RNA–Protein interactions for RNA: ENST00000482143.5

TSPAN1-207, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 827 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-207ENST00000482143 BRWD3Q6RI45 1802 aa19.63■□□□□ 0.73
TSPAN1-207ENST00000482143 MYOM2P54296 1465 aa19.63■□□□□ 0.73
TSPAN1-207ENST00000482143 RRBP1Q9P2E9 1410 aaKnown RBP19.63■□□□□ 0.73
TSPAN1-207ENST00000482143 NPHP3Q7Z494 1330 aa19.63■□□□□ 0.73
TSPAN1-207ENST00000482143 SF3B2Q13435 895 aaKnown RBP19.63■□□□□ 0.73
TSPAN1-207ENST00000482143 GJD4Q96KN9 370 aaPredicted RBP19.63■□□□□ 0.73
TSPAN1-207ENST00000482143 BCL9LQ86UU0 1499 aa19.62■□□□□ 0.73
TSPAN1-207ENST00000482143 BLMP54132 1417 aaPredicted RBP19.62■□□□□ 0.73
TSPAN1-207ENST00000482143 ROBO2Q9HCK4 1378 aa19.61■□□□□ 0.73
TSPAN1-207ENST00000482143 ESCO1Q5FWF5 840 aa19.61■□□□□ 0.73
TSPAN1-207ENST00000482143 LRP5O75197 1615 aa19.6■□□□□ 0.73
TSPAN1-207ENST00000482143 HFM1A2PYH4 1435 aa19.59■□□□□ 0.73
TSPAN1-207ENST00000482143 NAIPQ13075 1403 aa19.59■□□□□ 0.73
TSPAN1-207ENST00000482143 CDC42BPGQ6DT37 1551 aa19.58■□□□□ 0.73
TSPAN1-207ENST00000482143 XPCQ01831 940 aaPredicted RBP19.58■□□□□ 0.72
TSPAN1-207ENST00000482143 GLI3P10071 1580 aa19.57■□□□□ 0.72
TSPAN1-207ENST00000482143 PXDNQ92626 1479 aa19.57■□□□□ 0.72
TSPAN1-207ENST00000482143 VGFO15240 615 aaPredicted RBP19.57■□□□□ 0.72
TSPAN1-207ENST00000482143 LRPPRCP42704 1394 aaKnown RBP19.57■□□□□ 0.72
TSPAN1-207ENST00000482143 RALGAPBQ86X10 1494 aa19.56■□□□□ 0.72
TSPAN1-207ENST00000482143 DEFB132Q7Z7B7 95 aa19.56■□□□□ 0.72
TSPAN1-207ENST00000482143 FOXO3O43524 673 aa19.55■□□□□ 0.72
TSPAN1-207ENST00000482143 PPARGC1BQ86YN6 1023 aaKnown RBP19.54■□□□□ 0.72
TSPAN1-207ENST00000482143 UNC5CLQ8IV45 518 aa19.54■□□□□ 0.72
TSPAN1-207ENST00000482143 PPLO60437 1756 aa19.54■□□□□ 0.72
TSPAN1-207ENST00000482143 HAP1P54257 671 aaPredicted RBP19.53■□□□□ 0.72
TSPAN1-207ENST00000482143 PRAG1Q86YV5 1406 aa19.52■□□□□ 0.72
TSPAN1-207ENST00000482143 USP32Q8NFA0 1604 aa19.52■□□□□ 0.72
TSPAN1-207ENST00000482143 NUTM2FA1L443 756 aa19.51■□□□□ 0.71
TSPAN1-207ENST00000482143 CCDC9Q9Y3X0 531 aaKnown RBP19.51■□□□□ 0.71
TSPAN1-207ENST00000482143 KIF1AQ12756 1690 aa19.51■□□□□ 0.71
TSPAN1-207ENST00000482143 PLCH1Q4KWH8 1693 aa19.51■□□□□ 0.71
TSPAN1-207ENST00000482143 SLIT2O94813 1529 aa19.5■□□□□ 0.71
TSPAN1-207ENST00000482143 A0A0G2JS52 829 aa19.49■□□□□ 0.71
TSPAN1-207ENST00000482143 MYT1Q01538 1121 aa19.49■□□□□ 0.71
TSPAN1-207ENST00000482143 NWD2Q9ULI1 1742 aa19.48■□□□□ 0.71
TSPAN1-207ENST00000482143 SEPT12Q8IYM1 358 aa19.48■□□□□ 0.71
TSPAN1-207ENST00000482143 PSDA5PKW4 1024 aaPredicted RBP19.47■□□□□ 0.71
TSPAN1-207ENST00000482143 FMN2Q9NZ56 1722 aa19.46■□□□□ 0.71
TSPAN1-207ENST00000482143 PLEKHG5O94827 1062 aa19.46■□□□□ 0.71
TSPAN1-207ENST00000482143 RPGRIP1LQ68CZ1 1315 aa19.46■□□□□ 0.71
TSPAN1-207ENST00000482143 CCDC144AA2RUR9 1427 aa19.45■□□□□ 0.7
TSPAN1-207ENST00000482143 BAG6P46379 1132 aa19.45■□□□□ 0.7
TSPAN1-207ENST00000482143 KRT27Q7Z3Y8 459 aa19.45■□□□□ 0.7
TSPAN1-207ENST00000482143 STK26Q9P289 416 aa19.44■□□□□ 0.7
TSPAN1-207ENST00000482143 SPATA31A3Q5VYP0 1347 aa19.44■□□□□ 0.7
TSPAN1-207ENST00000482143 RGPD8O14715 1765 aaPredicted RBP19.44■□□□□ 0.7
TSPAN1-207ENST00000482143 IFT172Q9UG01 1749 aa19.43■□□□□ 0.7
TSPAN1-207ENST00000482143 RGPD1P0DJD0 1748 aa19.42■□□□□ 0.7
TSPAN1-207ENST00000482143 ABCA3Q99758 1704 aa19.42■□□□□ 0.7
TSPAN1-207ENST00000482143 VPS72Q15906 364 aa19.42■□□□□ 0.7
TSPAN1-207ENST00000482143 KNDC1Q76NI1 1749 aa19.42■□□□□ 0.7
TSPAN1-207ENST00000482143 KRT28Q7Z3Y7 464 aa19.41■□□□□ 0.7
TSPAN1-207ENST00000482143 HRCP23327 699 aa19.4■□□□□ 0.7
TSPAN1-207ENST00000482143 LMOD2Q6P5Q4 547 aa19.4■□□□□ 0.7
TSPAN1-207ENST00000482143 WAPLQ7Z5K2 1190 aa19.39■□□□□ 0.69
TSPAN1-207ENST00000482143 PSME1Q06323 249 aa19.38■□□□□ 0.69
TSPAN1-207ENST00000482143 TNS3Q68CZ2 1445 aa19.38■□□□□ 0.69
TSPAN1-207ENST00000482143 CABLES1Q8TDN4 633 aa19.38■□□□□ 0.69
TSPAN1-207ENST00000482143 TECPR2O15040 1411 aa19.34■□□□□ 0.69
TSPAN1-207ENST00000482143 FAM98CQ17RN3 349 aaKnown RBP19.34■□□□□ 0.69
TSPAN1-207ENST00000482143 NRAPQ86VF7 1730 aa19.34■□□□□ 0.69
TSPAN1-207ENST00000482143 SPATA31E1Q6ZUB1 1445 aa19.34■□□□□ 0.69
TSPAN1-207ENST00000482143 PLEKHH1Q9ULM0 1364 aa19.33■□□□□ 0.69
TSPAN1-207ENST00000482143 ONECUT3O60422 494 aaPredicted RBP19.33■□□□□ 0.68
TSPAN1-207ENST00000482143 EN1Q05925 392 aaPredicted RBP19.33■□□□□ 0.68
TSPAN1-207ENST00000482143 R3HDM1Q15032 1099 aaKnown RBP19.33■□□□□ 0.68
TSPAN1-207ENST00000482143 SLC4A1APQ9BWU0 796 aaKnown RBP19.33■□□□□ 0.68
TSPAN1-207ENST00000482143 ARHGEF10O15013 1369 aa19.32■□□□□ 0.68
TSPAN1-207ENST00000482143 PHF8Q9UPP1 1060 aa19.32■□□□□ 0.68
TSPAN1-207ENST00000482143 ADGRF5Q8IZF2 1346 aa19.31■□□□□ 0.68
TSPAN1-207ENST00000482143 TMEM132EQ6IEE7 984 aa19.31■□□□□ 0.68
TSPAN1-207ENST00000482143 TNS1Q9HBL0 1735 aaKnown RBP19.31■□□□□ 0.68
TSPAN1-207ENST00000482143 RGL3Q3MIN7 710 aa19.3■□□□□ 0.68
TSPAN1-207ENST00000482143 ABCC11Q96J66 1382 aa19.3■□□□□ 0.68
TSPAN1-207ENST00000482143 COL14A1Q05707 1796 aaKnown RBP19.29■□□□□ 0.68
TSPAN1-207ENST00000482143 ADGRB2O60241 1585 aa19.29■□□□□ 0.68
TSPAN1-207ENST00000482143 SBNO1A3KN83 1393 aa19.29■□□□□ 0.68
TSPAN1-207ENST00000482143 BTG4Q9NY30 223 aa19.28■□□□□ 0.68
TSPAN1-207ENST00000482143 YTHDC2Q9H6S0 1430 aaKnown RBP19.27■□□□□ 0.68
TSPAN1-207ENST00000482143 FAM83GA6ND36 823 aa19.27■□□□□ 0.68
TSPAN1-207ENST00000482143 FAM182BQ5T319 152 aa19.27■□□□□ 0.68
TSPAN1-207ENST00000482143 ANKRD30BQ9BXX2 1392 aa19.27■□□□□ 0.68
TSPAN1-207ENST00000482143 NRXN1Q9ULB1 1477 aa19.27■□□□□ 0.67
TSPAN1-207ENST00000482143 PIK3C2GO75747 1445 aa19.25■□□□□ 0.67
TSPAN1-207ENST00000482143 YY1P25490 414 aa19.25■□□□□ 0.67
TSPAN1-207ENST00000482143 THSD7AQ9UPZ6 1657 aa19.22■□□□□ 0.67
TSPAN1-207ENST00000482143 SAFB2Q14151 953 aaKnown RBP eCLIP19.22■□□□□ 0.67
TSPAN1-207ENST00000482143 EZH2Q15910 746 aaKnown RBP19.22■□□□□ 0.67
TSPAN1-207ENST00000482143 PMFBP1Q8TBY8 1022 aa19.22■□□□□ 0.67
TSPAN1-207ENST00000482143 TRPM3Q9HCF6 1732 aaPredicted RBP19.22■□□□□ 0.67
TSPAN1-207ENST00000482143 DISP2A7MBM2 1401 aa19.21■□□□□ 0.67
TSPAN1-207ENST00000482143 ALS2Q96Q42 1657 aa19.2■□□□□ 0.66
TSPAN1-207ENST00000482143 MPHOSPH9Q99550 1183 aa19.2■□□□□ 0.66
TSPAN1-207ENST00000482143 DCAF8L1A6NGE4 600 aa19.19■□□□□ 0.66
TSPAN1-207ENST00000482143 GPRASP1Q5JY77 1395 aa19.19■□□□□ 0.66
TSPAN1-207ENST00000482143 DHX57Q6P158 1386 aaKnown RBP19.19■□□□□ 0.66
TSPAN1-207ENST00000482143 SIRT1Q96EB6 747 aa19.18■□□□□ 0.66
TSPAN1-207ENST00000482143 SPATA31A5Q5VU36 1347 aa19.18■□□□□ 0.66
TSPAN1-207ENST00000482143 SPATA31A7Q8IWB4 1347 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms