RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 BMP1P13497 986 aa6.11□□□□□ -1.43
USH2A-204ENST00000481786 FECHP22830 423 aa6.11□□□□□ -1.43
USH2A-204ENST00000481786 RDH13Q8NBN7 331 aa6.1□□□□□ -1.43
USH2A-204ENST00000481786 FAM181BA6NEQ2 426 aa6.09□□□□□ -1.43
USH2A-204ENST00000481786 ATP6V1AP38606 617 aa6.09□□□□□ -1.43
USH2A-204ENST00000481786 SKOR1P84550 965 aa6.09□□□□□ -1.43
USH2A-204ENST00000481786 TRIM46Q7Z4K8 759 aa6.09□□□□□ -1.43
USH2A-204ENST00000481786 METTL3Q86U44 580 aaKnown RBP6.09□□□□□ -1.43
USH2A-204ENST00000481786 SLC16A10Q8TF71 515 aa6.09□□□□□ -1.43
USH2A-204ENST00000481786 KIFC2Q96AC6 838 aa6.09□□□□□ -1.43
USH2A-204ENST00000481786 DDX11L8A8MPP1 907 aa6.08□□□□□ -1.44
USH2A-204ENST00000481786 CFAP44Q96MT7 982 aa6.08□□□□□ -1.44
USH2A-204ENST00000481786 H3BM21 787 aa6.06□□□□□ -1.44
USH2A-204ENST00000481786 FCHSD2O94868 740 aa6.06□□□□□ -1.44
USH2A-204ENST00000481786 OATP04181 439 aa6.06□□□□□ -1.44
USH2A-204ENST00000481786 GCGRP47871 477 aa6.06□□□□□ -1.44
USH2A-204ENST00000481786 MSS51Q4VC12 460 aa6.06□□□□□ -1.44
USH2A-204ENST00000481786 RC3H1Q5TC82 1133 aaKnown RBP6.06□□□□□ -1.44
USH2A-204ENST00000481786 RSPH4AQ5TD94 716 aa6.06□□□□□ -1.44
USH2A-204ENST00000481786 PAXIP1Q6ZW49 1069 aaPredicted RBP6.06□□□□□ -1.44
USH2A-204ENST00000481786 KCTD17Q8N5Z5 321 aa6.06□□□□□ -1.44
USH2A-204ENST00000481786 KCNV2Q8TDN2 545 aa6.06□□□□□ -1.44
USH2A-204ENST00000481786 IRF7Q92985 503 aa6.06□□□□□ -1.44
USH2A-204ENST00000481786 ALDH1A1P00352 501 aa6.05□□□□□ -1.44
USH2A-204ENST00000481786 GSK3AP49840 483 aa6.05□□□□□ -1.44
USH2A-204ENST00000481786 ARHGEF1Q92888 912 aaKnown RBP6.04□□□□□ -1.44
USH2A-204ENST00000481786 PHOX2BQ99453 314 aa6.04□□□□□ -1.44
USH2A-204ENST00000481786 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.04□□□□□ -1.44
USH2A-204ENST00000481786 DAXXQ9UER7 740 aaPredicted RBP6.04□□□□□ -1.44
USH2A-204ENST00000481786 SALL2Q9Y467 1007 aaPredicted RBP6.04□□□□□ -1.44
USH2A-204ENST00000481786 MMP16P51512 607 aa6.03□□□□□ -1.44
USH2A-204ENST00000481786 CCDC24Q8N4L8 307 aa6.03□□□□□ -1.44
USH2A-204ENST00000481786 SOBPA7XYQ1 873 aa6.02□□□□□ -1.45
USH2A-204ENST00000481786 HLA-CQ95604 372 aa6.02□□□□□ -1.45
USH2A-204ENST00000481786 CAPN5O15484 640 aaPredicted RBP6.01□□□□□ -1.45
USH2A-204ENST00000481786 ZFP42Q96MM3 310 aa6.01□□□□□ -1.45
USH2A-204ENST00000481786 SEMA3EO15041 775 aa6□□□□□ -1.45
USH2A-204ENST00000481786 SIAH2O43255 324 aa6□□□□□ -1.45
USH2A-204ENST00000481786 DXOO77932 396 aaKnown RBP6□□□□□ -1.45
USH2A-204ENST00000481786 REPIN1Q9BWE0 567 aaKnown RBP6□□□□□ -1.45
USH2A-204ENST00000481786 RBM26Q5T8P6 1007 aaKnown RBP5.99□□□□□ -1.45
USH2A-204ENST00000481786 NPAS3Q8IXF0 933 aa5.99□□□□□ -1.45
USH2A-204ENST00000481786 HIC1Q14526 733 aa5.98□□□□□ -1.45
USH2A-204ENST00000481786 PTCRAQ6ISU1 281 aaPredicted RBP5.98□□□□□ -1.45
USH2A-204ENST00000481786 WNT7BP56706 349 aa5.97□□□□□ -1.45
USH2A-204ENST00000481786 USB1Q9BQ65 265 aaKnown RBP5.97□□□□□ -1.45
USH2A-204ENST00000481786 GPR37O15354 613 aa5.96□□□□□ -1.46
USH2A-204ENST00000481786 KCNMA1Q12791 1236 aa5.96□□□□□ -1.46
USH2A-204ENST00000481786 SYMPKQ92797 1274 aaKnown RBP5.95□□□□□ -1.46
USH2A-204ENST00000481786 GNPATO15228 680 aa5.94□□□□□ -1.46
USH2A-204ENST00000481786 GUCA2AQ02747 115 aa5.94□□□□□ -1.46
USH2A-204ENST00000481786 Q3C1V9 767 aa5.94□□□□□ -1.46
USH2A-204ENST00000481786 SULF1Q8IWU6 871 aa5.94□□□□□ -1.46
USH2A-204ENST00000481786 EHBP1Q8NDI1 1231 aa5.94□□□□□ -1.46
USH2A-204ENST00000481786 WASF2Q9Y6W5 498 aa5.94□□□□□ -1.46
USH2A-204ENST00000481786 PURBQ96QR8 312 aaKnown RBP5.93□□□□□ -1.46
USH2A-204ENST00000481786 TSHZ2Q9NRE2 1034 aa5.93□□□□□ -1.46
USH2A-204ENST00000481786 TLL2Q9Y6L7 1015 aa5.93□□□□□ -1.46
USH2A-204ENST00000481786 VSIG8P0DPA2 414 aa5.92□□□□□ -1.46
USH2A-204ENST00000481786 SH3BP2P78314 561 aa5.92□□□□□ -1.46
USH2A-204ENST00000481786 RASSF7Q02833 373 aa5.92□□□□□ -1.46
USH2A-204ENST00000481786 GRIPAP1Q4V328 841 aa5.92□□□□□ -1.46
USH2A-204ENST00000481786 TMEM151AQ8N4L1 468 aa5.92□□□□□ -1.46
USH2A-204ENST00000481786 GDF11O95390 407 aa5.91□□□□□ -1.46
USH2A-204ENST00000481786 CD46P15529 392 aa5.91□□□□□ -1.46
USH2A-204ENST00000481786 PLCB2Q00722 1185 aa5.91□□□□□ -1.46
USH2A-204ENST00000481786 KRT76Q01546 638 aa5.9□□□□□ -1.46
USH2A-204ENST00000481786 MRPL14Q6P1L8 145 aaKnown RBP5.9□□□□□ -1.46
USH2A-204ENST00000481786 KDM4AO75164 1064 aa5.89□□□□□ -1.47
USH2A-204ENST00000481786 JUNDP17535 347 aa5.88□□□□□ -1.47
USH2A-204ENST00000481786 NNTQ13423 1086 aa5.88□□□□□ -1.47
USH2A-204ENST00000481786 LINC01559Q495D7 138 aa5.88□□□□□ -1.47
USH2A-204ENST00000481786 GPR161Q8N6U8 529 aaKnown RBP5.88□□□□□ -1.47
USH2A-204ENST00000481786 NUDT12Q9BQG2 462 aa5.88□□□□□ -1.47
USH2A-204ENST00000481786 HOXA2O43364 376 aa5.87□□□□□ -1.47
USH2A-204ENST00000481786 PPFIA3O75145 1194 aa5.87□□□□□ -1.47
USH2A-204ENST00000481786 TIMP2P16035 220 aa5.87□□□□□ -1.47
USH2A-204ENST00000481786 ADAMTS8Q9UP79 889 aa5.87□□□□□ -1.47
USH2A-204ENST00000481786 WDR4P57081 412 aaKnown RBP5.86□□□□□ -1.47
USH2A-204ENST00000481786 BAP1Q92560 729 aa5.86□□□□□ -1.47
USH2A-204ENST00000481786 KLF16Q9BXK1 252 aaPredicted RBP5.86□□□□□ -1.47
USH2A-204ENST00000481786 TESPA1A2RU30 521 aaPredicted RBP5.85□□□□□ -1.47
USH2A-204ENST00000481786 C6orf118Q5T5N4 469 aa5.85□□□□□ -1.47
USH2A-204ENST00000481786 XP32Q5T750 250 aa5.85□□□□□ -1.47
USH2A-204ENST00000481786 GPAT2Q6NUI2 795 aa5.85□□□□□ -1.47
USH2A-204ENST00000481786 ZFAND3Q9H8U3 227 aa5.85□□□□□ -1.47
USH2A-204ENST00000481786 SCARF1Q14162 830 aa5.84□□□□□ -1.47
USH2A-204ENST00000481786 CNTNAP3BQ96NU0 1288 aa5.84□□□□□ -1.47
USH2A-204ENST00000481786 CNTNAP3Q9BZ76 1288 aa5.84□□□□□ -1.47
USH2A-204ENST00000481786 MAN1A2O60476 641 aa5.83□□□□□ -1.48
USH2A-204ENST00000481786 WHAMMQ8TF30 809 aa5.83□□□□□ -1.48
USH2A-204ENST00000481786 UNC93B1Q9H1C4 597 aa5.82□□□□□ -1.48
USH2A-204ENST00000481786 PCDHGC3Q9UN70 934 aa5.82□□□□□ -1.48
USH2A-204ENST00000481786 IRS1P35568 1242 aa5.81□□□□□ -1.48
USH2A-204ENST00000481786 MDM2Q00987 491 aaPredicted RBP5.81□□□□□ -1.48
USH2A-204ENST00000481786 ZNF385CQ66K41 422 aaPredicted RBP5.81□□□□□ -1.48
USH2A-204ENST00000481786 DNMT3LQ9UJW3 386 aa5.81□□□□□ -1.48
USH2A-204ENST00000481786 ADH1CP00326 375 aa5.8□□□□□ -1.48
USH2A-204ENST00000481786 NR3C2P08235 984 aa5.8□□□□□ -1.48
USH2A-204ENST00000481786 CCNYL3P0C7X3 344 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms