RNA–Protein interactions for RNA: ENST00000482582.5

TRAIP-208, Transcript of TRAF interacting protein, humanhuman

TSL 5

Gene TRAIP, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-208ENST00000482582 KNDC1Q76NI1 1749 aa16.8■□□□□ 0.28
TRAIP-208ENST00000482582 TRAK1Q9UPV9 953 aa16.8■□□□□ 0.28
TRAIP-208ENST00000482582 COL16A1Q07092 1604 aaPredicted RBP16.79■□□□□ 0.28
TRAIP-208ENST00000482582 TECPR2O15040 1411 aa16.79■□□□□ 0.28
TRAIP-208ENST00000482582 JCADQ9P266 1359 aa16.77■□□□□ 0.28
TRAIP-208ENST00000482582 ARHGEF28Q8N1W1 1705 aaKnown RBP16.77■□□□□ 0.28
TRAIP-208ENST00000482582 WAPLQ7Z5K2 1190 aa16.77■□□□□ 0.28
TRAIP-208ENST00000482582 PLEKHH1Q9ULM0 1364 aa16.77■□□□□ 0.27
TRAIP-208ENST00000482582 C14orf37Q86TY3 774 aa16.76■□□□□ 0.27
TRAIP-208ENST00000482582 CARD11Q9BXL7 1154 aa16.76■□□□□ 0.27
TRAIP-208ENST00000482582 PTCH1Q13635 1447 aa16.76■□□□□ 0.27
TRAIP-208ENST00000482582 DLC1Q96QB1 1528 aa16.75■□□□□ 0.27
TRAIP-208ENST00000482582 DDX17Q92841 729 aaKnown RBP16.75■□□□□ 0.27
TRAIP-208ENST00000482582 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.75■□□□□ 0.27
TRAIP-208ENST00000482582 SIRT1Q96EB6 747 aa16.74■□□□□ 0.27
TRAIP-208ENST00000482582 PRAM1Q96QH2 718 aa16.74■□□□□ 0.27
TRAIP-208ENST00000482582 SAFB2Q14151 953 aaKnown RBP eCLIP16.73■□□□□ 0.27
TRAIP-208ENST00000482582 BRINP3Q76B58 766 aa16.73■□□□□ 0.27
TRAIP-208ENST00000482582 NUTM2BA6NNL0 878 aaPredicted RBP16.72■□□□□ 0.27
TRAIP-208ENST00000482582 NUTM2EB1AL46 878 aaPredicted RBP16.72■□□□□ 0.27
TRAIP-208ENST00000482582 NUTM2AQ8IVF1 878 aaPredicted RBP16.72■□□□□ 0.27
TRAIP-208ENST00000482582 UPF1Q92900 1129 aaKnown RBP eCLIP16.72■□□□□ 0.27
TRAIP-208ENST00000482582 C19orf44Q9H6X5 657 aa16.72■□□□□ 0.27
TRAIP-208ENST00000482582 NALCNQ8IZF0 1738 aa16.71■□□□□ 0.27
TRAIP-208ENST00000482582 POGKQ9P215 609 aa16.7■□□□□ 0.26
TRAIP-208ENST00000482582 ATF3P18847 181 aa16.69■□□□□ 0.26
TRAIP-208ENST00000482582 MEX3CQ5U5Q3 659 aaKnown RBP16.69■□□□□ 0.26
TRAIP-208ENST00000482582 ZEB1P37275 1124 aaPredicted RBP16.68■□□□□ 0.26
TRAIP-208ENST00000482582 NCOA3Q9Y6Q9 1424 aa16.68■□□□□ 0.26
TRAIP-208ENST00000482582 QRICH2Q9H0J4 1663 aa16.68■□□□□ 0.26
TRAIP-208ENST00000482582 CENPJQ9HC77 1338 aaPredicted RBP16.68■□□□□ 0.26
TRAIP-208ENST00000482582 USP47Q96K76 1375 aa16.67■□□□□ 0.26
TRAIP-208ENST00000482582 CADPS2Q86UW7 1296 aa16.67■□□□□ 0.26
TRAIP-208ENST00000482582 ADGRL3Q9HAR2 1447 aa16.67■□□□□ 0.26
TRAIP-208ENST00000482582 MINK1Q8N4C8 1332 aaPredicted RBP16.67■□□□□ 0.26
TRAIP-208ENST00000482582 AHDC1Q5TGY3 1603 aaPredicted RBP16.67■□□□□ 0.26
TRAIP-208ENST00000482582 ST20-MTHFSA0A0A6YYL1 179 aa16.66■□□□□ 0.26
TRAIP-208ENST00000482582 HIRIP3Q9BW71 556 aaPredicted RBP16.66■□□□□ 0.26
TRAIP-208ENST00000482582 SPATA31A6Q5VVP1 1343 aa16.66■□□□□ 0.26
TRAIP-208ENST00000482582 EIF3AQ14152 1382 aaKnown RBP16.64■□□□□ 0.25
TRAIP-208ENST00000482582 MST1RQ04912 1400 aa16.63■□□□□ 0.25
TRAIP-208ENST00000482582 SHPRHQ149N8 1683 aa16.63■□□□□ 0.25
TRAIP-208ENST00000482582 HSPA5P11021 654 aaKnown RBP16.63■□□□□ 0.25
TRAIP-208ENST00000482582 AFF2P51816 1311 aa16.63■□□□□ 0.25
TRAIP-208ENST00000482582 RXRBP28702 533 aa16.62■□□□□ 0.25
TRAIP-208ENST00000482582 ZNF772Q68DY9 489 aaPredicted RBP16.62■□□□□ 0.25
TRAIP-208ENST00000482582 TESK2Q96S53 571 aa16.62■□□□□ 0.25
TRAIP-208ENST00000482582 ADGRB2O60241 1585 aa16.62■□□□□ 0.25
TRAIP-208ENST00000482582 EIF4G2P78344 907 aaKnown RBP eCLIP16.61■□□□□ 0.25
TRAIP-208ENST00000482582 CDC42BPGQ6DT37 1551 aa16.6■□□□□ 0.25
TRAIP-208ENST00000482582 RGPD8O14715 1765 aaPredicted RBP16.6■□□□□ 0.25
TRAIP-208ENST00000482582 TULP4Q9NRJ4 1543 aa16.6■□□□□ 0.25
TRAIP-208ENST00000482582 FMN2Q9NZ56 1722 aa16.59■□□□□ 0.25
TRAIP-208ENST00000482582 WASLO00401 505 aaPredicted RBP16.59■□□□□ 0.25
TRAIP-208ENST00000482582 DCCP43146 1447 aa16.59■□□□□ 0.25
TRAIP-208ENST00000482582 NUTM2FA1L443 756 aa16.58■□□□□ 0.24
TRAIP-208ENST00000482582 C8orf37Q96NL8 207 aa16.58■□□□□ 0.24
TRAIP-208ENST00000482582 CDK19Q9BWU1 502 aa16.58■□□□□ 0.24
TRAIP-208ENST00000482582 SBNO2Q9Y2G9 1366 aa16.58■□□□□ 0.24
TRAIP-208ENST00000482582 ORAI2Q96SN7 254 aa16.57■□□□□ 0.24
TRAIP-208ENST00000482582 USP32Q8NFA0 1604 aa16.56■□□□□ 0.24
TRAIP-208ENST00000482582 QTRT2Q9H974 415 aaKnown RBP16.56■□□□□ 0.24
TRAIP-208ENST00000482582 PNPLA6Q8IY17 1366 aa16.55■□□□□ 0.24
TRAIP-208ENST00000482582 PRR36Q9H6K5 1346 aa16.55■□□□□ 0.24
TRAIP-208ENST00000482582 ADAMTS2O95450 1211 aa16.55■□□□□ 0.24
TRAIP-208ENST00000482582 CABP2Q9NPB3 220 aa16.55■□□□□ 0.24
TRAIP-208ENST00000482582 NHSL1Q5SYE7 1610 aa16.55■□□□□ 0.24
TRAIP-208ENST00000482582 C1orf167Q5SNV9 1468 aa16.54■□□□□ 0.24
TRAIP-208ENST00000482582 RGS12O14924 1447 aa16.54■□□□□ 0.24
TRAIP-208ENST00000482582 EVC2Q86UK5 1308 aa16.54■□□□□ 0.24
TRAIP-208ENST00000482582 LRRC59Q96AG4 307 aaKnown RBP16.53■□□□□ 0.24
TRAIP-208ENST00000482582 C11orf95C9JLR9 678 aaPredicted RBP16.52■□□□□ 0.24
TRAIP-208ENST00000482582 SRPK2P78362 688 aaKnown RBP16.52■□□□□ 0.24
TRAIP-208ENST00000482582 NUDT16Q96DE0 195 aaKnown RBP16.52■□□□□ 0.24
TRAIP-208ENST00000482582 ATP7BP35670 1465 aa16.51■□□□□ 0.23
TRAIP-208ENST00000482582 ANKARQ7Z5J8 1434 aa16.5■□□□□ 0.23
TRAIP-208ENST00000482582 SRCAPQ6ZRS2 3230 aa16.5■□□□□ 0.23
TRAIP-208ENST00000482582 TMF1P82094 1093 aa16.49■□□□□ 0.23
TRAIP-208ENST00000482582 NGLY1Q96IV0 654 aa16.49■□□□□ 0.23
TRAIP-208ENST00000482582 TOPAZ1Q8N9V7 1692 aa16.49■□□□□ 0.23
TRAIP-208ENST00000482582 RBM6P78332 1123 aaKnown RBP16.48■□□□□ 0.23
TRAIP-208ENST00000482582 ESCO1Q5FWF5 840 aa16.48■□□□□ 0.23
TRAIP-208ENST00000482582 CDK12Q9NYV4 1490 aaPredicted RBP16.48■□□□□ 0.23
TRAIP-208ENST00000482582 ITSN1Q15811 1721 aa16.47■□□□□ 0.23
TRAIP-208ENST00000482582 SLC24A1O60721 1099 aa16.46■□□□□ 0.23
TRAIP-208ENST00000482582 XPCQ01831 940 aaPredicted RBP16.46■□□□□ 0.23
TRAIP-208ENST00000482582 PMFBP1Q8TBY8 1022 aa16.46■□□□□ 0.23
TRAIP-208ENST00000482582 CCDC61Q9Y6R9 512 aa16.46■□□□□ 0.23
TRAIP-208ENST00000482582 SOS2Q07890 1332 aaPredicted RBP16.45■□□□□ 0.22
TRAIP-208ENST00000482582 PUS7Q96PZ0 661 aaKnown RBP16.45■□□□□ 0.22
TRAIP-208ENST00000482582 CABP1Q9NZU7 370 aa16.45■□□□□ 0.22
TRAIP-208ENST00000482582 PHF8Q9UPP1 1060 aa16.45■□□□□ 0.22
TRAIP-208ENST00000482582 PPIP5K1Q6PFW1 1433 aa16.44■□□□□ 0.22
TRAIP-208ENST00000482582 ATAD2Q6PL18 1390 aa16.43■□□□□ 0.22
TRAIP-208ENST00000482582 PLEKHG3A1L390 1219 aa16.43■□□□□ 0.22
TRAIP-208ENST00000482582 FOXO3O43524 673 aa16.43■□□□□ 0.22
TRAIP-208ENST00000482582 SLC12A5Q9H2X9 1139 aa16.43■□□□□ 0.22
TRAIP-208ENST00000482582 USP21Q9UK80 565 aa16.43■□□□□ 0.22
TRAIP-208ENST00000482582 KIF7Q2M1P5 1343 aa16.43■□□□□ 0.22
TRAIP-208ENST00000482582 POLR3GLQ9BT43 218 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms