RNA–Protein interactions for RNA: ENST00000481606.1

TFE3-202, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-202ENST00000481606 SOS2Q07890 1332 aaPredicted RBP8.41□□□□□ -1.06
TFE3-202ENST00000481606 ORAI2Q96SN7 254 aa8.41□□□□□ -1.06
TFE3-202ENST00000481606 USP21Q9UK80 565 aa8.41□□□□□ -1.06
TFE3-202ENST00000481606 PPLO60437 1756 aa8.4□□□□□ -1.06
TFE3-202ENST00000481606 MYOM2P54296 1465 aa8.4□□□□□ -1.06
TFE3-202ENST00000481606 CNKSR2Q8WXI2 1034 aa8.4□□□□□ -1.06
TFE3-202ENST00000481606 TRPC5Q9UL62 973 aaPredicted RBP8.4□□□□□ -1.06
TFE3-202ENST00000481606 HFM1A2PYH4 1435 aa8.39□□□□□ -1.07
TFE3-202ENST00000481606 PXDNQ92626 1479 aa8.38□□□□□ -1.07
TFE3-202ENST00000481606 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.38□□□□□ -1.07
TFE3-202ENST00000481606 FNBP4Q8N3X1 1017 aaPredicted RBP8.38□□□□□ -1.07
TFE3-202ENST00000481606 NPHP3Q7Z494 1330 aa8.37□□□□□ -1.07
TFE3-202ENST00000481606 VGFO15240 615 aaPredicted RBP8.37□□□□□ -1.07
TFE3-202ENST00000481606 PPARGC1BQ86YN6 1023 aaKnown RBP8.37□□□□□ -1.07
TFE3-202ENST00000481606 ZRANB1Q9UGI0 708 aa8.37□□□□□ -1.07
TFE3-202ENST00000481606 BCL9LQ86UU0 1499 aa8.37□□□□□ -1.07
TFE3-202ENST00000481606 NAIPQ13075 1403 aa8.37□□□□□ -1.07
TFE3-202ENST00000481606 XPCQ01831 940 aaPredicted RBP8.36□□□□□ -1.07
TFE3-202ENST00000481606 MAPK8IP2Q13387 824 aaPredicted RBP8.36□□□□□ -1.07
TFE3-202ENST00000481606 ESCO1Q5FWF5 840 aa8.36□□□□□ -1.07
TFE3-202ENST00000481606 KNDC1Q76NI1 1749 aa8.36□□□□□ -1.07
TFE3-202ENST00000481606 KIF1AQ12756 1690 aa8.36□□□□□ -1.07
TFE3-202ENST00000481606 USP32Q8NFA0 1604 aa8.36□□□□□ -1.07
TFE3-202ENST00000481606 GLI3P10071 1580 aa8.35□□□□□ -1.07
TFE3-202ENST00000481606 FMN2Q9NZ56 1722 aa8.35□□□□□ -1.07
TFE3-202ENST00000481606 RRBP1Q9P2E9 1410 aaKnown RBP8.35□□□□□ -1.07
TFE3-202ENST00000481606 IFT172Q9UG01 1749 aa8.34□□□□□ -1.07
TFE3-202ENST00000481606 RPGRIP1LQ68CZ1 1315 aa8.34□□□□□ -1.07
TFE3-202ENST00000481606 BRWD3Q6RI45 1802 aa8.34□□□□□ -1.07
TFE3-202ENST00000481606 SLIT2O94813 1529 aa8.34□□□□□ -1.08
TFE3-202ENST00000481606 PLCH1Q4KWH8 1693 aa8.34□□□□□ -1.08
TFE3-202ENST00000481606 RALGAPBQ86X10 1494 aa8.33□□□□□ -1.08
TFE3-202ENST00000481606 NUTM2FA1L443 756 aa8.33□□□□□ -1.08
TFE3-202ENST00000481606 TECPR2O15040 1411 aa8.33□□□□□ -1.08
TFE3-202ENST00000481606 FOXO3O43524 673 aa8.33□□□□□ -1.08
TFE3-202ENST00000481606 GJD4Q96KN9 370 aaPredicted RBP8.33□□□□□ -1.08
TFE3-202ENST00000481606 ABCA3Q99758 1704 aa8.33□□□□□ -1.08
TFE3-202ENST00000481606 LRPPRCP42704 1394 aaKnown RBP8.33□□□□□ -1.08
TFE3-202ENST00000481606 CCDC144AA2RUR9 1427 aa8.32□□□□□ -1.08
TFE3-202ENST00000481606 BLMP54132 1417 aaPredicted RBP8.32□□□□□ -1.08
TFE3-202ENST00000481606 CCDC125Q86Z20 511 aa8.32□□□□□ -1.08
TFE3-202ENST00000481606 STK26Q9P289 416 aa8.32□□□□□ -1.08
TFE3-202ENST00000481606 PLEKHH1Q9ULM0 1364 aa8.32□□□□□ -1.08
TFE3-202ENST00000481606 ADGRF5Q8IZF2 1346 aa8.31□□□□□ -1.08
TFE3-202ENST00000481606 WAPLQ7Z5K2 1190 aa8.31□□□□□ -1.08
TFE3-202ENST00000481606 LRP5O75197 1615 aa8.31□□□□□ -1.08
TFE3-202ENST00000481606 NWD2Q9ULI1 1742 aa8.31□□□□□ -1.08
TFE3-202ENST00000481606 SPATA31A3Q5VYP0 1347 aa8.3□□□□□ -1.08
TFE3-202ENST00000481606 RGPD8O14715 1765 aaPredicted RBP8.3□□□□□ -1.08
TFE3-202ENST00000481606 TNS3Q68CZ2 1445 aa8.3□□□□□ -1.08
TFE3-202ENST00000481606 UNC5CLQ8IV45 518 aa8.3□□□□□ -1.08
TFE3-202ENST00000481606 PIK3C2GO75747 1445 aa8.29□□□□□ -1.08
TFE3-202ENST00000481606 SPATA31E1Q6ZUB1 1445 aa8.29□□□□□ -1.08
TFE3-202ENST00000481606 PLEKHG5O94827 1062 aa8.29□□□□□ -1.08
TFE3-202ENST00000481606 HAP1P54257 671 aaPredicted RBP8.29□□□□□ -1.08
TFE3-202ENST00000481606 DEFB132Q7Z7B7 95 aa8.29□□□□□ -1.08
TFE3-202ENST00000481606 ABCC11Q96J66 1382 aa8.29□□□□□ -1.08
TFE3-202ENST00000481606 ANKRD30BQ9BXX2 1392 aa8.29□□□□□ -1.08
TFE3-202ENST00000481606 NRAPQ86VF7 1730 aa8.29□□□□□ -1.08
TFE3-202ENST00000481606 YTHDC2Q9H6S0 1430 aaKnown RBP8.29□□□□□ -1.08
TFE3-202ENST00000481606 NPM3O75607 178 aaKnown RBP8.28□□□□□ -1.08
TFE3-202ENST00000481606 SF3B2Q13435 895 aaKnown RBP8.28□□□□□ -1.08
TFE3-202ENST00000481606 TMEM132EQ6IEE7 984 aa8.28□□□□□ -1.08
TFE3-202ENST00000481606 SEPT12Q8IYM1 358 aa8.28□□□□□ -1.08
TFE3-202ENST00000481606 RGL3Q3MIN7 710 aa8.27□□□□□ -1.09
TFE3-202ENST00000481606 KRT28Q7Z3Y7 464 aa8.27□□□□□ -1.09
TFE3-202ENST00000481606 CCDC9Q9Y3X0 531 aaKnown RBP8.27□□□□□ -1.09
TFE3-202ENST00000481606 NRXN1Q9ULB1 1477 aa8.26□□□□□ -1.09
TFE3-202ENST00000481606 A0A0G2JS52 829 aa8.26□□□□□ -1.09
TFE3-202ENST00000481606 MYT1Q01538 1121 aa8.26□□□□□ -1.09
TFE3-202ENST00000481606 VPS72Q15906 364 aa8.26□□□□□ -1.09
TFE3-202ENST00000481606 CABLES1Q8TDN4 633 aa8.26□□□□□ -1.09
TFE3-202ENST00000481606 RGPD1P0DJD0 1748 aa8.26□□□□□ -1.09
TFE3-202ENST00000481606 SBNO1A3KN83 1393 aa8.25□□□□□ -1.09
TFE3-202ENST00000481606 ARHGEF10O15013 1369 aa8.25□□□□□ -1.09
TFE3-202ENST00000481606 LMOD2Q6P5Q4 547 aa8.25□□□□□ -1.09
TFE3-202ENST00000481606 PHF8Q9UPP1 1060 aa8.25□□□□□ -1.09
TFE3-202ENST00000481606 ADGRB2O60241 1585 aa8.25□□□□□ -1.09
TFE3-202ENST00000481606 TRPM3Q9HCF6 1732 aaPredicted RBP8.25□□□□□ -1.09
TFE3-202ENST00000481606 PSDA5PKW4 1024 aaPredicted RBP8.24□□□□□ -1.09
TFE3-202ENST00000481606 PSME1Q06323 249 aa8.24□□□□□ -1.09
TFE3-202ENST00000481606 KRT27Q7Z3Y8 459 aa8.24□□□□□ -1.09
TFE3-202ENST00000481606 COL14A1Q05707 1796 aaKnown RBP8.24□□□□□ -1.09
TFE3-202ENST00000481606 ALS2Q96Q42 1657 aa8.24□□□□□ -1.09
TFE3-202ENST00000481606 TNS1Q9HBL0 1735 aaKnown RBP8.23□□□□□ -1.09
TFE3-202ENST00000481606 CRYBG1Q9Y4K1 1723 aa8.23□□□□□ -1.09
TFE3-202ENST00000481606 ANKARQ7Z5J8 1434 aa8.23□□□□□ -1.09
TFE3-202ENST00000481606 BAG6P46379 1132 aa8.23□□□□□ -1.09
TFE3-202ENST00000481606 SAFB2Q14151 953 aaKnown RBP eCLIP8.23□□□□□ -1.09
TFE3-202ENST00000481606 EP400Q96L91 3159 aa8.23□□□□□ -1.09
TFE3-202ENST00000481606 DLC1Q96QB1 1528 aa8.23□□□□□ -1.09
TFE3-202ENST00000481606 DHX57Q6P158 1386 aaKnown RBP8.22□□□□□ -1.09
TFE3-202ENST00000481606 THSD7AQ9UPZ6 1657 aa8.22□□□□□ -1.09
TFE3-202ENST00000481606 FAM98CQ17RN3 349 aaKnown RBP8.22□□□□□ -1.09
TFE3-202ENST00000481606 PRAM1Q96QH2 718 aa8.22□□□□□ -1.09
TFE3-202ENST00000481606 ONECUT3O60422 494 aaPredicted RBP8.21□□□□□ -1.1
TFE3-202ENST00000481606 CFAP70Q5T0N1 1121 aa8.21□□□□□ -1.1
TFE3-202ENST00000481606 PMFBP1Q8TBY8 1022 aa8.21□□□□□ -1.1
TFE3-202ENST00000481606 SIRT1Q96EB6 747 aa8.21□□□□□ -1.1
TFE3-202ENST00000481606 MPHOSPH9Q99550 1183 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms