RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 MED1Q15648 1581 aaPredicted RBP11.48□□□□□ -0.57
TVP23B-203ENST00000482741 PTCH1Q13635 1447 aa11.48□□□□□ -0.57
TVP23B-203ENST00000482741 MTMR7Q9Y216 660 aa11.48□□□□□ -0.57
TVP23B-203ENST00000482741 NKTRP30414 1462 aaKnown RBP11.48□□□□□ -0.57
TVP23B-203ENST00000482741 ZC3H15Q8WU90 426 aaKnown RBP11.47□□□□□ -0.57
TVP23B-203ENST00000482741 RPGRIP1LQ68CZ1 1315 aa11.47□□□□□ -0.57
TVP23B-203ENST00000482741 GTPBP6O43824 516 aaPredicted RBP11.47□□□□□ -0.57
TVP23B-203ENST00000482741 CFDP1Q9UEE9 299 aaPredicted RBP11.47□□□□□ -0.57
TVP23B-203ENST00000482741 TRPM3Q9HCF6 1732 aaPredicted RBP11.47□□□□□ -0.57
TVP23B-203ENST00000482741 PROM2Q8N271 834 aa11.46□□□□□ -0.57
TVP23B-203ENST00000482741 NHSL1Q5SYE7 1610 aa11.46□□□□□ -0.57
TVP23B-203ENST00000482741 CCDC82Q8N4S0 544 aa11.46□□□□□ -0.58
TVP23B-203ENST00000482741 MKRN3Q13064 507 aaKnown RBP11.45□□□□□ -0.58
TVP23B-203ENST00000482741 KIF20BQ96Q89 1820 aa11.45□□□□□ -0.58
TVP23B-203ENST00000482741 DHX37Q8IY37 1157 aaKnown RBP11.45□□□□□ -0.58
TVP23B-203ENST00000482741 ABCA3Q99758 1704 aa11.45□□□□□ -0.58
TVP23B-203ENST00000482741 WNK3Q9BYP7 1800 aa11.44□□□□□ -0.58
TVP23B-203ENST00000482741 PTPRMP28827 1452 aa11.44□□□□□ -0.58
TVP23B-203ENST00000482741 ALS2Q96Q42 1657 aa11.43□□□□□ -0.58
TVP23B-203ENST00000482741 SIRT1Q96EB6 747 aa11.43□□□□□ -0.58
TVP23B-203ENST00000482741 FAM135BQ49AJ0 1406 aa11.42□□□□□ -0.58
TVP23B-203ENST00000482741 SHPRHQ149N8 1683 aa11.42□□□□□ -0.58
TVP23B-203ENST00000482741 FAM208AQ9UK61 1670 aaKnown RBP11.42□□□□□ -0.58
TVP23B-203ENST00000482741 NUP155O75694 1391 aa11.41□□□□□ -0.58
TVP23B-203ENST00000482741 HOXD11P31277 338 aaPredicted RBP11.41□□□□□ -0.58
TVP23B-203ENST00000482741 PUS7Q96PZ0 661 aaKnown RBP11.41□□□□□ -0.58
TVP23B-203ENST00000482741 CICQ96RK0 1608 aaPredicted RBP11.41□□□□□ -0.58
TVP23B-203ENST00000482741 SPAG9O60271 1321 aaKnown RBP11.41□□□□□ -0.58
TVP23B-203ENST00000482741 MIER1Q8N108 512 aa11.4□□□□□ -0.58
TVP23B-203ENST00000482741 STK25O00506 426 aa11.4□□□□□ -0.58
TVP23B-203ENST00000482741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.4□□□□□ -0.58
TVP23B-203ENST00000482741 INSRP06213 1382 aa11.4□□□□□ -0.59
TVP23B-203ENST00000482741 PLEKHG2Q9H7P9 1386 aa11.39□□□□□ -0.59
TVP23B-203ENST00000482741 KANK1Q14678 1352 aa11.39□□□□□ -0.59
TVP23B-203ENST00000482741 LMO7Q8WWI1 1683 aa11.39□□□□□ -0.59
TVP23B-203ENST00000482741 DCCP43146 1447 aa11.39□□□□□ -0.59
TVP23B-203ENST00000482741 PLCH1Q4KWH8 1693 aa11.38□□□□□ -0.59
TVP23B-203ENST00000482741 ARID4BQ4LE39 1312 aaPredicted RBP11.38□□□□□ -0.59
TVP23B-203ENST00000482741 WDR70Q9NW82 654 aa11.38□□□□□ -0.59
TVP23B-203ENST00000482741 SEMA3EO15041 775 aa11.38□□□□□ -0.59
TVP23B-203ENST00000482741 HS6ST3Q8IZP7 471 aa11.37□□□□□ -0.59
TVP23B-203ENST00000482741 PLEKHG1Q9ULL1 1385 aa11.37□□□□□ -0.59
TVP23B-203ENST00000482741 POLR3GLQ9BT43 218 aa11.36□□□□□ -0.59
TVP23B-203ENST00000482741 USP35Q9P2H5 1018 aa11.36□□□□□ -0.59
TVP23B-203ENST00000482741 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.36□□□□□ -0.59
TVP23B-203ENST00000482741 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.35□□□□□ -0.59
TVP23B-203ENST00000482741 CLUAP1Q96AJ1 413 aa11.35□□□□□ -0.59
TVP23B-203ENST00000482741 LTBP4Q8N2S1 1624 aa11.35□□□□□ -0.59
TVP23B-203ENST00000482741 ZNF644Q9H582 1327 aaPredicted RBP11.34□□□□□ -0.59
TVP23B-203ENST00000482741 ADAMTS7Q9UKP4 1686 aa11.34□□□□□ -0.59
TVP23B-203ENST00000482741 RGPD1P0DJD0 1748 aa11.33□□□□□ -0.6
TVP23B-203ENST00000482741 BRD4O60885 1362 aaPredicted RBP11.33□□□□□ -0.6
TVP23B-203ENST00000482741 CADPS2Q86UW7 1296 aa11.32□□□□□ -0.6
TVP23B-203ENST00000482741 U3KPZ7 1027 aaPredicted RBP11.32□□□□□ -0.6
TVP23B-203ENST00000482741 ADAMTS13Q76LX8 1427 aa11.31□□□□□ -0.6
TVP23B-203ENST00000482741 AHDC1Q5TGY3 1603 aaPredicted RBP11.31□□□□□ -0.6
TVP23B-203ENST00000482741 SAMD1Q6SPF0 538 aaPredicted RBP11.3□□□□□ -0.6
TVP23B-203ENST00000482741 FAM69CQ0P6D2 419 aa11.29□□□□□ -0.6
TVP23B-203ENST00000482741 P3H3Q8IVL6 736 aa11.29□□□□□ -0.6
TVP23B-203ENST00000482741 SLC52A1Q9NWF4 448 aa11.28□□□□□ -0.6
TVP23B-203ENST00000482741 ZNF831Q5JPB2 1677 aa11.28□□□□□ -0.6
TVP23B-203ENST00000482741 ZEB1P37275 1124 aaPredicted RBP11.27□□□□□ -0.6
TVP23B-203ENST00000482741 SCAF11Q99590 1463 aaKnown RBP11.27□□□□□ -0.6
TVP23B-203ENST00000482741 NPC1L1Q9UHC9 1359 aa11.27□□□□□ -0.61
TVP23B-203ENST00000482741 PARP4Q9UKK3 1724 aaKnown RBP11.27□□□□□ -0.61
TVP23B-203ENST00000482741 NINLQ9Y2I6 1382 aa11.27□□□□□ -0.61
TVP23B-203ENST00000482741 PIK3C2AO00443 1686 aa11.26□□□□□ -0.61
TVP23B-203ENST00000482741 TULP4Q9NRJ4 1543 aa11.26□□□□□ -0.61
TVP23B-203ENST00000482741 ANKARQ7Z5J8 1434 aa11.26□□□□□ -0.61
TVP23B-203ENST00000482741 SMG6Q86US8 1419 aaKnown RBP11.26□□□□□ -0.61
TVP23B-203ENST00000482741 ZMYM3Q14202 1370 aa11.26□□□□□ -0.61
TVP23B-203ENST00000482741 GZF1Q9H116 711 aaPredicted RBP11.26□□□□□ -0.61
TVP23B-203ENST00000482741 CCDC144AA2RUR9 1427 aa11.25□□□□□ -0.61
TVP23B-203ENST00000482741 TSPY4P0CV99 314 aa11.25□□□□□ -0.61
TVP23B-203ENST00000482741 TSPY10P0CW01 314 aa11.25□□□□□ -0.61
TVP23B-203ENST00000482741 CYB5RLQ6IPT4 315 aa11.25□□□□□ -0.61
TVP23B-203ENST00000482741 N4BP2Q86UW6 1770 aaPredicted RBP11.24□□□□□ -0.61
TVP23B-203ENST00000482741 POLA2Q14181 598 aa11.24□□□□□ -0.61
TVP23B-203ENST00000482741 PEAK1Q9H792 1746 aa11.23□□□□□ -0.61
TVP23B-203ENST00000482741 TNRQ92752 1358 aa11.23□□□□□ -0.61
TVP23B-203ENST00000482741 MPHOSPH9Q99550 1183 aa11.22□□□□□ -0.61
TVP23B-203ENST00000482741 ATP7BP35670 1465 aa11.22□□□□□ -0.61
TVP23B-203ENST00000482741 HNRNPMP52272 730 aaKnown RBP eCLIP11.22□□□□□ -0.616e-8■■■□□ 15.2
TVP23B-203ENST00000482741 SLIT3O75094 1523 aa11.22□□□□□ -0.61
TVP23B-203ENST00000482741 TMEM2Q9UHN6 1383 aa11.22□□□□□ -0.61
TVP23B-203ENST00000482741 ZNF777Q9ULD5 760 aaPredicted RBP11.22□□□□□ -0.61
TVP23B-203ENST00000482741 TMCO4Q5TGY1 634 aa11.21□□□□□ -0.61
TVP23B-203ENST00000482741 COL18A1P39060 1754 aa11.21□□□□□ -0.61
TVP23B-203ENST00000482741 MFAP1P55081 439 aaKnown RBP11.2□□□□□ -0.62
TVP23B-203ENST00000482741 MYT1LQ9UL68 1186 aa11.2□□□□□ -0.62
TVP23B-203ENST00000482741 NWD2Q9ULI1 1742 aa11.2□□□□□ -0.62
TVP23B-203ENST00000482741 CDK12Q9NYV4 1490 aaPredicted RBP11.2□□□□□ -0.62
TVP23B-203ENST00000482741 ABCC11Q96J66 1382 aa11.2□□□□□ -0.62
TVP23B-203ENST00000482741 RGPD3A6NKT7 1758 aaPredicted RBP11.19□□□□□ -0.62
TVP23B-203ENST00000482741 RGPD4Q7Z3J3 1758 aa11.19□□□□□ -0.62
TVP23B-203ENST00000482741 STK24Q9Y6E0 443 aa11.19□□□□□ -0.62
TVP23B-203ENST00000482741 KDM4CQ9H3R0 1056 aa11.19□□□□□ -0.62
TVP23B-203ENST00000482741 DMRT2Q9Y5R5 561 aa11.19□□□□□ -0.62
TVP23B-203ENST00000482741 KTN1Q86UP2 1357 aaKnown RBP11.18□□□□□ -0.62
TVP23B-203ENST00000482741 NRAPQ86VF7 1730 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms