RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 XPCQ01831 940 aaPredicted RBP11.14□□□□□ -0.63
CSDE1-206ENST00000483030 NAIPQ13075 1403 aa11.14□□□□□ -0.63
CSDE1-206ENST00000483030 ATAD2Q6PL18 1390 aa11.14□□□□□ -0.63
CSDE1-206ENST00000483030 FOXO3O43524 673 aa11.13□□□□□ -0.63
CSDE1-206ENST00000483030 STK26Q9P289 416 aa11.13□□□□□ -0.63
CSDE1-206ENST00000483030 NALCNQ8IZF0 1738 aa11.12□□□□□ -0.63
CSDE1-206ENST00000483030 NPHP3Q7Z494 1330 aa11.12□□□□□ -0.63
CSDE1-206ENST00000483030 HFM1A2PYH4 1435 aa11.12□□□□□ -0.63
CSDE1-206ENST00000483030 NUTM2FA1L443 756 aa11.12□□□□□ -0.63
CSDE1-206ENST00000483030 RGL3Q3MIN7 710 aa11.12□□□□□ -0.63
CSDE1-206ENST00000483030 WAPLQ7Z5K2 1190 aa11.11□□□□□ -0.63
CSDE1-206ENST00000483030 ADGRF5Q8IZF2 1346 aa11.1□□□□□ -0.63
CSDE1-206ENST00000483030 ATRNO75882 1429 aa11.1□□□□□ -0.63
CSDE1-206ENST00000483030 RRBP1Q9P2E9 1410 aaKnown RBP11.1□□□□□ -0.63
CSDE1-206ENST00000483030 ZRANB1Q9UGI0 708 aa11.1□□□□□ -0.63
CSDE1-206ENST00000483030 PRAG1Q86YV5 1406 aa11.09□□□□□ -0.63
CSDE1-206ENST00000483030 BCL9LQ86UU0 1499 aa11.09□□□□□ -0.63
CSDE1-206ENST00000483030 TMEM132EQ6IEE7 984 aa11.09□□□□□ -0.63
CSDE1-206ENST00000483030 GJD4Q96KN9 370 aaPredicted RBP11.09□□□□□ -0.63
CSDE1-206ENST00000483030 CCDC125Q86Z20 511 aa11.08□□□□□ -0.64
CSDE1-206ENST00000483030 LAMC1P11047 1609 aa11.08□□□□□ -0.64
CSDE1-206ENST00000483030 MYOM2P54296 1465 aa11.07□□□□□ -0.64
CSDE1-206ENST00000483030 LRPPRCP42704 1394 aaKnown RBP11.07□□□□□ -0.64
CSDE1-206ENST00000483030 KIF1BO60333 1816 aa11.07□□□□□ -0.64
CSDE1-206ENST00000483030 PXDNQ92626 1479 aa11.06□□□□□ -0.64
CSDE1-206ENST00000483030 PLEKHH1Q9ULM0 1364 aa11.06□□□□□ -0.64
CSDE1-206ENST00000483030 KRT28Q7Z3Y7 464 aa11.06□□□□□ -0.64
CSDE1-206ENST00000483030 UNC5CLQ8IV45 518 aa11.06□□□□□ -0.64
CSDE1-206ENST00000483030 ABCC11Q96J66 1382 aa11.05□□□□□ -0.64
CSDE1-206ENST00000483030 PLEKHG5O94827 1062 aa11.05□□□□□ -0.64
CSDE1-206ENST00000483030 SPATA31A3Q5VYP0 1347 aa11.05□□□□□ -0.64
CSDE1-206ENST00000483030 MPHOSPH9Q99550 1183 aa11.04□□□□□ -0.64
CSDE1-206ENST00000483030 SRCAPQ6ZRS2 3230 aa11.04□□□□□ -0.64
CSDE1-206ENST00000483030 ANKRD30BQ9BXX2 1392 aa11.03□□□□□ -0.64
CSDE1-206ENST00000483030 CCDC144AA2RUR9 1427 aa11.03□□□□□ -0.64
CSDE1-206ENST00000483030 COL22A1Q8NFW1 1626 aaPredicted RBP11.03□□□□□ -0.64
CSDE1-206ENST00000483030 HAP1P54257 671 aaPredicted RBP11.03□□□□□ -0.64
CSDE1-206ENST00000483030 CABLES1Q8TDN4 633 aa11.03□□□□□ -0.64
CSDE1-206ENST00000483030 CDC42BPGQ6DT37 1551 aa11.03□□□□□ -0.64
CSDE1-206ENST00000483030 TECPR2O15040 1411 aa11.02□□□□□ -0.64
CSDE1-206ENST00000483030 PSME1Q06323 249 aa11.02□□□□□ -0.65
CSDE1-206ENST00000483030 LMOD2Q6P5Q4 547 aa11.02□□□□□ -0.65
CSDE1-206ENST00000483030 SEPT12Q8IYM1 358 aa11.02□□□□□ -0.65
CSDE1-206ENST00000483030 SIRT1Q96EB6 747 aa11.02□□□□□ -0.65
CSDE1-206ENST00000483030 PHF8Q9UPP1 1060 aa11.02□□□□□ -0.65
CSDE1-206ENST00000483030 SPATA31E1Q6ZUB1 1445 aa11.01□□□□□ -0.65
CSDE1-206ENST00000483030 RALGAPBQ86X10 1494 aa11.01□□□□□ -0.65
CSDE1-206ENST00000483030 MAPK8IP2Q13387 824 aaPredicted RBP11.01□□□□□ -0.65
CSDE1-206ENST00000483030 DEFB132Q7Z7B7 95 aa11.01□□□□□ -0.65
CSDE1-206ENST00000483030 C14orf93Q9H972 538 aaKnown RBP11.01□□□□□ -0.65
CSDE1-206ENST00000483030 CCDC9Q9Y3X0 531 aaKnown RBP11.01□□□□□ -0.65
CSDE1-206ENST00000483030 YTHDC2Q9H6S0 1430 aaKnown RBP11.01□□□□□ -0.65
CSDE1-206ENST00000483030 SLIT2O94813 1529 aa11□□□□□ -0.65
CSDE1-206ENST00000483030 SF3B2Q13435 895 aaKnown RBP11□□□□□ -0.65
CSDE1-206ENST00000483030 SAFB2Q14151 953 aaKnown RBP eCLIP11□□□□□ -0.65
CSDE1-206ENST00000483030 CFAP70Q5T0N1 1121 aa11□□□□□ -0.65
CSDE1-206ENST00000483030 PPLO60437 1756 aa11□□□□□ -0.65
CSDE1-206ENST00000483030 BLMP54132 1417 aaPredicted RBP11□□□□□ -0.65
CSDE1-206ENST00000483030 VPS72Q15906 364 aa10.99□□□□□ -0.65
CSDE1-206ENST00000483030 PIK3C2GO75747 1445 aa10.99□□□□□ -0.65
CSDE1-206ENST00000483030 FAM83GA6ND36 823 aa10.98□□□□□ -0.65
CSDE1-206ENST00000483030 ONECUT3O60422 494 aaPredicted RBP10.98□□□□□ -0.65
CSDE1-206ENST00000483030 PMFBP1Q8TBY8 1022 aa10.98□□□□□ -0.65
CSDE1-206ENST00000483030 PRAM1Q96QH2 718 aa10.98□□□□□ -0.65
CSDE1-206ENST00000483030 KRT27Q7Z3Y8 459 aa10.97□□□□□ -0.65
CSDE1-206ENST00000483030 POGKQ9P215 609 aa10.97□□□□□ -0.65
CSDE1-206ENST00000483030 DHX57Q6P158 1386 aaKnown RBP10.97□□□□□ -0.65
CSDE1-206ENST00000483030 GLI3P10071 1580 aa10.96□□□□□ -0.65
CSDE1-206ENST00000483030 TNS3Q68CZ2 1445 aa10.96□□□□□ -0.65
CSDE1-206ENST00000483030 SBNO1A3KN83 1393 aa10.96□□□□□ -0.65
CSDE1-206ENST00000483030 A0A0G2JS52 829 aa10.96□□□□□ -0.65
CSDE1-206ENST00000483030 MYT1Q01538 1121 aa10.96□□□□□ -0.65
CSDE1-206ENST00000483030 EP400Q96L91 3159 aa10.95□□□□□ -0.66
CSDE1-206ENST00000483030 ARHGEF10O15013 1369 aa10.94□□□□□ -0.66
CSDE1-206ENST00000483030 FAM98CQ17RN3 349 aaKnown RBP10.94□□□□□ -0.66
CSDE1-206ENST00000483030 HIRIP3Q9BW71 556 aaPredicted RBP10.94□□□□□ -0.66
CSDE1-206ENST00000483030 FMN2Q9NZ56 1722 aa10.93□□□□□ -0.66
CSDE1-206ENST00000483030 BTG4Q9NY30 223 aa10.93□□□□□ -0.66
CSDE1-206ENST00000483030 TRAK1Q9UPV9 953 aa10.93□□□□□ -0.66
CSDE1-206ENST00000483030 NRXN1Q9ULB1 1477 aa10.93□□□□□ -0.66
CSDE1-206ENST00000483030 MARF1Q9Y4F3 1742 aaKnown RBP10.92□□□□□ -0.66
CSDE1-206ENST00000483030 USP32Q8NFA0 1604 aa10.92□□□□□ -0.66
CSDE1-206ENST00000483030 PSDA5PKW4 1024 aaPredicted RBP10.92□□□□□ -0.66
CSDE1-206ENST00000483030 BAG6P46379 1132 aa10.92□□□□□ -0.66
CSDE1-206ENST00000483030 KIF1AQ12756 1690 aa10.92□□□□□ -0.66
CSDE1-206ENST00000483030 MINK1Q8N4C8 1332 aaPredicted RBP10.91□□□□□ -0.66
CSDE1-206ENST00000483030 FAM182BQ5T319 152 aa10.91□□□□□ -0.66
CSDE1-206ENST00000483030 KDM2AQ9Y2K7 1162 aa10.91□□□□□ -0.66
CSDE1-206ENST00000483030 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.91□□□□□ -0.66
CSDE1-206ENST00000483030 GPRASP1Q5JY77 1395 aa10.9□□□□□ -0.66
CSDE1-206ENST00000483030 KNDC1Q76NI1 1749 aa10.9□□□□□ -0.66
CSDE1-206ENST00000483030 EN1Q05925 392 aaPredicted RBP10.9□□□□□ -0.66
CSDE1-206ENST00000483030 NGDNQ8NEJ9 315 aaKnown RBP10.9□□□□□ -0.66
CSDE1-206ENST00000483030 PRR36Q9H6K5 1346 aa10.89□□□□□ -0.67
CSDE1-206ENST00000483030 ACIN1Q9UKV3 1341 aaKnown RBP10.89□□□□□ -0.67
CSDE1-206ENST00000483030 WASLO00401 505 aaPredicted RBP10.89□□□□□ -0.67
CSDE1-206ENST00000483030 PAK3O75914 559 aaPredicted RBP10.89□□□□□ -0.67
CSDE1-206ENST00000483030 HRCP23327 699 aa10.89□□□□□ -0.67
CSDE1-206ENST00000483030 ANKARQ7Z5J8 1434 aa10.89□□□□□ -0.67
CSDE1-206ENST00000483030 IFT172Q9UG01 1749 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms