RNA–Protein interactions for RNA: ENST00000482071.1

NCK1-208, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-208ENST00000482071 RAB3GAP2Q9H2M9 1393 aa9.44□□□□□ -0.9
NCK1-208ENST00000482071 PLEKHH2Q8IVE3 1493 aa9.44□□□□□ -0.9
NCK1-208ENST00000482071 NCOA1Q15788 1441 aa9.43□□□□□ -0.9
NCK1-208ENST00000482071 DHX57Q6P158 1386 aaKnown RBP9.43□□□□□ -0.9
NCK1-208ENST00000482071 ACIN1Q9UKV3 1341 aaKnown RBP9.43□□□□□ -0.9
NCK1-208ENST00000482071 TYW1BQ6NUM6 668 aa9.43□□□□□ -0.9
NCK1-208ENST00000482071 MRPL50Q8N5N7 158 aaKnown RBP9.43□□□□□ -0.9
NCK1-208ENST00000482071 BBXQ8WY36 941 aaPredicted RBP9.43□□□□□ -0.9
NCK1-208ENST00000482071 FBXW7Q969H0 707 aa9.43□□□□□ -0.9
NCK1-208ENST00000482071 NBPF3Q9H094 633 aa9.43□□□□□ -0.9
NCK1-208ENST00000482071 ABCC1P33527 1531 aa9.42□□□□□ -0.9
NCK1-208ENST00000482071 COL9A1P20849 921 aa9.42□□□□□ -0.9
NCK1-208ENST00000482071 ZEB1P37275 1124 aaPredicted RBP9.42□□□□□ -0.9
NCK1-208ENST00000482071 PTPN5P54829 565 aa9.42□□□□□ -0.9
NCK1-208ENST00000482071 MAP3K4Q9Y6R4 1608 aa9.42□□□□□ -0.9
NCK1-208ENST00000482071 ARHGEF12Q9NZN5 1544 aa9.41□□□□□ -0.9
NCK1-208ENST00000482071 DPYSL4O14531 572 aa9.41□□□□□ -0.9
NCK1-208ENST00000482071 WNT2BQ93097 391 aa9.41□□□□□ -0.9
NCK1-208ENST00000482071 RABGEF1Q9UJ41 708 aa9.41□□□□□ -0.9
NCK1-208ENST00000482071 ARHGAP5Q13017 1502 aa9.41□□□□□ -0.9
NCK1-208ENST00000482071 CCDC141Q6ZP82 1450 aa9.4□□□□□ -0.9
NCK1-208ENST00000482071 PROX2Q3B8N5 592 aa9.4□□□□□ -0.9
NCK1-208ENST00000482071 EFCAB2Q5VUJ9 269 aa9.4□□□□□ -0.9
NCK1-208ENST00000482071 CYB5RLQ6IPT4 315 aa9.4□□□□□ -0.9
NCK1-208ENST00000482071 KDM6BO15054 1643 aa9.39□□□□□ -0.91
NCK1-208ENST00000482071 PLXNC1O60486 1568 aa9.39□□□□□ -0.91
NCK1-208ENST00000482071 CFAP74Q9C0B2 1584 aa9.39□□□□□ -0.91
NCK1-208ENST00000482071 IFFO2Q5TF58 517 aa9.39□□□□□ -0.91
NCK1-208ENST00000482071 SYCP2Q9BX26 1530 aa9.38□□□□□ -0.91
NCK1-208ENST00000482071 GOLGA8CPA6NN73 597 aa9.38□□□□□ -0.91
NCK1-208ENST00000482071 ITGAEP38570 1179 aa9.38□□□□□ -0.91
NCK1-208ENST00000482071 EPAS1Q99814 870 aa9.38□□□□□ -0.91
NCK1-208ENST00000482071 RTEL1-TNFRSF6BF6WH68 1400 aa9.38□□□□□ -0.91
NCK1-208ENST00000482071 DIP2BQ9P265 1576 aa9.37□□□□□ -0.91
NCK1-208ENST00000482071 FANCAO15360 1455 aa9.37□□□□□ -0.91
NCK1-208ENST00000482071 C9orf84Q5VXU9 1444 aa9.37□□□□□ -0.91
NCK1-208ENST00000482071 DENND4BO75064 1496 aaPredicted RBP9.36□□□□□ -0.91
NCK1-208ENST00000482071 NEO1Q92859 1461 aa9.36□□□□□ -0.91
NCK1-208ENST00000482071 HNRNPMP52272 730 aaKnown RBP eCLIP9.36□□□□□ -0.91
NCK1-208ENST00000482071 CCER1Q8TC90 406 aaPredicted RBP9.36□□□□□ -0.91
NCK1-208ENST00000482071 CD109Q6YHK3 1445 aa9.36□□□□□ -0.91
NCK1-208ENST00000482071 ANKRD30AQ9BXX3 1397 aa9.36□□□□□ -0.91
NCK1-208ENST00000482071 KIF13AQ9H1H9 1805 aa9.35□□□□□ -0.91
NCK1-208ENST00000482071 C6orf132Q5T0Z8 1188 aa9.35□□□□□ -0.91
NCK1-208ENST00000482071 INO80Q9ULG1 1556 aaPredicted RBP9.35□□□□□ -0.91
NCK1-208ENST00000482071 TRAPPC8Q9Y2L5 1435 aa9.35□□□□□ -0.91
NCK1-208ENST00000482071 PPRC1Q5VV67 1664 aaKnown RBP9.35□□□□□ -0.91
NCK1-208ENST00000482071 KDM5DQ9BY66 1539 aa9.35□□□□□ -0.91
NCK1-208ENST00000482071 KDM5CP41229 1560 aa9.34□□□□□ -0.91
NCK1-208ENST00000482071 ONECUT3O60422 494 aaPredicted RBP9.34□□□□□ -0.91
NCK1-208ENST00000482071 LAPTM4BQ86VI4 370 aa9.34□□□□□ -0.91
NCK1-208ENST00000482071 ZNF777Q9ULD5 760 aaPredicted RBP9.34□□□□□ -0.91
NCK1-208ENST00000482071 TSPY4P0CV99 314 aa9.33□□□□□ -0.92
NCK1-208ENST00000482071 TSPY10P0CW01 314 aa9.33□□□□□ -0.92
NCK1-208ENST00000482071 PDIA6Q15084 440 aa9.33□□□□□ -0.92
NCK1-208ENST00000482071 RRP7BPQ9NSQ0 103 aa9.33□□□□□ -0.92
NCK1-208ENST00000482071 CHIC2Q9UKJ5 165 aa9.33□□□□□ -0.92
NCK1-208ENST00000482071 KIDINS220Q9ULH0 1771 aa9.32□□□□□ -0.92
NCK1-208ENST00000482071 SPRYD3Q8NCJ5 442 aa9.32□□□□□ -0.92
NCK1-208ENST00000482071 KIAA1468Q9P260 1216 aa9.32□□□□□ -0.92
NCK1-208ENST00000482071 ANKRD50Q9ULJ7 1429 aa9.31□□□□□ -0.92
NCK1-208ENST00000482071 ZFYVE16Q7Z3T8 1539 aa9.31□□□□□ -0.92
NCK1-208ENST00000482071 DUOX2Q9NRD8 1548 aa9.31□□□□□ -0.92
NCK1-208ENST00000482071 RICTORQ6R327 1708 aa9.31□□□□□ -0.92
NCK1-208ENST00000482071 ANKK1Q8NFD2 765 aa9.31□□□□□ -0.92
NCK1-208ENST00000482071 DDX12PQ92771 950 aa9.31□□□□□ -0.92
NCK1-208ENST00000482071 ADGRL1O94910 1474 aa9.31□□□□□ -0.92
NCK1-208ENST00000482071 MAGI2Q86UL8 1455 aa9.31□□□□□ -0.92
NCK1-208ENST00000482071 MLH3Q9UHC1 1453 aa9.31□□□□□ -0.92
NCK1-208ENST00000482071 UNC13BO14795 1591 aa9.31□□□□□ -0.92
NCK1-208ENST00000482071 SCAPERQ9BY12 1400 aa9.31□□□□□ -0.92
NCK1-208ENST00000482071 PZPP20742 1482 aa9.3□□□□□ -0.92
NCK1-208ENST00000482071 ZNF518AQ6AHZ1 1483 aa9.3□□□□□ -0.92
NCK1-208ENST00000482071 TRIM6-TRIM34B2RNG4 842 aa9.3□□□□□ -0.92
NCK1-208ENST00000482071 AMER1Q5JTC6 1135 aaPredicted RBP9.3□□□□□ -0.92
NCK1-208ENST00000482071 BCORL1Q5H9F3 1711 aa9.3□□□□□ -0.92
NCK1-208ENST00000482071 KIF15Q9NS87 1388 aa9.29□□□□□ -0.92
NCK1-208ENST00000482071 SOWAHBA6NEL2 793 aa9.29□□□□□ -0.92
NCK1-208ENST00000482071 RGS20O76081 388 aa9.29□□□□□ -0.92
NCK1-208ENST00000482071 EN1Q05925 392 aaPredicted RBP9.29□□□□□ -0.92
NCK1-208ENST00000482071 RBM33Q96EV2 1170 aaKnown RBP9.29□□□□□ -0.92
NCK1-208ENST00000482071 ZFRQ96KR1 1074 aaKnown RBP9.29□□□□□ -0.92
NCK1-208ENST00000482071 TIMELESSQ9UNS1 1208 aa9.29□□□□□ -0.92
NCK1-208ENST00000482071 DEPDC5O75140 1603 aa9.29□□□□□ -0.92
NCK1-208ENST00000482071 ATP7AQ04656 1500 aa9.29□□□□□ -0.92
NCK1-208ENST00000482071 POGZQ7Z3K3 1410 aa9.29□□□□□ -0.92
NCK1-208ENST00000482071 ERBINQ96RT1 1412 aa9.29□□□□□ -0.92
NCK1-208ENST00000482071 EIF2AK4Q9P2K8 1649 aaKnown RBP9.28□□□□□ -0.92
NCK1-208ENST00000482071 A0A0G2JS52 829 aa9.28□□□□□ -0.92
NCK1-208ENST00000482071 BCAMP50895 628 aa9.28□□□□□ -0.92
NCK1-208ENST00000482071 ARIH1Q9Y4X5 557 aaPredicted RBP9.28□□□□□ -0.92
NCK1-208ENST00000482071 ZMYM4Q5VZL5 1548 aa9.27□□□□□ -0.93
NCK1-208ENST00000482071 SPDYE16A6NNV3 312 aaPredicted RBP9.27□□□□□ -0.93
NCK1-208ENST00000482071 ITGBL1O95965 494 aaPredicted RBP9.27□□□□□ -0.93
NCK1-208ENST00000482071 NBR1Q14596 966 aa9.27□□□□□ -0.93
NCK1-208ENST00000482071 AFAP1Q8N556 730 aa9.27□□□□□ -0.93
NCK1-208ENST00000482071 MPHOSPH9Q99550 1183 aa9.27□□□□□ -0.93
NCK1-208ENST00000482071 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.27□□□□□ -0.93
NCK1-208ENST00000482071 SEPT9Q9UHD8 586 aaPredicted RBP9.27□□□□□ -0.93
NCK1-208ENST00000482071 FRMPD1Q5SYB0 1578 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms