RNA–Protein interactions for RNA: ENST00000482693.1

SF1-215, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-215ENST00000482693 PLEKHH1Q9ULM0 1364 aa23.91■■□□□ 1.42
SF1-215ENST00000482693 ROCK2O75116 1388 aaKnown RBP23.9■■□□□ 1.42
SF1-215ENST00000482693 SCAF1Q9H7N4 1312 aaKnown RBP23.89■■□□□ 1.42
SF1-215ENST00000482693 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.89■■□□□ 1.41
SF1-215ENST00000482693 TRPM1Q7Z4N2 1603 aa23.88■■□□□ 1.41
SF1-215ENST00000482693 SAFB2Q14151 953 aaKnown RBP eCLIP23.85■■□□□ 1.41
SF1-215ENST00000482693 GPRASP1Q5JY77 1395 aa23.85■■□□□ 1.41
SF1-215ENST00000482693 NALCNQ8IZF0 1738 aa23.84■■□□□ 1.41
SF1-215ENST00000482693 RALGAPBQ86X10 1494 aa23.83■■□□□ 1.41
SF1-215ENST00000482693 CARD11Q9BXL7 1154 aa23.82■■□□□ 1.4
SF1-215ENST00000482693 MST1RQ04912 1400 aa23.81■■□□□ 1.4
SF1-215ENST00000482693 CDC42BPGQ6DT37 1551 aa23.8■■□□□ 1.4
SF1-215ENST00000482693 CENPJQ9HC77 1338 aaPredicted RBP23.79■■□□□ 1.4
SF1-215ENST00000482693 ARHGEF28Q8N1W1 1705 aaKnown RBP23.78■■□□□ 1.4
SF1-215ENST00000482693 MINK1Q8N4C8 1332 aaPredicted RBP23.78■■□□□ 1.4
SF1-215ENST00000482693 EIF3AQ14152 1382 aaKnown RBP23.78■■□□□ 1.4
SF1-215ENST00000482693 C1orf167Q5SNV9 1468 aa23.76■■□□□ 1.39
SF1-215ENST00000482693 BRINP3Q76B58 766 aa23.75■■□□□ 1.39
SF1-215ENST00000482693 HIRIP3Q9BW71 556 aaPredicted RBP23.75■■□□□ 1.39
SF1-215ENST00000482693 WASLO00401 505 aaPredicted RBP23.74■■□□□ 1.39
SF1-215ENST00000482693 HSPA1LP34931 641 aa23.73■■□□□ 1.39
SF1-215ENST00000482693 ADGRB2O60241 1585 aa23.73■■□□□ 1.39
SF1-215ENST00000482693 ROBO1Q9Y6N7 1651 aa23.73■■□□□ 1.39
SF1-215ENST00000482693 NUTM2FA1L443 756 aa23.7■■□□□ 1.38
SF1-215ENST00000482693 ESCO1Q5FWF5 840 aa23.7■■□□□ 1.38
SF1-215ENST00000482693 ORAI2Q96SN7 254 aa23.7■■□□□ 1.38
SF1-215ENST00000482693 CDK19Q9BWU1 502 aa23.68■■□□□ 1.38
SF1-215ENST00000482693 ANKARQ7Z5J8 1434 aa23.67■■□□□ 1.38
SF1-215ENST00000482693 FMN2Q9NZ56 1722 aa23.67■■□□□ 1.38
SF1-215ENST00000482693 SBNO2Q9Y2G9 1366 aa23.64■■□□□ 1.37
SF1-215ENST00000482693 EVC2Q86UK5 1308 aa23.63■■□□□ 1.37
SF1-215ENST00000482693 SLC24A1O60721 1099 aa23.63■■□□□ 1.37
SF1-215ENST00000482693 QRICH2Q9H0J4 1663 aa23.63■■□□□ 1.37
SF1-215ENST00000482693 TULP4Q9NRJ4 1543 aa23.63■■□□□ 1.37
SF1-215ENST00000482693 NUDT16Q96DE0 195 aaKnown RBP23.62■■□□□ 1.37
SF1-215ENST00000482693 PHF8Q9UPP1 1060 aa23.62■■□□□ 1.37
SF1-215ENST00000482693 AHDC1Q5TGY3 1603 aaPredicted RBP23.62■■□□□ 1.37
SF1-215ENST00000482693 ST20-MTHFSA0A0A6YYL1 179 aa23.61■■□□□ 1.37
SF1-215ENST00000482693 SRPK2P78362 688 aaKnown RBP23.61■■□□□ 1.37
SF1-215ENST00000482693 USP47Q96K76 1375 aa23.61■■□□□ 1.37
SF1-215ENST00000482693 PRR36Q9H6K5 1346 aa23.6■■□□□ 1.37
SF1-215ENST00000482693 NPHP3Q7Z494 1330 aa23.59■■□□□ 1.37
SF1-215ENST00000482693 FOXO3O43524 673 aa23.58■■□□□ 1.37
SF1-215ENST00000482693 DDX17Q92841 729 aaKnown RBP23.58■■□□□ 1.37
SF1-215ENST00000482693 CABP2Q9NPB3 220 aa23.58■■□□□ 1.37
SF1-215ENST00000482693 CCDC61Q9Y6R9 512 aa23.58■■□□□ 1.37
SF1-215ENST00000482693 PHLPP1O60346 1717 aa23.57■■□□□ 1.36
SF1-215ENST00000482693 USP32Q8NFA0 1604 aa23.57■■□□□ 1.36
SF1-215ENST00000482693 SOS2Q07890 1332 aaPredicted RBP23.57■■□□□ 1.36
SF1-215ENST00000482693 LRRC59Q96AG4 307 aaKnown RBP23.56■■□□□ 1.36
SF1-215ENST00000482693 TESK2Q96S53 571 aa23.56■■□□□ 1.36
SF1-215ENST00000482693 ATP7BP35670 1465 aa23.56■■□□□ 1.36
SF1-215ENST00000482693 NHSL1Q5SYE7 1610 aa23.55■■□□□ 1.36
SF1-215ENST00000482693 KIF1AQ12756 1690 aa23.54■■□□□ 1.36
SF1-215ENST00000482693 PMFBP1Q8TBY8 1022 aa23.54■■□□□ 1.36
SF1-215ENST00000482693 COL16A1Q07092 1604 aaPredicted RBP23.53■■□□□ 1.36
SF1-215ENST00000482693 PLEKHG3A1L390 1219 aa23.53■■□□□ 1.36
SF1-215ENST00000482693 PSME1Q06323 249 aa23.53■■□□□ 1.36
SF1-215ENST00000482693 PUS7Q96PZ0 661 aaKnown RBP23.53■■□□□ 1.36
SF1-215ENST00000482693 JCADQ9P266 1359 aa23.52■■□□□ 1.36
SF1-215ENST00000482693 EIF4G2P78344 907 aaKnown RBP eCLIP23.52■■□□□ 1.36
SF1-215ENST00000482693 RGPD8O14715 1765 aaPredicted RBP23.51■■□□□ 1.35
SF1-215ENST00000482693 KRT28Q7Z3Y7 464 aa23.51■■□□□ 1.35
SF1-215ENST00000482693 NGDNQ8NEJ9 315 aaKnown RBP23.51■■□□□ 1.35
SF1-215ENST00000482693 PXDNQ92626 1479 aa23.49■■□□□ 1.35
SF1-215ENST00000482693 TMF1P82094 1093 aa23.49■■□□□ 1.35
SF1-215ENST00000482693 XPCQ01831 940 aaPredicted RBP23.49■■□□□ 1.35
SF1-215ENST00000482693 ATAD2Q6PL18 1390 aa23.49■■□□□ 1.35
SF1-215ENST00000482693 CABP1Q9NZU7 370 aa23.48■■□□□ 1.35
SF1-215ENST00000482693 PPIP5K1Q6PFW1 1433 aa23.48■■□□□ 1.35
SF1-215ENST00000482693 POLR3AO14802 1390 aaPredicted RBP23.47■■□□□ 1.35
SF1-215ENST00000482693 ITSN1Q15811 1721 aa23.47■■□□□ 1.35
SF1-215ENST00000482693 HSPA5P11021 654 aaKnown RBP23.46■■□□□ 1.35
SF1-215ENST00000482693 ACEP12821 1306 aa23.46■■□□□ 1.35
SF1-215ENST00000482693 CDCA8Q53HL2 280 aa23.45■■□□□ 1.34
SF1-215ENST00000482693 TOPAZ1Q8N9V7 1692 aa23.44■■□□□ 1.34
SF1-215ENST00000482693 SBNO1A3KN83 1393 aa23.44■■□□□ 1.34
SF1-215ENST00000482693 SPATA31A6Q5VVP1 1343 aa23.44■■□□□ 1.34
SF1-215ENST00000482693 SPATA31A3Q5VYP0 1347 aa23.43■■□□□ 1.34
SF1-215ENST00000482693 PNPLA6Q8IY17 1366 aa23.42■■□□□ 1.34
SF1-215ENST00000482693 DISP3Q9P2K9 1392 aa23.41■■□□□ 1.34
SF1-215ENST00000482693 ZNF692Q9BU19 519 aaPredicted RBP23.4■■□□□ 1.34
SF1-215ENST00000482693 SHPRHQ149N8 1683 aa23.39■■□□□ 1.34
SF1-215ENST00000482693 TMC1Q8TDI8 760 aa23.38■■□□□ 1.33
SF1-215ENST00000482693 TNS3Q68CZ2 1445 aa23.38■■□□□ 1.33
SF1-215ENST00000482693 BRD4O60885 1362 aaPredicted RBP23.38■■□□□ 1.33
SF1-215ENST00000482693 PAK3O75914 559 aaPredicted RBP23.37■■□□□ 1.33
SF1-215ENST00000482693 ARHGEF10O15013 1369 aa23.37■■□□□ 1.33
SF1-215ENST00000482693 NINLQ9Y2I6 1382 aa23.37■■□□□ 1.33
SF1-215ENST00000482693 LMOD2Q6P5Q4 547 aa23.36■■□□□ 1.33
SF1-215ENST00000482693 ZEB1P37275 1124 aaPredicted RBP23.35■■□□□ 1.33
SF1-215ENST00000482693 SLC12A5Q9H2X9 1139 aa23.35■■□□□ 1.33
SF1-215ENST00000482693 TERF2IPQ9NYB0 399 aa23.35■■□□□ 1.33
SF1-215ENST00000482693 CPSF1Q10570 1443 aaKnown RBP23.33■■□□□ 1.33
SF1-215ENST00000482693 NUTM2BA6NNL0 878 aaPredicted RBP23.33■■□□□ 1.33
SF1-215ENST00000482693 NUTM2EB1AL46 878 aaPredicted RBP23.33■■□□□ 1.33
SF1-215ENST00000482693 HDGFL2Q7Z4V5 671 aaPredicted RBP23.33■■□□□ 1.33
SF1-215ENST00000482693 NUTM2AQ8IVF1 878 aaPredicted RBP23.33■■□□□ 1.33
SF1-215ENST00000482693 USP6P35125 1406 aa23.33■■□□□ 1.32
SF1-215ENST00000482693 TRPM3Q9HCF6 1732 aaPredicted RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms