■■□□ 2.15
RXRB-204ENST00000483281 MON2Q7Z3U7 1717 aa28.46■■■□□ 2.15
RXRB-204ENST00000483281 KTN1Q86UP2 1357 aaKnown RBP28.46■■■□□ 2.15
RXRB-204ENST00000483281 USP6P35125 1406 aa28.42■■■□□ 2.14
RXRB-204ENST00000483281 KNSTRNQ9Y448 316 aa28.42■■■□□ 2.14
RXRB-204ENST00000483281 EDC4Q6P2E9 1401 aaKnown RBP28.42■■■□□ 2.14
RXRB-204ENST00000483281 FOXO3O43524 673 aa28.42■■■□□ 2.14
RXRB-204ENST00000483281 SSH2Q76I76 1423 aa28.41■■■□□ 2.14
RXRB-204ENST00000483281 PSME1Q06323 249 aa28.41■■■□□ 2.14
RXRB-204ENST00000483281 UBAP1LF5GYI3 381 aa28.41■■■□□ 2.14
RXRB-204ENST00000483281 NPHP3Q7Z494 1330 aa28.4■■■□□ 2.14
RXRB-204ENST00000483281 NSD3Q9BZ95 1437 aa28.39■■■□□ 2.14
RXRB-204ENST00000483281 ROBO1Q9Y6N7 1651 aa28.38■■■□□ 2.13
RXRB-204ENST00000483281 NPC1L1Q9UHC9 1359 aa28.37■■■□□ 2.13
RXRB-204ENST00000483281 NRKQ7Z2Y5 1582 aa28.37■■■□□ 2.13
RXRB-204ENST00000483281 KRT28Q7Z3Y7 464 aa28.37■■■□□ 2.13
RXRB-204ENST00000483281 NHSL1Q5SYE7 1610 aa28.36■■■□□ 2.13
RXRB-204ENST00000483281 TTC21BQ7Z4L5 1316 aa28.36■■■□□ 2.13
RXRB-204ENST00000483281 TTC21AQ8NDW8 1320 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms