RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 CPS1P31327 1500 aa20.89■□□□□ 0.94
PHGDH-205ENST00000482968 XRN1Q8IZH2 1706 aaKnown RBP20.87■□□□□ 0.93
PHGDH-205ENST00000482968 CDCA8Q53HL2 280 aa20.87■□□□□ 0.93
PHGDH-205ENST00000482968 EVC2Q86UK5 1308 aa20.86■□□□□ 0.93
PHGDH-205ENST00000482968 DIEXFQ68CQ4 756 aaKnown RBP20.86■□□□□ 0.93
PHGDH-205ENST00000482968 PTCH1Q13635 1447 aa20.85■□□□□ 0.93
PHGDH-205ENST00000482968 DMRT2Q9Y5R5 561 aa20.84■□□□□ 0.93
PHGDH-205ENST00000482968 RBM33Q96EV2 1170 aaKnown RBP20.83■□□□□ 0.93
PHGDH-205ENST00000482968 CABP2Q9NPB3 220 aa20.82■□□□□ 0.92
PHGDH-205ENST00000482968 SRPK2P78362 688 aaKnown RBP20.82■□□□□ 0.92
PHGDH-205ENST00000482968 CDK19Q9BWU1 502 aa20.82■□□□□ 0.92
PHGDH-205ENST00000482968 TULP4Q9NRJ4 1543 aa20.81■□□□□ 0.92
PHGDH-205ENST00000482968 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.81■□□□□ 0.92
PHGDH-205ENST00000482968 PROSER2Q86WR7 435 aaPredicted RBP20.8■□□□□ 0.92
PHGDH-205ENST00000482968 NWD1Q149M9 1564 aa20.79■□□□□ 0.92
PHGDH-205ENST00000482968 WASLO00401 505 aaPredicted RBP20.79■□□□□ 0.92
PHGDH-205ENST00000482968 STRCP1A6NGW2 1772 aa20.77■□□□□ 0.92
PHGDH-205ENST00000482968 PUS7Q96PZ0 661 aaKnown RBP20.77■□□□□ 0.91
PHGDH-205ENST00000482968 ZNF335Q9H4Z2 1342 aaPredicted RBP20.76■□□□□ 0.91
PHGDH-205ENST00000482968 C14orf37Q86TY3 774 aa20.75■□□□□ 0.91
PHGDH-205ENST00000482968 TMC1Q8TDI8 760 aa20.75■□□□□ 0.91
PHGDH-205ENST00000482968 NKTRP30414 1462 aaKnown RBP20.73■□□□□ 0.91
PHGDH-205ENST00000482968 NUTM2FA1L443 756 aa20.73■□□□□ 0.91
PHGDH-205ENST00000482968 SLC12A5Q9H2X9 1139 aa20.73■□□□□ 0.91
PHGDH-205ENST00000482968 PANK3Q9H999 370 aa20.73■□□□□ 0.91
PHGDH-205ENST00000482968 PELP1Q8IZL8 1130 aaKnown RBP20.72■□□□□ 0.91
PHGDH-205ENST00000482968 ADGRB2O60241 1585 aa20.71■□□□□ 0.91
PHGDH-205ENST00000482968 ATAD2Q6PL18 1390 aa20.71■□□□□ 0.91
PHGDH-205ENST00000482968 NUDT16Q96DE0 195 aaKnown RBP20.7■□□□□ 0.9
PHGDH-205ENST00000482968 MYOM1P52179 1685 aa20.7■□□□□ 0.9
PHGDH-205ENST00000482968 TMEM94Q12767 1356 aa20.69■□□□□ 0.9
PHGDH-205ENST00000482968 NALCNQ8IZF0 1738 aa20.69■□□□□ 0.9
PHGDH-205ENST00000482968 CABP1Q9NZU7 370 aa20.68■□□□□ 0.9
PHGDH-205ENST00000482968 ADGRL3Q9HAR2 1447 aa20.68■□□□□ 0.9
PHGDH-205ENST00000482968 PRR36Q9H6K5 1346 aa20.67■□□□□ 0.9
PHGDH-205ENST00000482968 C19orf44Q9H6X5 657 aa20.67■□□□□ 0.9
PHGDH-205ENST00000482968 CCDC61Q9Y6R9 512 aa20.67■□□□□ 0.9
PHGDH-205ENST00000482968 PER1O15534 1290 aaPredicted RBP20.64■□□□□ 0.9
PHGDH-205ENST00000482968 CNGB1Q14028 1251 aaPredicted RBP20.64■□□□□ 0.89
PHGDH-205ENST00000482968 NCOA3Q9Y6Q9 1424 aa20.63■□□□□ 0.89
PHGDH-205ENST00000482968 LRRC7Q96NW7 1537 aa20.63■□□□□ 0.89
PHGDH-205ENST00000482968 NINLQ9Y2I6 1382 aa20.63■□□□□ 0.89
PHGDH-205ENST00000482968 ATP7BP35670 1465 aa20.63■□□□□ 0.89
PHGDH-205ENST00000482968 PPIP5K1Q6PFW1 1433 aa20.62■□□□□ 0.89
PHGDH-205ENST00000482968 CARD14Q9BXL6 1004 aa20.62■□□□□ 0.89
PHGDH-205ENST00000482968 RGPD8O14715 1765 aaPredicted RBP20.62■□□□□ 0.89
PHGDH-205ENST00000482968 CDC42BPGQ6DT37 1551 aa20.61■□□□□ 0.89
PHGDH-205ENST00000482968 FMN2Q9NZ56 1722 aa20.61■□□□□ 0.89
PHGDH-205ENST00000482968 ANP32CO43423 234 aa20.61■□□□□ 0.89
PHGDH-205ENST00000482968 MIER1Q8N108 512 aa20.61■□□□□ 0.89
PHGDH-205ENST00000482968 TERF2IPQ9NYB0 399 aa20.61■□□□□ 0.89
PHGDH-205ENST00000482968 KNSTRNQ9Y448 316 aa20.61■□□□□ 0.89
PHGDH-205ENST00000482968 XIRP1Q702N8 1843 aaKnown RBP20.61■□□□□ 0.89
PHGDH-205ENST00000482968 ATF3P18847 181 aa20.6■□□□□ 0.89
PHGDH-205ENST00000482968 USP32Q8NFA0 1604 aa20.6■□□□□ 0.89
PHGDH-205ENST00000482968 ANKRD36BQ8N2N9 1353 aa20.59■□□□□ 0.89
PHGDH-205ENST00000482968 HDGFL2Q7Z4V5 671 aaPredicted RBP20.59■□□□□ 0.89
PHGDH-205ENST00000482968 MSH6P52701 1360 aa20.59■□□□□ 0.89
PHGDH-205ENST00000482968 PMFBP1Q8TBY8 1022 aa20.59■□□□□ 0.89
PHGDH-205ENST00000482968 A0A1W2PP64 1363 aa20.57■□□□□ 0.88
PHGDH-205ENST00000482968 ANKARQ7Z5J8 1434 aa20.57■□□□□ 0.88
PHGDH-205ENST00000482968 CD163L1Q9NR16 1453 aa20.57■□□□□ 0.88
PHGDH-205ENST00000482968 PLEKHG3A1L390 1219 aa20.57■□□□□ 0.88
PHGDH-205ENST00000482968 ESCO1Q5FWF5 840 aa20.56■□□□□ 0.88
PHGDH-205ENST00000482968 CADPS2Q86UW7 1296 aa20.56■□□□□ 0.88
PHGDH-205ENST00000482968 ACEP12821 1306 aa20.55■□□□□ 0.88
PHGDH-205ENST00000482968 TOPAZ1Q8N9V7 1692 aa20.55■□□□□ 0.88
PHGDH-205ENST00000482968 CC2D1BQ5T0F9 858 aaKnown RBP20.54■□□□□ 0.88
PHGDH-205ENST00000482968 ITSN1Q15811 1721 aa20.54■□□□□ 0.88
PHGDH-205ENST00000482968 NSD3Q9BZ95 1437 aa20.54■□□□□ 0.88
PHGDH-205ENST00000482968 NGDNQ8NEJ9 315 aaKnown RBP20.54■□□□□ 0.88
PHGDH-205ENST00000482968 DCCP43146 1447 aa20.53■□□□□ 0.88
PHGDH-205ENST00000482968 LTBP4Q8N2S1 1624 aa20.53■□□□□ 0.88
PHGDH-205ENST00000482968 AMER1Q5JTC6 1135 aaPredicted RBP20.53■□□□□ 0.88
PHGDH-205ENST00000482968 ORAI2Q96SN7 254 aa20.53■□□□□ 0.88
PHGDH-205ENST00000482968 ZNF692Q9BU19 519 aaPredicted RBP20.53■□□□□ 0.88
PHGDH-205ENST00000482968 PRKRIP1Q9H875 184 aaPredicted RBP20.53■□□□□ 0.88
PHGDH-205ENST00000482968 KTN1Q86UP2 1357 aaKnown RBP20.53■□□□□ 0.88
PHGDH-205ENST00000482968 CPSF1Q10570 1443 aaKnown RBP20.53■□□□□ 0.88
PHGDH-205ENST00000482968 PHF8Q9UPP1 1060 aa20.52■□□□□ 0.88
PHGDH-205ENST00000482968 C1orf167Q5SNV9 1468 aa20.5■□□□□ 0.87
PHGDH-205ENST00000482968 MST1RQ04912 1400 aa20.5■□□□□ 0.87
PHGDH-205ENST00000482968 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.49■□□□□ 0.87
PHGDH-205ENST00000482968 CGNL1Q0VF96 1302 aa20.49■□□□□ 0.87
PHGDH-205ENST00000482968 AKAP12Q02952 1782 aa20.48■□□□□ 0.87
PHGDH-205ENST00000482968 POLR3AO14802 1390 aaPredicted RBP20.48■□□□□ 0.87
PHGDH-205ENST00000482968 SLAIN2Q9P270 581 aa20.47■□□□□ 0.87
PHGDH-205ENST00000482968 FOXO3O43524 673 aa20.46■□□□□ 0.87
PHGDH-205ENST00000482968 EDC4Q6P2E9 1401 aaKnown RBP20.45■□□□□ 0.86
PHGDH-205ENST00000482968 FYB1O15117 783 aa20.45■□□□□ 0.86
PHGDH-205ENST00000482968 RALBP1Q15311 655 aa20.45■□□□□ 0.86
PHGDH-205ENST00000482968 NPC1L1Q9UHC9 1359 aa20.45■□□□□ 0.86
PHGDH-205ENST00000482968 MON2Q7Z3U7 1717 aa20.45■□□□□ 0.86
PHGDH-205ENST00000482968 USP6P35125 1406 aa20.44■□□□□ 0.86
PHGDH-205ENST00000482968 PSME1Q06323 249 aa20.44■□□□□ 0.86
PHGDH-205ENST00000482968 GGNBP2Q9H3C7 697 aa20.44■□□□□ 0.86
PHGDH-205ENST00000482968 TTC21BQ7Z4L5 1316 aa20.43■□□□□ 0.86
PHGDH-205ENST00000482968 PARD3Q8TEW0 1356 aa20.42■□□□□ 0.86
PHGDH-205ENST00000482968 MORC1Q86VD1 984 aa20.41■□□□□ 0.86
PHGDH-205ENST00000482968 NME9Q86XW9 330 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms