RNA–Protein interactions for RNA: ENST00000481004.1

LINC02040-201, Transcript of long intergenic non-protein coding RNA 2040, humanhuman

TSL 5 BASIC

Gene LINC02040, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02040-201ENST00000481004 MAGI2Q86UL8 1455 aa9.01□□□□□ -0.97
LINC02040-201ENST00000481004 GPATCH8Q9UKJ3 1502 aaKnown RBP9□□□□□ -0.97
LINC02040-201ENST00000481004 FER1L4A9Z1Z3 1794 aa9□□□□□ -0.97
LINC02040-201ENST00000481004 KIDINS220Q9ULH0 1771 aa9□□□□□ -0.97
LINC02040-201ENST00000481004 LOC105371045A0A1W2PR82 267 aa9□□□□□ -0.97
LINC02040-201ENST00000481004 MAP3K7O43318 606 aa9□□□□□ -0.97
LINC02040-201ENST00000481004 RBM33Q96EV2 1170 aaKnown RBP9□□□□□ -0.97
LINC02040-201ENST00000481004 TIAM1Q13009 1591 aa8.99□□□□□ -0.97
LINC02040-201ENST00000481004 PSEN2P49810 448 aa8.99□□□□□ -0.97
LINC02040-201ENST00000481004 EN1Q05925 392 aaPredicted RBP8.99□□□□□ -0.97
LINC02040-201ENST00000481004 EFCAB2Q5VUJ9 269 aa8.99□□□□□ -0.97
LINC02040-201ENST00000481004 SMYD5Q6GMV2 418 aa8.99□□□□□ -0.97
LINC02040-201ENST00000481004 POTEEQ6S8J3 1075 aa8.99□□□□□ -0.97
LINC02040-201ENST00000481004 ANKRD13DQ6ZTN6 518 aa8.99□□□□□ -0.97
LINC02040-201ENST00000481004 AFAP1Q8N556 730 aa8.99□□□□□ -0.97
LINC02040-201ENST00000481004 CDK11AQ9UQ88 783 aaPredicted RBP8.99□□□□□ -0.97
LINC02040-201ENST00000481004 ZNF518AQ6AHZ1 1483 aa8.99□□□□□ -0.97
LINC02040-201ENST00000481004 ATP10AO60312 1499 aa8.98□□□□□ -0.97
LINC02040-201ENST00000481004 SEMA3EO15041 775 aa8.98□□□□□ -0.97
LINC02040-201ENST00000481004 SYCP2Q9BX26 1530 aa8.98□□□□□ -0.97
LINC02040-201ENST00000481004 PPP1R3GB7ZBB8 358 aa8.97□□□□□ -0.97
LINC02040-201ENST00000481004 MLLT3P42568 568 aaPredicted RBP8.97□□□□□ -0.97
LINC02040-201ENST00000481004 C6orf132Q5T0Z8 1188 aa8.97□□□□□ -0.97
LINC02040-201ENST00000481004 REREQ9P2R6 1566 aa8.97□□□□□ -0.97
LINC02040-201ENST00000481004 C9orf84Q5VXU9 1444 aa8.97□□□□□ -0.97
LINC02040-201ENST00000481004 LMTK3Q96Q04 1460 aa8.96□□□□□ -0.97
LINC02040-201ENST00000481004 MLH3Q9UHC1 1453 aa8.96□□□□□ -0.97
LINC02040-201ENST00000481004 OSBPP22059 807 aa8.96□□□□□ -0.98
LINC02040-201ENST00000481004 ARID4BQ4LE39 1312 aaPredicted RBP8.96□□□□□ -0.98
LINC02040-201ENST00000481004 EHBP1L1Q8N3D4 1523 aa8.95□□□□□ -0.98
LINC02040-201ENST00000481004 INO80Q9ULG1 1556 aaPredicted RBP8.95□□□□□ -0.98
LINC02040-201ENST00000481004 TK2O00142 265 aa8.95□□□□□ -0.98
LINC02040-201ENST00000481004 TULP1O00294 542 aaPredicted RBP8.95□□□□□ -0.98
LINC02040-201ENST00000481004 DMRTA1Q5VZB9 504 aa8.95□□□□□ -0.98
LINC02040-201ENST00000481004 TESPA1A2RU30 521 aaPredicted RBP8.94□□□□□ -0.98
LINC02040-201ENST00000481004 MLECQ14165 292 aa8.93□□□□□ -0.98
LINC02040-201ENST00000481004 ADGRD1Q6QNK2 874 aa8.93□□□□□ -0.98
LINC02040-201ENST00000481004 SLC4A5Q9BY07 1137 aa8.93□□□□□ -0.98
LINC02040-201ENST00000481004 ZNF644Q9H582 1327 aaPredicted RBP8.93□□□□□ -0.98
LINC02040-201ENST00000481004 PLXNC1O60486 1568 aa8.93□□□□□ -0.98
LINC02040-201ENST00000481004 C3P01024 1663 aa8.92□□□□□ -0.98
LINC02040-201ENST00000481004 AGLP35573 1532 aa8.92□□□□□ -0.98
LINC02040-201ENST00000481004 ATP7AQ04656 1500 aa8.92□□□□□ -0.98
LINC02040-201ENST00000481004 MBD5Q9P267 1494 aa8.92□□□□□ -0.98
LINC02040-201ENST00000481004 MTUS2Q5JR59 1369 aa8.92□□□□□ -0.98
LINC02040-201ENST00000481004 CERKQ8TCT0 537 aa8.92□□□□□ -0.98
LINC02040-201ENST00000481004 STAC3Q96MF2 364 aa8.92□□□□□ -0.98
LINC02040-201ENST00000481004 ZBED2Q9BTP6 218 aa8.92□□□□□ -0.98
LINC02040-201ENST00000481004 SUPT6HQ7KZ85 1726 aaKnown RBP8.91□□□□□ -0.98
LINC02040-201ENST00000481004 NCOA2Q15596 1464 aa8.91□□□□□ -0.98
LINC02040-201ENST00000481004 VPS8Q8N3P4 1428 aa8.91□□□□□ -0.98
LINC02040-201ENST00000481004 CCNB3Q8WWL7 1395 aa8.91□□□□□ -0.98
LINC02040-201ENST00000481004 COL9A1P20849 921 aa8.91□□□□□ -0.98
LINC02040-201ENST00000481004 HNRNPMP52272 730 aaKnown RBP eCLIP8.91□□□□□ -0.98
LINC02040-201ENST00000481004 TSR1Q2NL82 804 aaKnown RBP8.91□□□□□ -0.98
LINC02040-201ENST00000481004 ZNF777Q9ULD5 760 aaPredicted RBP8.91□□□□□ -0.98
LINC02040-201ENST00000481004 ADGBQ8N7X0 1667 aa8.91□□□□□ -0.98
LINC02040-201ENST00000481004 KIAA1107Q9UPP5 1409 aa8.9□□□□□ -0.98
LINC02040-201ENST00000481004 VPS9D1Q9Y2B5 631 aa8.9□□□□□ -0.98
LINC02040-201ENST00000481004 PREX1Q8TCU6 1659 aa8.9□□□□□ -0.98
LINC02040-201ENST00000481004 PRIM1P49642 420 aaKnown RBP8.89□□□□□ -0.99
LINC02040-201ENST00000481004 CEBPAP49715 358 aaPredicted RBP8.89□□□□□ -0.99
LINC02040-201ENST00000481004 CAMSAP2Q08AD1 1489 aa8.89□□□□□ -0.99
LINC02040-201ENST00000481004 LRRC9Q6ZRR7 1453 aa8.89□□□□□ -0.99
LINC02040-201ENST00000481004 NUTM2FA1L443 756 aa8.88□□□□□ -0.99
LINC02040-201ENST00000481004 HSPA2P54652 639 aa8.88□□□□□ -0.99
LINC02040-201ENST00000481004 NBPF3Q9H094 633 aa8.88□□□□□ -0.99
LINC02040-201ENST00000481004 CFDP1Q9UEE9 299 aaPredicted RBP8.88□□□□□ -0.99
LINC02040-201ENST00000481004 STRCQ7RTU9 1775 aa8.87□□□□□ -0.99
LINC02040-201ENST00000481004 KANK4Q5T7N3 995 aaPredicted RBP8.87□□□□□ -0.99
LINC02040-201ENST00000481004 MYT1LQ9UL68 1186 aa8.87□□□□□ -0.99
LINC02040-201ENST00000481004 PLEKHH2Q8IVE3 1493 aa8.87□□□□□ -0.99
LINC02040-201ENST00000481004 CLTCQ00610 1675 aaKnown RBP8.87□□□□□ -0.99
LINC02040-201ENST00000481004 SPAG9O60271 1321 aaKnown RBP8.86□□□□□ -0.99
LINC02040-201ENST00000481004 MAP3K1Q13233 1512 aa8.86□□□□□ -0.99
LINC02040-201ENST00000481004 MROH2AA6NES4 1674 aa8.86□□□□□ -0.99
LINC02040-201ENST00000481004 ONECUT3O60422 494 aaPredicted RBP8.86□□□□□ -0.99
LINC02040-201ENST00000481004 PROX2Q3B8N5 592 aa8.86□□□□□ -0.99
LINC02040-201ENST00000481004 CDHR5Q9HBB8 845 aa8.86□□□□□ -0.99
LINC02040-201ENST00000481004 A2MP01023 1474 aa8.85□□□□□ -0.99
LINC02040-201ENST00000481004 TRIM6-TRIM34B2RNG4 842 aa8.85□□□□□ -0.99
LINC02040-201ENST00000481004 HRO43593 1189 aa8.85□□□□□ -0.99
LINC02040-201ENST00000481004 RABGEF1Q9UJ41 708 aa8.85□□□□□ -0.99
LINC02040-201ENST00000481004 ARHGEF5Q12774 1597 aa8.85□□□□□ -0.99
LINC02040-201ENST00000481004 PRSS12P56730 875 aa8.84□□□□□ -0.99
LINC02040-201ENST00000481004 PACS2Q86VP3 889 aa8.84□□□□□ -0.99
LINC02040-201ENST00000481004 RBM27Q9P2N5 1060 aaKnown RBP8.84□□□□□ -0.99
LINC02040-201ENST00000481004 CCDC141Q6ZP82 1450 aa8.83□□□□□ -1
LINC02040-201ENST00000481004 FCHSD2O94868 740 aa8.83□□□□□ -1
LINC02040-201ENST00000481004 RBM26Q5T8P6 1007 aaKnown RBP8.83□□□□□ -1
LINC02040-201ENST00000481004 MRPL50Q8N5N7 158 aaKnown RBP8.83□□□□□ -1
LINC02040-201ENST00000481004 CDCA7LQ96GN5 454 aa8.83□□□□□ -1
LINC02040-201ENST00000481004 GOLGA8CPA6NN73 597 aa8.82□□□□□ -1
LINC02040-201ENST00000481004 RNF166Q96A37 237 aaPredicted RBP8.82□□□□□ -1
LINC02040-201ENST00000481004 KIAA1468Q9P260 1216 aa8.82□□□□□ -1
LINC02040-201ENST00000481004 CROCC2H7BZ55 1655 aa8.81□□□□□ -1
LINC02040-201ENST00000481004 RTEL1-TNFRSF6BF6WH68 1400 aa8.81□□□□□ -1
LINC02040-201ENST00000481004 MYO3AQ8NEV4 1616 aa8.81□□□□□ -1
LINC02040-201ENST00000481004 BHMG1C9JSJ3 638 aaPredicted RBP8.81□□□□□ -1
LINC02040-201ENST00000481004 PTGDRQ13258 359 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms