RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 BLMP54132 1417 aaPredicted RBP22.94■■□□□ 1.26
HDAC6-224ENST00000481929 CLTCL1P53675 1640 aa22.93■■□□□ 1.26
HDAC6-224ENST00000481929 MARF1Q9Y4F3 1742 aaKnown RBP22.92■■□□□ 1.26
HDAC6-224ENST00000481929 HFM1A2PYH4 1435 aa22.91■■□□□ 1.26
HDAC6-224ENST00000481929 PRAG1Q86YV5 1406 aa22.91■■□□□ 1.26
HDAC6-224ENST00000481929 ESCO1Q5FWF5 840 aa22.9■■□□□ 1.26
HDAC6-224ENST00000481929 PXDNQ92626 1479 aa22.9■■□□□ 1.26
HDAC6-224ENST00000481929 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.89■■□□□ 1.26
HDAC6-224ENST00000481929 KIF1BO60333 1816 aa22.88■■□□□ 1.25
HDAC6-224ENST00000481929 VGFO15240 615 aaPredicted RBP22.88■■□□□ 1.25
HDAC6-224ENST00000481929 ITGAEP38570 1179 aa22.88■■□□□ 1.25
HDAC6-224ENST00000481929 RALGAPBQ86X10 1494 aa22.87■■□□□ 1.25
HDAC6-224ENST00000481929 SF3B2Q13435 895 aaKnown RBP22.87■■□□□ 1.25
HDAC6-224ENST00000481929 CDC42BPGQ6DT37 1551 aa22.87■■□□□ 1.25
HDAC6-224ENST00000481929 XPCQ01831 940 aaPredicted RBP22.86■■□□□ 1.25
HDAC6-224ENST00000481929 DEFB132Q7Z7B7 95 aa22.86■■□□□ 1.25
HDAC6-224ENST00000481929 UNC5CLQ8IV45 518 aa22.86■■□□□ 1.25
HDAC6-224ENST00000481929 GLI3P10071 1580 aa22.85■■□□□ 1.25
HDAC6-224ENST00000481929 FOXO3O43524 673 aa22.85■■□□□ 1.25
HDAC6-224ENST00000481929 LRP5O75197 1615 aa22.85■■□□□ 1.25
HDAC6-224ENST00000481929 LRPPRCP42704 1394 aaKnown RBP22.85■■□□□ 1.25
HDAC6-224ENST00000481929 SLIT2O94813 1529 aa22.83■■□□□ 1.25
HDAC6-224ENST00000481929 BRWD3Q6RI45 1802 aa22.79■■□□□ 1.24
HDAC6-224ENST00000481929 RPGRIP1LQ68CZ1 1315 aa22.79■■□□□ 1.24
HDAC6-224ENST00000481929 NAIPQ13075 1403 aa22.78■■□□□ 1.24
HDAC6-224ENST00000481929 SEPT12Q8IYM1 358 aa22.78■■□□□ 1.24
HDAC6-224ENST00000481929 USP32Q8NFA0 1604 aa22.76■■□□□ 1.23
HDAC6-224ENST00000481929 NUTM2FA1L443 756 aa22.76■■□□□ 1.23
HDAC6-224ENST00000481929 SPATA31A3Q5VYP0 1347 aa22.76■■□□□ 1.23
HDAC6-224ENST00000481929 HAP1P54257 671 aaPredicted RBP22.73■■□□□ 1.23
HDAC6-224ENST00000481929 VPS72Q15906 364 aa22.73■■□□□ 1.23
HDAC6-224ENST00000481929 CCDC144AA2RUR9 1427 aa22.73■■□□□ 1.23
HDAC6-224ENST00000481929 PPLO60437 1756 aa22.72■■□□□ 1.23
HDAC6-224ENST00000481929 PSDA5PKW4 1024 aaPredicted RBP22.72■■□□□ 1.23
HDAC6-224ENST00000481929 KRT27Q7Z3Y8 459 aa22.72■■□□□ 1.23
HDAC6-224ENST00000481929 CCDC9Q9Y3X0 531 aaKnown RBP22.72■■□□□ 1.23
HDAC6-224ENST00000481929 BAG6P46379 1132 aa22.71■■□□□ 1.23
HDAC6-224ENST00000481929 KIF1AQ12756 1690 aa22.71■■□□□ 1.23
HDAC6-224ENST00000481929 HRCP23327 699 aa22.7■■□□□ 1.22
HDAC6-224ENST00000481929 TECPR2O15040 1411 aa22.69■■□□□ 1.22
HDAC6-224ENST00000481929 ONECUT3O60422 494 aaPredicted RBP22.69■■□□□ 1.22
HDAC6-224ENST00000481929 KRT28Q7Z3Y7 464 aa22.69■■□□□ 1.22
HDAC6-224ENST00000481929 WAPLQ7Z5K2 1190 aa22.69■■□□□ 1.22
HDAC6-224ENST00000481929 STK26Q9P289 416 aa22.68■■□□□ 1.22
HDAC6-224ENST00000481929 NWD2Q9ULI1 1742 aa22.67■■□□□ 1.22
HDAC6-224ENST00000481929 PLCH1Q4KWH8 1693 aa22.67■■□□□ 1.22
HDAC6-224ENST00000481929 TNS3Q68CZ2 1445 aa22.66■■□□□ 1.22
HDAC6-224ENST00000481929 FMN2Q9NZ56 1722 aa22.66■■□□□ 1.22
HDAC6-224ENST00000481929 A0A0G2JS52 829 aa22.66■■□□□ 1.22
HDAC6-224ENST00000481929 MYT1Q01538 1121 aa22.66■■□□□ 1.22
HDAC6-224ENST00000481929 CABLES1Q8TDN4 633 aa22.64■■□□□ 1.21
HDAC6-224ENST00000481929 PLEKHG5O94827 1062 aa22.63■■□□□ 1.21
HDAC6-224ENST00000481929 PSME1Q06323 249 aa22.63■■□□□ 1.21
HDAC6-224ENST00000481929 ABCC11Q96J66 1382 aa22.63■■□□□ 1.21
HDAC6-224ENST00000481929 PLEKHH1Q9ULM0 1364 aa22.63■■□□□ 1.21
HDAC6-224ENST00000481929 RRBP1Q9P2E9 1410 aaKnown RBP22.62■■□□□ 1.21
HDAC6-224ENST00000481929 ADGRF5Q8IZF2 1346 aa22.61■■□□□ 1.21
HDAC6-224ENST00000481929 KNDC1Q76NI1 1749 aa22.61■■□□□ 1.21
HDAC6-224ENST00000481929 PHF8Q9UPP1 1060 aa22.6■■□□□ 1.21
HDAC6-224ENST00000481929 LMOD2Q6P5Q4 547 aa22.59■■□□□ 1.21
HDAC6-224ENST00000481929 SLC4A1APQ9BWU0 796 aaKnown RBP22.59■■□□□ 1.21
HDAC6-224ENST00000481929 ARHGEF10O15013 1369 aa22.59■■□□□ 1.21
HDAC6-224ENST00000481929 ABCA3Q99758 1704 aa22.58■■□□□ 1.21
HDAC6-224ENST00000481929 EN1Q05925 392 aaPredicted RBP22.58■■□□□ 1.21
HDAC6-224ENST00000481929 SBNO1A3KN83 1393 aa22.58■■□□□ 1.21
HDAC6-224ENST00000481929 R3HDM1Q15032 1099 aaKnown RBP22.57■■□□□ 1.2
HDAC6-224ENST00000481929 FAM98CQ17RN3 349 aaKnown RBP22.57■■□□□ 1.2
HDAC6-224ENST00000481929 TMEM132EQ6IEE7 984 aa22.57■■□□□ 1.2
HDAC6-224ENST00000481929 RGPD1P0DJD0 1748 aa22.56■■□□□ 1.2
HDAC6-224ENST00000481929 ANKRD30BQ9BXX2 1392 aa22.55■■□□□ 1.2
HDAC6-224ENST00000481929 FAM83GA6ND36 823 aa22.55■■□□□ 1.2
HDAC6-224ENST00000481929 IFT172Q9UG01 1749 aa22.54■■□□□ 1.2
HDAC6-224ENST00000481929 YTHDC2Q9H6S0 1430 aaKnown RBP22.54■■□□□ 1.2
HDAC6-224ENST00000481929 NRXN1Q9ULB1 1477 aa22.54■■□□□ 1.2
HDAC6-224ENST00000481929 RGL3Q3MIN7 710 aa22.53■■□□□ 1.2
HDAC6-224ENST00000481929 PPARGC1BQ86YN6 1023 aaKnown RBP22.53■■□□□ 1.2
HDAC6-224ENST00000481929 NRAPQ86VF7 1730 aa22.53■■□□□ 1.2
HDAC6-224ENST00000481929 DISP2A7MBM2 1401 aa22.52■■□□□ 1.2
HDAC6-224ENST00000481929 RGPD8O14715 1765 aaPredicted RBP22.52■■□□□ 1.2
HDAC6-224ENST00000481929 BTG4Q9NY30 223 aa22.51■■□□□ 1.19
HDAC6-224ENST00000481929 PIK3C2GO75747 1445 aa22.5■■□□□ 1.19
HDAC6-224ENST00000481929 FAM182BQ5T319 152 aa22.5■■□□□ 1.19
HDAC6-224ENST00000481929 SIRT1Q96EB6 747 aa22.5■■□□□ 1.19
HDAC6-224ENST00000481929 SPATA31E1Q6ZUB1 1445 aa22.48■■□□□ 1.19
HDAC6-224ENST00000481929 COL14A1Q05707 1796 aaKnown RBP22.47■■□□□ 1.19
HDAC6-224ENST00000481929 TNS1Q9HBL0 1735 aaKnown RBP22.46■■□□□ 1.19
HDAC6-224ENST00000481929 EZH2Q15910 746 aaKnown RBP22.46■■□□□ 1.19
HDAC6-224ENST00000481929 ADGRB2O60241 1585 aa22.46■■□□□ 1.19
HDAC6-224ENST00000481929 YY1P25490 414 aa22.45■■□□□ 1.18
HDAC6-224ENST00000481929 PMFBP1Q8TBY8 1022 aa22.45■■□□□ 1.18
HDAC6-224ENST00000481929 SPATA31A5Q5VU36 1347 aa22.45■■□□□ 1.18
HDAC6-224ENST00000481929 SPATA31A7Q8IWB4 1347 aa22.45■■□□□ 1.18
HDAC6-224ENST00000481929 THSD7AQ9UPZ6 1657 aa22.43■■□□□ 1.18
HDAC6-224ENST00000481929 ANKARQ7Z5J8 1434 aa22.43■■□□□ 1.18
HDAC6-224ENST00000481929 DHX57Q6P158 1386 aaKnown RBP22.42■■□□□ 1.18
HDAC6-224ENST00000481929 SAFB2Q14151 953 aaKnown RBP eCLIP22.42■■□□□ 1.18
HDAC6-224ENST00000481929 CAMKK2Q96RR4 588 aa22.41■■□□□ 1.18
HDAC6-224ENST00000481929 GPRASP1Q5JY77 1395 aa22.4■■□□□ 1.18
HDAC6-224ENST00000481929 PRAM1Q96QH2 718 aa22.4■■□□□ 1.18
HDAC6-224ENST00000481929 TRPM3Q9HCF6 1732 aaPredicted RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms