RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 BCL9LQ86UU0 1499 aa26.42■■□□□ 1.82
RXRB-203ENST00000481441 PXDNQ92626 1479 aa26.42■■□□□ 1.82
RXRB-203ENST00000481441 CDC42BPGQ6DT37 1551 aa26.42■■□□□ 1.82
RXRB-203ENST00000481441 ZRANB1Q9UGI0 708 aa26.41■■□□□ 1.82
RXRB-203ENST00000481441 PPLO60437 1756 aa26.41■■□□□ 1.82
RXRB-203ENST00000481441 RPGRIP1LQ68CZ1 1315 aa26.4■■□□□ 1.82
RXRB-203ENST00000481441 FOXD1Q16676 465 aa26.39■■□□□ 1.82
RXRB-203ENST00000481441 NPHP3Q7Z494 1330 aa26.39■■□□□ 1.82
RXRB-203ENST00000481441 NAIPQ13075 1403 aa26.38■■□□□ 1.81
RXRB-203ENST00000481441 ESCO1Q5FWF5 840 aa26.38■■□□□ 1.81
RXRB-203ENST00000481441 CCDC125Q86Z20 511 aa26.37■■□□□ 1.81
RXRB-203ENST00000481441 EP400Q96L91 3159 aa26.37■■□□□ 1.81
RXRB-203ENST00000481441 PPARGC1BQ86YN6 1023 aaKnown RBP26.36■■□□□ 1.81
RXRB-203ENST00000481441 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.34■■□□□ 1.81
RXRB-203ENST00000481441 GJD4Q96KN9 370 aaPredicted RBP26.34■■□□□ 1.81
RXRB-203ENST00000481441 FOXO3O43524 673 aa26.33■■□□□ 1.81
RXRB-203ENST00000481441 XPCQ01831 940 aaPredicted RBP26.32■■□□□ 1.8
RXRB-203ENST00000481441 GLI3P10071 1580 aa26.28■■□□□ 1.8
RXRB-203ENST00000481441 LRPPRCP42704 1394 aaKnown RBP26.28■■□□□ 1.8
RXRB-203ENST00000481441 TECPR2O15040 1411 aa26.27■■□□□ 1.8
RXRB-203ENST00000481441 RRBP1Q9P2E9 1410 aaKnown RBP26.27■■□□□ 1.8
RXRB-203ENST00000481441 SLIT2O94813 1529 aa26.27■■□□□ 1.8
RXRB-203ENST00000481441 RALGAPBQ86X10 1494 aa26.26■■□□□ 1.79
RXRB-203ENST00000481441 UNC5CLQ8IV45 518 aa26.25■■□□□ 1.79
RXRB-203ENST00000481441 BRWD3Q6RI45 1802 aa26.25■■□□□ 1.79
RXRB-203ENST00000481441 WAPLQ7Z5K2 1190 aa26.24■■□□□ 1.79
RXRB-203ENST00000481441 SLC4A1APQ9BWU0 796 aaKnown RBP26.24■■□□□ 1.79
RXRB-203ENST00000481441 BLMP54132 1417 aaPredicted RBP26.23■■□□□ 1.79
RXRB-203ENST00000481441 ADGRF5Q8IZF2 1346 aa26.23■■□□□ 1.79
RXRB-203ENST00000481441 NUTM2FA1L443 756 aa26.23■■□□□ 1.79
RXRB-203ENST00000481441 FMN2Q9NZ56 1722 aa26.22■■□□□ 1.79
RXRB-203ENST00000481441 SPATA31A3Q5VYP0 1347 aa26.22■■□□□ 1.79
RXRB-203ENST00000481441 KNDC1Q76NI1 1749 aa26.22■■□□□ 1.79
RXRB-203ENST00000481441 KIF1AQ12756 1690 aa26.22■■□□□ 1.79
RXRB-203ENST00000481441 USP32Q8NFA0 1604 aa26.21■■□□□ 1.79
RXRB-203ENST00000481441 STK26Q9P289 416 aa26.2■■□□□ 1.79
RXRB-203ENST00000481441 IFT172Q9UG01 1749 aa26.19■■□□□ 1.78
RXRB-203ENST00000481441 ABCC11Q96J66 1382 aa26.19■■□□□ 1.78
RXRB-203ENST00000481441 PLEKHH1Q9ULM0 1364 aa26.19■■□□□ 1.78
RXRB-203ENST00000481441 CCDC144AA2RUR9 1427 aa26.17■■□□□ 1.78
RXRB-203ENST00000481441 DEFB132Q7Z7B7 95 aa26.15■■□□□ 1.78
RXRB-203ENST00000481441 SPATA31E1Q6ZUB1 1445 aa26.15■■□□□ 1.78
RXRB-203ENST00000481441 TMEM132EQ6IEE7 984 aa26.14■■□□□ 1.77
RXRB-203ENST00000481441 KRT28Q7Z3Y7 464 aa26.14■■□□□ 1.77
RXRB-203ENST00000481441 ANKRD30BQ9BXX2 1392 aa26.13■■□□□ 1.77
RXRB-203ENST00000481441 RGPD8O14715 1765 aaPredicted RBP26.13■■□□□ 1.77
RXRB-203ENST00000481441 SEPT12Q8IYM1 358 aa26.13■■□□□ 1.77
RXRB-203ENST00000481441 NWD2Q9ULI1 1742 aa26.12■■□□□ 1.77
RXRB-203ENST00000481441 PLCH1Q4KWH8 1693 aa26.12■■□□□ 1.77
RXRB-203ENST00000481441 VPS72Q15906 364 aa26.12■■□□□ 1.77
RXRB-203ENST00000481441 RGL3Q3MIN7 710 aa26.11■■□□□ 1.77
RXRB-203ENST00000481441 PIK3C2GO75747 1445 aa26.1■■□□□ 1.77
RXRB-203ENST00000481441 TNS3Q68CZ2 1445 aa26.1■■□□□ 1.77
RXRB-203ENST00000481441 YTHDC2Q9H6S0 1430 aaKnown RBP26.1■■□□□ 1.77
RXRB-203ENST00000481441 ONECUT3O60422 494 aaPredicted RBP26.1■■□□□ 1.77
RXRB-203ENST00000481441 ABCA3Q99758 1704 aa26.1■■□□□ 1.77
RXRB-203ENST00000481441 LRP5O75197 1615 aa26.09■■□□□ 1.77
RXRB-203ENST00000481441 SF3B2Q13435 895 aaKnown RBP26.08■■□□□ 1.77
RXRB-203ENST00000481441 CABLES1Q8TDN4 633 aa26.08■■□□□ 1.77
RXRB-203ENST00000481441 SIRT1Q96EB6 747 aa26.07■■□□□ 1.76
RXRB-203ENST00000481441 HAP1P54257 671 aaPredicted RBP26.06■■□□□ 1.76
RXRB-203ENST00000481441 PHF8Q9UPP1 1060 aa26.06■■□□□ 1.76
RXRB-203ENST00000481441 PSME1Q06323 249 aa26.05■■□□□ 1.76
RXRB-203ENST00000481441 KRT27Q7Z3Y8 459 aa26.04■■□□□ 1.76
RXRB-203ENST00000481441 SBNO1A3KN83 1393 aa26.04■■□□□ 1.76
RXRB-203ENST00000481441 NRXN1Q9ULB1 1477 aa26.04■■□□□ 1.76
RXRB-203ENST00000481441 CCDC9Q9Y3X0 531 aaKnown RBP26.01■■□□□ 1.75
RXRB-203ENST00000481441 ARHGEF10O15013 1369 aa26■■□□□ 1.75
RXRB-203ENST00000481441 PLEKHG5O94827 1062 aa26■■□□□ 1.75
RXRB-203ENST00000481441 FAM83GA6ND36 823 aa25.99■■□□□ 1.75
RXRB-203ENST00000481441 C14orf93Q9H972 538 aaKnown RBP25.99■■□□□ 1.75
RXRB-203ENST00000481441 NRAPQ86VF7 1730 aa25.99■■□□□ 1.75
RXRB-203ENST00000481441 LMOD2Q6P5Q4 547 aa25.97■■□□□ 1.75
RXRB-203ENST00000481441 MPHOSPH9Q99550 1183 aa25.96■■□□□ 1.75
RXRB-203ENST00000481441 PSDA5PKW4 1024 aaPredicted RBP25.94■■□□□ 1.74
RXRB-203ENST00000481441 BAG6P46379 1132 aa25.94■■□□□ 1.74
RXRB-203ENST00000481441 DHX57Q6P158 1386 aaKnown RBP25.94■■□□□ 1.74
RXRB-203ENST00000481441 CFAP70Q5T0N1 1121 aa25.93■■□□□ 1.74
RXRB-203ENST00000481441 TRPM3Q9HCF6 1732 aaPredicted RBP25.93■■□□□ 1.74
RXRB-203ENST00000481441 ANKARQ7Z5J8 1434 aa25.92■■□□□ 1.74
RXRB-203ENST00000481441 HRCP23327 699 aa25.92■■□□□ 1.74
RXRB-203ENST00000481441 PRAM1Q96QH2 718 aa25.92■■□□□ 1.74
RXRB-203ENST00000481441 SAFB2Q14151 953 aaKnown RBP eCLIP25.91■■□□□ 1.74
RXRB-203ENST00000481441 FAM98CQ17RN3 349 aaKnown RBP25.91■■□□□ 1.74
RXRB-203ENST00000481441 RGPD1P0DJD0 1748 aa25.91■■□□□ 1.74
RXRB-203ENST00000481441 A0A0G2JS52 829 aa25.9■■□□□ 1.74
RXRB-203ENST00000481441 MYT1Q01538 1121 aa25.9■■□□□ 1.74
RXRB-203ENST00000481441 PMFBP1Q8TBY8 1022 aa25.9■■□□□ 1.74
RXRB-203ENST00000481441 ALS2Q96Q42 1657 aa25.9■■□□□ 1.74
RXRB-203ENST00000481441 COL14A1Q05707 1796 aaKnown RBP25.9■■□□□ 1.74
RXRB-203ENST00000481441 DLC1Q96QB1 1528 aa25.9■■□□□ 1.74
RXRB-203ENST00000481441 BTG4Q9NY30 223 aa25.89■■□□□ 1.74
RXRB-203ENST00000481441 ADGRB2O60241 1585 aa25.89■■□□□ 1.74
RXRB-203ENST00000481441 EN1Q05925 392 aaPredicted RBP25.86■■□□□ 1.73
RXRB-203ENST00000481441 CRYBG1Q9Y4K1 1723 aa25.85■■□□□ 1.73
RXRB-203ENST00000481441 THSD7AQ9UPZ6 1657 aa25.84■■□□□ 1.73
RXRB-203ENST00000481441 TNS1Q9HBL0 1735 aaKnown RBP25.84■■□□□ 1.73
RXRB-203ENST00000481441 POGKQ9P215 609 aa25.84■■□□□ 1.73
RXRB-203ENST00000481441 SPATA31A5Q5VU36 1347 aa25.83■■□□□ 1.73
RXRB-203ENST00000481441 SPATA31A7Q8IWB4 1347 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms