RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 DIEXFQ68CQ4 756 aaKnown RBP17.37■□□□□ 0.37
IFT88-206ENST00000482172 CHD2O14647 1828 aaKnown RBP17.37■□□□□ 0.37
IFT88-206ENST00000482172 ROBO2Q9HCK4 1378 aa17.36■□□□□ 0.37
IFT88-206ENST00000482172 STRCQ7RTU9 1775 aa17.35■□□□□ 0.37
IFT88-206ENST00000482172 DDX10Q13206 875 aaKnown RBP17.35■□□□□ 0.37
IFT88-206ENST00000482172 EVC2Q86UK5 1308 aa17.35■□□□□ 0.37
IFT88-206ENST00000482172 KCNA6P17658 529 aa17.34■□□□□ 0.37
IFT88-206ENST00000482172 NWD1Q149M9 1564 aa17.34■□□□□ 0.37
IFT88-206ENST00000482172 WAPLQ7Z5K2 1190 aa17.34■□□□□ 0.37
IFT88-206ENST00000482172 PLEKHH1Q9ULM0 1364 aa17.34■□□□□ 0.37
IFT88-206ENST00000482172 TULP4Q9NRJ4 1543 aa17.31■□□□□ 0.36
IFT88-206ENST00000482172 SAFB2Q14151 953 aaKnown RBP eCLIP17.31■□□□□ 0.36
IFT88-206ENST00000482172 DMRT2Q9Y5R5 561 aa17.31■□□□□ 0.36
IFT88-206ENST00000482172 MINK1Q8N4C8 1332 aaPredicted RBP17.3■□□□□ 0.36
IFT88-206ENST00000482172 ADGRB2O60241 1585 aa17.3■□□□□ 0.36
IFT88-206ENST00000482172 POLR3GLQ9BT43 218 aa17.29■□□□□ 0.36
IFT88-206ENST00000482172 NKTRP30414 1462 aaKnown RBP17.29■□□□□ 0.36
IFT88-206ENST00000482172 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.27■□□□□ 0.35
IFT88-206ENST00000482172 ATAD2Q6PL18 1390 aa17.27■□□□□ 0.35
IFT88-206ENST00000482172 WASLO00401 505 aaPredicted RBP17.26■□□□□ 0.35
IFT88-206ENST00000482172 CDK19Q9BWU1 502 aa17.26■□□□□ 0.35
IFT88-206ENST00000482172 NINLQ9Y2I6 1382 aa17.26■□□□□ 0.35
IFT88-206ENST00000482172 SRPK2P78362 688 aaKnown RBP17.24■□□□□ 0.35
IFT88-206ENST00000482172 MYOM1P52179 1685 aa17.23■□□□□ 0.35
IFT88-206ENST00000482172 NCOA3Q9Y6Q9 1424 aa17.23■□□□□ 0.35
IFT88-206ENST00000482172 MAPK8IP2Q13387 824 aaPredicted RBP17.23■□□□□ 0.35
IFT88-206ENST00000482172 CABP2Q9NPB3 220 aa17.23■□□□□ 0.35
IFT88-206ENST00000482172 PANK3Q9H999 370 aa17.21■□□□□ 0.35
IFT88-206ENST00000482172 ADGRL3Q9HAR2 1447 aa17.21■□□□□ 0.34
IFT88-206ENST00000482172 PROSER2Q86WR7 435 aaPredicted RBP17.2■□□□□ 0.34
IFT88-206ENST00000482172 STRCP1A6NGW2 1772 aa17.2■□□□□ 0.34
IFT88-206ENST00000482172 PER1O15534 1290 aaPredicted RBP17.19■□□□□ 0.34
IFT88-206ENST00000482172 CDC42BPGQ6DT37 1551 aa17.19■□□□□ 0.34
IFT88-206ENST00000482172 SCAF1Q9H7N4 1312 aaKnown RBP17.19■□□□□ 0.34
IFT88-206ENST00000482172 NALCNQ8IZF0 1738 aa17.18■□□□□ 0.34
IFT88-206ENST00000482172 ANKARQ7Z5J8 1434 aa17.17■□□□□ 0.34
IFT88-206ENST00000482172 TMC1Q8TDI8 760 aa17.17■□□□□ 0.34
IFT88-206ENST00000482172 NUDT16Q96DE0 195 aaKnown RBP17.17■□□□□ 0.34
IFT88-206ENST00000482172 SLC12A5Q9H2X9 1139 aa17.17■□□□□ 0.34
IFT88-206ENST00000482172 CCDC61Q9Y6R9 512 aa17.17■□□□□ 0.34
IFT88-206ENST00000482172 ATP7BP35670 1465 aa17.17■□□□□ 0.34
IFT88-206ENST00000482172 ANKRD36BQ8N2N9 1353 aa17.16■□□□□ 0.34
IFT88-206ENST00000482172 ANP32CO43423 234 aa17.16■□□□□ 0.34
IFT88-206ENST00000482172 FMN2Q9NZ56 1722 aa17.16■□□□□ 0.34
IFT88-206ENST00000482172 TMEM94Q12767 1356 aa17.15■□□□□ 0.34
IFT88-206ENST00000482172 C19orf44Q9H6X5 657 aa17.14■□□□□ 0.33
IFT88-206ENST00000482172 TERF2IPQ9NYB0 399 aa17.14■□□□□ 0.33
IFT88-206ENST00000482172 ZNF335Q9H4Z2 1342 aaPredicted RBP17.14■□□□□ 0.33
IFT88-206ENST00000482172 PRR36Q9H6K5 1346 aa17.14■□□□□ 0.33
IFT88-206ENST00000482172 DCCP43146 1447 aa17.13■□□□□ 0.33
IFT88-206ENST00000482172 PPIP5K1Q6PFW1 1433 aa17.13■□□□□ 0.33
IFT88-206ENST00000482172 CABP1Q9NZU7 370 aa17.13■□□□□ 0.33
IFT88-206ENST00000482172 KNSTRNQ9Y448 316 aa17.13■□□□□ 0.33
IFT88-206ENST00000482172 TOPAZ1Q8N9V7 1692 aa17.13■□□□□ 0.33
IFT88-206ENST00000482172 NPC1L1Q9UHC9 1359 aa17.13■□□□□ 0.33
IFT88-206ENST00000482172 LRRC7Q96NW7 1537 aa17.12■□□□□ 0.33
IFT88-206ENST00000482172 USP32Q8NFA0 1604 aa17.12■□□□□ 0.33
IFT88-206ENST00000482172 PLEKHG3A1L390 1219 aa17.12■□□□□ 0.33
IFT88-206ENST00000482172 C14orf37Q86TY3 774 aa17.12■□□□□ 0.33
IFT88-206ENST00000482172 MIER1Q8N108 512 aa17.12■□□□□ 0.33
IFT88-206ENST00000482172 ITSN1Q15811 1721 aa17.12■□□□□ 0.33
IFT88-206ENST00000482172 KTN1Q86UP2 1357 aaKnown RBP17.12■□□□□ 0.33
IFT88-206ENST00000482172 CD163L1Q9NR16 1453 aa17.12■□□□□ 0.33
IFT88-206ENST00000482172 HDGFL2Q7Z4V5 671 aaPredicted RBP17.11■□□□□ 0.33
IFT88-206ENST00000482172 CARD14Q9BXL6 1004 aa17.11■□□□□ 0.33
IFT88-206ENST00000482172 RBM33Q96EV2 1170 aaKnown RBP17.1■□□□□ 0.33
IFT88-206ENST00000482172 A0A1W2PP64 1363 aa17.1■□□□□ 0.33
IFT88-206ENST00000482172 CPSF1Q10570 1443 aaKnown RBP17.1■□□□□ 0.33
IFT88-206ENST00000482172 ZNF692Q9BU19 519 aaPredicted RBP17.09■□□□□ 0.33
IFT88-206ENST00000482172 PRKRIP1Q9H875 184 aaPredicted RBP17.09■□□□□ 0.33
IFT88-206ENST00000482172 AMER1Q5JTC6 1135 aaPredicted RBP17.08■□□□□ 0.32
IFT88-206ENST00000482172 XIRP1Q702N8 1843 aaKnown RBP17.07■□□□□ 0.32
IFT88-206ENST00000482172 NSD3Q9BZ95 1437 aa17.07■□□□□ 0.32
IFT88-206ENST00000482172 MSH6P52701 1360 aa17.07■□□□□ 0.32
IFT88-206ENST00000482172 RALBP1Q15311 655 aa17.07■□□□□ 0.32
IFT88-206ENST00000482172 POLR3AO14802 1390 aaPredicted RBP17.06■□□□□ 0.32
IFT88-206ENST00000482172 ATF3P18847 181 aa17.06■□□□□ 0.32
IFT88-206ENST00000482172 CADPS2Q86UW7 1296 aa17.06■□□□□ 0.32
IFT88-206ENST00000482172 AKAP12Q02952 1782 aa17.06■□□□□ 0.32
IFT88-206ENST00000482172 NSD2O96028 1365 aa17.05■□□□□ 0.32
IFT88-206ENST00000482172 CGNL1Q0VF96 1302 aa17.05■□□□□ 0.32
IFT88-206ENST00000482172 NUTM2FA1L443 756 aa17.05■□□□□ 0.32
IFT88-206ENST00000482172 CCER2I3L3R5 266 aa17.05■□□□□ 0.32
IFT88-206ENST00000482172 RGPD8O14715 1765 aaPredicted RBP17.05■□□□□ 0.32
IFT88-206ENST00000482172 EDC4Q6P2E9 1401 aaKnown RBP17.04■□□□□ 0.32
IFT88-206ENST00000482172 PARD3Q8TEW0 1356 aa17.04■□□□□ 0.32
IFT88-206ENST00000482172 LTBP4Q8N2S1 1624 aa17.04■□□□□ 0.32
IFT88-206ENST00000482172 ACEP12821 1306 aa17.04■□□□□ 0.32
IFT88-206ENST00000482172 MON2Q7Z3U7 1717 aa17.04■□□□□ 0.32
IFT88-206ENST00000482172 MST1RQ04912 1400 aa17.03■□□□□ 0.32
IFT88-206ENST00000482172 BRD4O60885 1362 aaPredicted RBP17.02■□□□□ 0.32
IFT88-206ENST00000482172 C1orf167Q5SNV9 1468 aa17.02■□□□□ 0.32
IFT88-206ENST00000482172 PHF8Q9UPP1 1060 aa17.02■□□□□ 0.32
IFT88-206ENST00000482172 CC2D1BQ5T0F9 858 aaKnown RBP17.01■□□□□ 0.31
IFT88-206ENST00000482172 USP6P35125 1406 aa17.01■□□□□ 0.31
IFT88-206ENST00000482172 NGDNQ8NEJ9 315 aaKnown RBP17■□□□□ 0.31
IFT88-206ENST00000482172 KIF1AQ12756 1690 aa17■□□□□ 0.31
IFT88-206ENST00000482172 MYBBP1AQ9BQG0 1328 aaKnown RBP16.99■□□□□ 0.31
IFT88-206ENST00000482172 SSH2Q76I76 1423 aa16.99■□□□□ 0.31
IFT88-206ENST00000482172 ESCO1Q5FWF5 840 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms