RNA–Protein interactions for RNA: ENST00000482681.5

PDE1C-210, Transcript of phosphodiesterase 1C, humanhuman

TSL 2

Gene PDE1C, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-210ENST00000482681 ESCO1Q5FWF5 840 aa18.21■□□□□ 0.51
PDE1C-210ENST00000482681 CFAP70Q5T0N1 1121 aa18.21■□□□□ 0.51
PDE1C-210ENST00000482681 KDM2AQ9Y2K7 1162 aa18.21■□□□□ 0.51
PDE1C-210ENST00000482681 YTHDC2Q9H6S0 1430 aaKnown RBP18.21■□□□□ 0.51
PDE1C-210ENST00000482681 MYOM2P54296 1465 aa18.2■□□□□ 0.5
PDE1C-210ENST00000482681 DHX57Q6P158 1386 aaKnown RBP18.2■□□□□ 0.5
PDE1C-210ENST00000482681 LAMC1P11047 1609 aa18.2■□□□□ 0.5
PDE1C-210ENST00000482681 ABCC11Q96J66 1382 aa18.19■□□□□ 0.5
PDE1C-210ENST00000482681 TECPR2O15040 1411 aa18.19■□□□□ 0.5
PDE1C-210ENST00000482681 HRCP23327 699 aa18.19■□□□□ 0.5
PDE1C-210ENST00000482681 CDC42BPGQ6DT37 1551 aa18.19■□□□□ 0.5
PDE1C-210ENST00000482681 C14orf93Q9H972 538 aaKnown RBP18.19■□□□□ 0.5
PDE1C-210ENST00000482681 PLEKHH1Q9ULM0 1364 aa18.18■□□□□ 0.5
PDE1C-210ENST00000482681 ZNF772Q68DY9 489 aaPredicted RBP18.18■□□□□ 0.5
PDE1C-210ENST00000482681 DCAF11Q8TEB1 546 aa18.18■□□□□ 0.5
PDE1C-210ENST00000482681 SAFB2Q14151 953 aaKnown RBP eCLIP18.17■□□□□ 0.5
PDE1C-210ENST00000482681 NRXN1Q9ULB1 1477 aa18.16■□□□□ 0.5
PDE1C-210ENST00000482681 PNPLA6Q8IY17 1366 aa18.16■□□□□ 0.5
PDE1C-210ENST00000482681 POGKQ9P215 609 aa18.15■□□□□ 0.5
PDE1C-210ENST00000482681 NPHP3Q7Z494 1330 aa18.15■□□□□ 0.5
PDE1C-210ENST00000482681 C8orf37Q96NL8 207 aa18.14■□□□□ 0.49
PDE1C-210ENST00000482681 FOXO3O43524 673 aa18.13■□□□□ 0.49
PDE1C-210ENST00000482681 ADAMTS2O95450 1211 aa18.13■□□□□ 0.49
PDE1C-210ENST00000482681 XPCQ01831 940 aaPredicted RBP18.13■□□□□ 0.49
PDE1C-210ENST00000482681 PRAM1Q96QH2 718 aa18.13■□□□□ 0.49
PDE1C-210ENST00000482681 SOS2Q07890 1332 aaPredicted RBP18.13■□□□□ 0.49
PDE1C-210ENST00000482681 AFF2P51816 1311 aa18.12■□□□□ 0.49
PDE1C-210ENST00000482681 SIRT1Q96EB6 747 aa18.11■□□□□ 0.49
PDE1C-210ENST00000482681 FMN2Q9NZ56 1722 aa18.11■□□□□ 0.49
PDE1C-210ENST00000482681 TRAK1Q9UPV9 953 aa18.1■□□□□ 0.49
PDE1C-210ENST00000482681 NGLY1Q96IV0 654 aa18.09■□□□□ 0.49
PDE1C-210ENST00000482681 RXRBP28702 533 aa18.08■□□□□ 0.48
PDE1C-210ENST00000482681 STAC3Q96MF2 364 aa18.08■□□□□ 0.48
PDE1C-210ENST00000482681 RGPD8O14715 1765 aaPredicted RBP18.07■□□□□ 0.48
PDE1C-210ENST00000482681 KIF1AQ12756 1690 aa18.06■□□□□ 0.48
PDE1C-210ENST00000482681 HIRIP3Q9BW71 556 aaPredicted RBP18.06■□□□□ 0.48
PDE1C-210ENST00000482681 DLC1Q96QB1 1528 aa18.06■□□□□ 0.48
PDE1C-210ENST00000482681 MINK1Q8N4C8 1332 aaPredicted RBP18.05■□□□□ 0.48
PDE1C-210ENST00000482681 PXDNQ92626 1479 aa18.05■□□□□ 0.48
PDE1C-210ENST00000482681 ADGRB1O14514 1584 aa18.04■□□□□ 0.48
PDE1C-210ENST00000482681 QTRT2Q9H974 415 aaKnown RBP18.04■□□□□ 0.48
PDE1C-210ENST00000482681 PHF8Q9UPP1 1060 aa18.04■□□□□ 0.48
PDE1C-210ENST00000482681 PLEKHG5O94827 1062 aa18.03■□□□□ 0.48
PDE1C-210ENST00000482681 KRT28Q7Z3Y7 464 aa18.03■□□□□ 0.48
PDE1C-210ENST00000482681 HAP1P54257 671 aaPredicted RBP18.02■□□□□ 0.48
PDE1C-210ENST00000482681 PSME1Q06323 249 aa18.02■□□□□ 0.48
PDE1C-210ENST00000482681 LMOD2Q6P5Q4 547 aa18.02■□□□□ 0.48
PDE1C-210ENST00000482681 COL22A1Q8NFW1 1626 aaPredicted RBP18.01■□□□□ 0.47
PDE1C-210ENST00000482681 PMFBP1Q8TBY8 1022 aa18.01■□□□□ 0.47
PDE1C-210ENST00000482681 USP21Q9UK80 565 aa18.01■□□□□ 0.47
PDE1C-210ENST00000482681 RBM6P78332 1123 aaKnown RBP17.99■□□□□ 0.47
PDE1C-210ENST00000482681 EIF3AQ14152 1382 aaKnown RBP17.99■□□□□ 0.47
PDE1C-210ENST00000482681 SPATA31A3Q5VYP0 1347 aa17.98■□□□□ 0.47
PDE1C-210ENST00000482681 ADGRB2O60241 1585 aa17.98■□□□□ 0.47
PDE1C-210ENST00000482681 ANKARQ7Z5J8 1434 aa17.98■□□□□ 0.47
PDE1C-210ENST00000482681 ARHGEF28Q8N1W1 1705 aaKnown RBP17.97■□□□□ 0.47
PDE1C-210ENST00000482681 MARF1Q9Y4F3 1742 aaKnown RBP17.96■□□□□ 0.47
PDE1C-210ENST00000482681 WASLO00401 505 aaPredicted RBP17.96■□□□□ 0.47
PDE1C-210ENST00000482681 TRPC5Q9UL62 973 aaPredicted RBP17.96■□□□□ 0.47
PDE1C-210ENST00000482681 TNS3Q68CZ2 1445 aa17.96■□□□□ 0.47
PDE1C-210ENST00000482681 USP32Q8NFA0 1604 aa17.95■□□□□ 0.46
PDE1C-210ENST00000482681 NEUROD1Q13562 356 aa17.95■□□□□ 0.46
PDE1C-210ENST00000482681 CDK12Q9NYV4 1490 aaPredicted RBP17.95■□□□□ 0.46
PDE1C-210ENST00000482681 TULP4Q9NRJ4 1543 aa17.93■□□□□ 0.46
PDE1C-210ENST00000482681 GPRASP1Q5JY77 1395 aa17.93■□□□□ 0.46
PDE1C-210ENST00000482681 KIAA1210Q9ULL0 1709 aa17.93■□□□□ 0.46
PDE1C-210ENST00000482681 FNBP4Q8N3X1 1017 aaPredicted RBP17.93■□□□□ 0.46
PDE1C-210ENST00000482681 NGDNQ8NEJ9 315 aaKnown RBP17.93■□□□□ 0.46
PDE1C-210ENST00000482681 CABLES1Q8TDN4 633 aa17.92■□□□□ 0.46
PDE1C-210ENST00000482681 SIN3AQ96ST3 1273 aa17.92■□□□□ 0.46
PDE1C-210ENST00000482681 SBNO1A3KN83 1393 aa17.91■□□□□ 0.46
PDE1C-210ENST00000482681 ARHGEF10O15013 1369 aa17.91■□□□□ 0.46
PDE1C-210ENST00000482681 RGS12O14924 1447 aa17.91■□□□□ 0.46
PDE1C-210ENST00000482681 PAK3O75914 559 aaPredicted RBP17.91■□□□□ 0.46
PDE1C-210ENST00000482681 NBPF1Q3BBV0 1214 aa17.91■□□□□ 0.46
PDE1C-210ENST00000482681 PRR36Q9H6K5 1346 aa17.91■□□□□ 0.46
PDE1C-210ENST00000482681 ITSN1Q15811 1721 aa17.89■□□□□ 0.46
PDE1C-210ENST00000482681 UPF1Q92900 1129 aaKnown RBP eCLIP17.89■□□□□ 0.45
PDE1C-210ENST00000482681 L3MBTL2Q969R5 705 aa17.89■□□□□ 0.45
PDE1C-210ENST00000482681 ATRNO75882 1429 aa17.89■□□□□ 0.45
PDE1C-210ENST00000482681 NUDT16Q96DE0 195 aaKnown RBP17.88■□□□□ 0.45
PDE1C-210ENST00000482681 CDK19Q9BWU1 502 aa17.88■□□□□ 0.45
PDE1C-210ENST00000482681 UNC5CLQ8IV45 518 aa17.86■□□□□ 0.45
PDE1C-210ENST00000482681 CCDC9Q9Y3X0 531 aaKnown RBP17.86■□□□□ 0.45
PDE1C-210ENST00000482681 BCL9LQ86UU0 1499 aa17.86■□□□□ 0.45
PDE1C-210ENST00000482681 ATP7BP35670 1465 aa17.85■□□□□ 0.45
PDE1C-210ENST00000482681 SRPK2P78362 688 aaKnown RBP17.85■□□□□ 0.45
PDE1C-210ENST00000482681 CENPJQ9HC77 1338 aaPredicted RBP17.85■□□□□ 0.45
PDE1C-210ENST00000482681 TRPM3Q9HCF6 1732 aaPredicted RBP17.85■□□□□ 0.45
PDE1C-210ENST00000482681 ABCA3Q99758 1704 aa17.84■□□□□ 0.45
PDE1C-210ENST00000482681 GJD4Q96KN9 370 aaPredicted RBP17.84■□□□□ 0.45
PDE1C-210ENST00000482681 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.83■□□□□ 0.44
PDE1C-210ENST00000482681 ATAD2Q6PL18 1390 aa17.82■□□□□ 0.44
PDE1C-210ENST00000482681 PLCH1Q4KWH8 1693 aa17.82■□□□□ 0.44
PDE1C-210ENST00000482681 SLIT2O94813 1529 aa17.82■□□□□ 0.44
PDE1C-210ENST00000482681 ROCK2O75116 1388 aaKnown RBP17.81■□□□□ 0.44
PDE1C-210ENST00000482681 ALS2Q96Q42 1657 aa17.81■□□□□ 0.44
PDE1C-210ENST00000482681 QRICH2Q9H0J4 1663 aa17.81■□□□□ 0.44
PDE1C-210ENST00000482681 CCDC61Q9Y6R9 512 aa17.81■□□□□ 0.44
PDE1C-210ENST00000482681 TRPM1Q7Z4N2 1603 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms