RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 TECPR2O15040 1411 aa18.74■□□□□ 0.59
HDAC1-208ENST00000482310 MED1Q15648 1581 aaPredicted RBP18.74■□□□□ 0.59
HDAC1-208ENST00000482310 ABCC11Q96J66 1382 aa18.74■□□□□ 0.59
HDAC1-208ENST00000482310 PRAM1Q96QH2 718 aa18.74■□□□□ 0.59
HDAC1-208ENST00000482310 POGKQ9P215 609 aa18.74■□□□□ 0.59
HDAC1-208ENST00000482310 TMEM94Q12767 1356 aa18.73■□□□□ 0.59
HDAC1-208ENST00000482310 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
HDAC1-208ENST00000482310 EIF3AQ14152 1382 aaKnown RBP18.71■□□□□ 0.59
HDAC1-208ENST00000482310 USP47Q96K76 1375 aa18.71■□□□□ 0.59
HDAC1-208ENST00000482310 RGPD8O14715 1765 aaPredicted RBP18.7■□□□□ 0.58
HDAC1-208ENST00000482310 FAM135BQ49AJ0 1406 aa18.69■□□□□ 0.58
HDAC1-208ENST00000482310 TOM1O60784 492 aa18.69■□□□□ 0.58
HDAC1-208ENST00000482310 HIRIP3Q9BW71 556 aaPredicted RBP18.69■□□□□ 0.58
HDAC1-208ENST00000482310 MINK1Q8N4C8 1332 aaPredicted RBP18.69■□□□□ 0.58
HDAC1-208ENST00000482310 CENPJQ9HC77 1338 aaPredicted RBP18.68■□□□□ 0.58
HDAC1-208ENST00000482310 FMN2Q9NZ56 1722 aa18.66■□□□□ 0.58
HDAC1-208ENST00000482310 ADGRL3Q9HAR2 1447 aa18.66■□□□□ 0.58
HDAC1-208ENST00000482310 ADGRB2O60241 1585 aa18.64■□□□□ 0.58
HDAC1-208ENST00000482310 ST20-MTHFSA0A0A6YYL1 179 aa18.64■□□□□ 0.57
HDAC1-208ENST00000482310 MSH6P52701 1360 aa18.64■□□□□ 0.57
HDAC1-208ENST00000482310 HSPA5P11021 654 aaKnown RBP18.63■□□□□ 0.57
HDAC1-208ENST00000482310 CDC42BPGQ6DT37 1551 aa18.63■□□□□ 0.57
HDAC1-208ENST00000482310 NUTM2FA1L443 756 aa18.62■□□□□ 0.57
HDAC1-208ENST00000482310 EIF4G2P78344 907 aaKnown RBP eCLIP18.62■□□□□ 0.57
HDAC1-208ENST00000482310 TULP4Q9NRJ4 1543 aa18.62■□□□□ 0.57
HDAC1-208ENST00000482310 SIRT1Q96EB6 747 aa18.61■□□□□ 0.57
HDAC1-208ENST00000482310 ITSN1Q15811 1721 aa18.59■□□□□ 0.57
HDAC1-208ENST00000482310 USP32Q8NFA0 1604 aa18.59■□□□□ 0.57
HDAC1-208ENST00000482310 NCOA3Q9Y6Q9 1424 aa18.58■□□□□ 0.57
HDAC1-208ENST00000482310 ATF3P18847 181 aa18.58■□□□□ 0.56
HDAC1-208ENST00000482310 C19orf44Q9H6X5 657 aa18.57■□□□□ 0.56
HDAC1-208ENST00000482310 POLR3GLQ9BT43 218 aa18.55■□□□□ 0.56
HDAC1-208ENST00000482310 TOPAZ1Q8N9V7 1692 aa18.54■□□□□ 0.56
HDAC1-208ENST00000482310 WASLO00401 505 aaPredicted RBP18.54■□□□□ 0.56
HDAC1-208ENST00000482310 SRPK2P78362 688 aaKnown RBP18.54■□□□□ 0.56
HDAC1-208ENST00000482310 TESK2Q96S53 571 aa18.54■□□□□ 0.56
HDAC1-208ENST00000482310 CDK19Q9BWU1 502 aa18.54■□□□□ 0.56
HDAC1-208ENST00000482310 CABP2Q9NPB3 220 aa18.54■□□□□ 0.56
HDAC1-208ENST00000482310 DCCP43146 1447 aa18.54■□□□□ 0.56
HDAC1-208ENST00000482310 ROBO1Q9Y6N7 1651 aa18.54■□□□□ 0.56
HDAC1-208ENST00000482310 EVC2Q86UK5 1308 aa18.53■□□□□ 0.56
HDAC1-208ENST00000482310 MST1RQ04912 1400 aa18.53■□□□□ 0.56
HDAC1-208ENST00000482310 CADPS2Q86UW7 1296 aa18.52■□□□□ 0.56
HDAC1-208ENST00000482310 RGS17Q9UGC6 210 aaPredicted RBP18.52■□□□□ 0.56
HDAC1-208ENST00000482310 SBNO2Q9Y2G9 1366 aa18.52■□□□□ 0.55
HDAC1-208ENST00000482310 ATP7BP35670 1465 aa18.51■□□□□ 0.55
HDAC1-208ENST00000482310 TMF1P82094 1093 aa18.5■□□□□ 0.55
HDAC1-208ENST00000482310 MYOM1P52179 1685 aa18.5■□□□□ 0.55
HDAC1-208ENST00000482310 PRR36Q9H6K5 1346 aa18.49■□□□□ 0.55
HDAC1-208ENST00000482310 C1orf167Q5SNV9 1468 aa18.49■□□□□ 0.55
HDAC1-208ENST00000482310 KIF1AQ12756 1690 aa18.48■□□□□ 0.55
HDAC1-208ENST00000482310 ESCO1Q5FWF5 840 aa18.47■□□□□ 0.55
HDAC1-208ENST00000482310 SLAIN2Q9P270 581 aa18.47■□□□□ 0.55
HDAC1-208ENST00000482310 AKAP12Q02952 1782 aa18.46■□□□□ 0.55
HDAC1-208ENST00000482310 NUDT16Q96DE0 195 aaKnown RBP18.46■□□□□ 0.55
HDAC1-208ENST00000482310 ORAI2Q96SN7 254 aa18.46■□□□□ 0.55
HDAC1-208ENST00000482310 PHF23Q9BUL5 403 aaPredicted RBP18.46■□□□□ 0.55
HDAC1-208ENST00000482310 ANKARQ7Z5J8 1434 aa18.46■□□□□ 0.55
HDAC1-208ENST00000482310 C11orf95C9JLR9 678 aaPredicted RBP18.45■□□□□ 0.54
HDAC1-208ENST00000482310 PMFBP1Q8TBY8 1022 aa18.45■□□□□ 0.54
HDAC1-208ENST00000482310 PPIP5K1Q6PFW1 1433 aa18.45■□□□□ 0.54
HDAC1-208ENST00000482310 PHLPP1O60346 1717 aa18.45■□□□□ 0.54
HDAC1-208ENST00000482310 TMC1Q8TDI8 760 aa18.44■□□□□ 0.54
HDAC1-208ENST00000482310 NHSL1Q5SYE7 1610 aa18.44■□□□□ 0.54
HDAC1-208ENST00000482310 DDX17Q92841 729 aaKnown RBP18.42■□□□□ 0.54
HDAC1-208ENST00000482310 ATAD2Q6PL18 1390 aa18.42■□□□□ 0.54
HDAC1-208ENST00000482310 BRINP3Q76B58 766 aa18.41■□□□□ 0.54
HDAC1-208ENST00000482310 KIF7Q2M1P5 1343 aa18.41■□□□□ 0.54
HDAC1-208ENST00000482310 SLC24A1O60721 1099 aa18.4■□□□□ 0.54
HDAC1-208ENST00000482310 XPCQ01831 940 aaPredicted RBP18.4■□□□□ 0.54
HDAC1-208ENST00000482310 PHF8Q9UPP1 1060 aa18.4■□□□□ 0.54
HDAC1-208ENST00000482310 MON2Q7Z3U7 1717 aa18.4■□□□□ 0.54
HDAC1-208ENST00000482310 CDCA8Q53HL2 280 aa18.39■□□□□ 0.53
HDAC1-208ENST00000482310 CABP1Q9NZU7 370 aa18.39■□□□□ 0.53
HDAC1-208ENST00000482310 CCDC61Q9Y6R9 512 aa18.39■□□□□ 0.53
HDAC1-208ENST00000482310 NGDNQ8NEJ9 315 aaKnown RBP18.38■□□□□ 0.53
HDAC1-208ENST00000482310 FOXO3O43524 673 aa18.37■□□□□ 0.53
HDAC1-208ENST00000482310 SLC12A5Q9H2X9 1139 aa18.37■□□□□ 0.53
HDAC1-208ENST00000482310 CCDC7Q96M83 1385 aa18.37■□□□□ 0.53
HDAC1-208ENST00000482310 WASHC2AQ641Q2 1341 aa18.36■□□□□ 0.53
HDAC1-208ENST00000482310 POTEAQ6S8J7 498 aa18.36■□□□□ 0.53
HDAC1-208ENST00000482310 TRPM3Q9HCF6 1732 aaPredicted RBP18.35■□□□□ 0.53
HDAC1-208ENST00000482310 AHDC1Q5TGY3 1603 aaPredicted RBP18.35■□□□□ 0.53
HDAC1-208ENST00000482310 ACEP12821 1306 aa18.35■□□□□ 0.53
HDAC1-208ENST00000482310 NRKQ7Z2Y5 1582 aa18.34■□□□□ 0.53
HDAC1-208ENST00000482310 KIF20BQ96Q89 1820 aa18.34■□□□□ 0.53
HDAC1-208ENST00000482310 COL16A1Q07092 1604 aaPredicted RBP18.34■□□□□ 0.53
HDAC1-208ENST00000482310 CD163L1Q9NR16 1453 aa18.33■□□□□ 0.53
HDAC1-208ENST00000482310 A0A1W2PP64 1363 aa18.32■□□□□ 0.52
HDAC1-208ENST00000482310 PSME1Q06323 249 aa18.32■□□□□ 0.52
HDAC1-208ENST00000482310 PXDNQ92626 1479 aa18.32■□□□□ 0.52
HDAC1-208ENST00000482310 NPHP3Q7Z494 1330 aa18.31■□□□□ 0.52
HDAC1-208ENST00000482310 PLEKHG3A1L390 1219 aa18.31■□□□□ 0.52
HDAC1-208ENST00000482310 PLEKHG5O94827 1062 aa18.31■□□□□ 0.52
HDAC1-208ENST00000482310 PUS7Q96PZ0 661 aaKnown RBP18.31■□□□□ 0.52
HDAC1-208ENST00000482310 POLR3AO14802 1390 aaPredicted RBP18.3■□□□□ 0.52
HDAC1-208ENST00000482310 KTN1Q86UP2 1357 aaKnown RBP18.3■□□□□ 0.52
HDAC1-208ENST00000482310 ZNF316A6NFI3 1004 aaPredicted RBP18.3■□□□□ 0.52
HDAC1-208ENST00000482310 PAK3O75914 559 aaPredicted RBP18.3■□□□□ 0.52
HDAC1-208ENST00000482310 KRT28Q7Z3Y7 464 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms