RNA–Protein interactions for RNA: ENST00000480911.5

CACNA1C-225, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5 BASIC

Gene CACNA1C, Length 6,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-225ENST00000480911 LMOD3Q0VAK6 560 aa11.38□□□□□ -0.59
CACNA1C-225ENST00000480911 MTERF4Q7Z6M4 381 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-225ENST00000480911 MAP7D2Q96T17 732 aa11.38□□□□□ -0.59
CACNA1C-225ENST00000480911 EPRSP07814 1512 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-225ENST00000480911 TSR1Q2NL82 804 aaKnown RBP11.37□□□□□ -0.59
CACNA1C-225ENST00000480911 FBXW7Q969H0 707 aa11.37□□□□□ -0.59
CACNA1C-225ENST00000480911 TRAK1Q9UPV9 953 aa11.37□□□□□ -0.59
CACNA1C-225ENST00000480911 COG3Q96JB2 828 aa11.37□□□□□ -0.59
CACNA1C-225ENST00000480911 SAMD1Q6SPF0 538 aaPredicted RBP11.36□□□□□ -0.59
CACNA1C-225ENST00000480911 ODF2Q5BJF6 829 aa11.36□□□□□ -0.59
CACNA1C-225ENST00000480911 RAPGEF4Q8WZA2 1011 aa11.36□□□□□ -0.59
CACNA1C-225ENST00000480911 ADAMTS2O95450 1211 aa11.35□□□□□ -0.59
CACNA1C-225ENST00000480911 ZNF428Q96B54 188 aa11.35□□□□□ -0.59
CACNA1C-225ENST00000480911 CIZ1Q9ULV3 898 aaPredicted RBP11.35□□□□□ -0.59
CACNA1C-225ENST00000480911 HDAC5Q9UQL6 1122 aa11.35□□□□□ -0.59
CACNA1C-225ENST00000480911 MAGI1Q96QZ7 1491 aaPredicted RBP11.35□□□□□ -0.59
CACNA1C-225ENST00000480911 MRE11P49959 708 aa11.35□□□□□ -0.59
CACNA1C-225ENST00000480911 NUP160Q12769 1436 aa11.35□□□□□ -0.59
CACNA1C-225ENST00000480911 ARHGEF12Q9NZN5 1544 aa11.35□□□□□ -0.59
CACNA1C-225ENST00000480911 KIF16BQ96L93 1317 aa11.34□□□□□ -0.59
CACNA1C-225ENST00000480911 NLRP2Q9NX02 1062 aa11.34□□□□□ -0.59
CACNA1C-225ENST00000480911 RNF123Q5XPI4 1314 aa11.34□□□□□ -0.59
CACNA1C-225ENST00000480911 LMTK3Q96Q04 1460 aa11.34□□□□□ -0.59
CACNA1C-225ENST00000480911 R3HCC1Q9Y3T6 440 aaKnown RBP11.34□□□□□ -0.59
CACNA1C-225ENST00000480911 DDX19BQ9UMR2 479 aa11.34□□□□□ -0.59
CACNA1C-225ENST00000480911 DHX29Q7Z478 1369 aaKnown RBP11.34□□□□□ -0.59
CACNA1C-225ENST00000480911 CFAP43Q8NDM7 1665 aa11.34□□□□□ -0.59
CACNA1C-225ENST00000480911 PANK3Q9H999 370 aa11.34□□□□□ -0.59
CACNA1C-225ENST00000480911 TPM2P07951 284 aa11.34□□□□□ -0.59
CACNA1C-225ENST00000480911 ZKSCAN2Q63HK3 967 aa11.33□□□□□ -0.6
CACNA1C-225ENST00000480911 PAXIP1Q6ZW49 1069 aaPredicted RBP11.33□□□□□ -0.6
CACNA1C-225ENST00000480911 MINK1Q8N4C8 1332 aaPredicted RBP11.33□□□□□ -0.6
CACNA1C-225ENST00000480911 NFKBIBQ15653 356 aa11.33□□□□□ -0.6
CACNA1C-225ENST00000480911 CCDC43Q96MW1 224 aaKnown RBP11.33□□□□□ -0.6
CACNA1C-225ENST00000480911 PCMTD1Q96MG8 357 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-225ENST00000480911 ZMYM4Q5VZL5 1548 aa11.32□□□□□ -0.6
CACNA1C-225ENST00000480911 CCDC141Q6ZP82 1450 aa11.32□□□□□ -0.6
CACNA1C-225ENST00000480911 ZFYVE27Q5T4F4 411 aa11.32□□□□□ -0.6
CACNA1C-225ENST00000480911 CCDC70Q6NSX1 233 aa11.32□□□□□ -0.6
CACNA1C-225ENST00000480911 CRBNQ96SW2 442 aa11.32□□□□□ -0.6
CACNA1C-225ENST00000480911 CT47A1Q5JQC4 288 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-225ENST00000480911 UGGT2Q9NYU1 1516 aa11.32□□□□□ -0.6
CACNA1C-225ENST00000480911 EVC2Q86UK5 1308 aa11.32□□□□□ -0.6
CACNA1C-225ENST00000480911 PLB1Q6P1J6 1458 aa11.32□□□□□ -0.6
CACNA1C-225ENST00000480911 PHF14O94880 888 aa11.31□□□□□ -0.6
CACNA1C-225ENST00000480911 CLUAP1Q96AJ1 413 aa11.31□□□□□ -0.6
CACNA1C-225ENST00000480911 RBM33Q96EV2 1170 aaKnown RBP11.31□□□□□ -0.6
CACNA1C-225ENST00000480911 NBPF8Q3BBV2 869 aa11.31□□□□□ -0.6
CACNA1C-225ENST00000480911 NBPF14Q5TI25 921 aa11.31□□□□□ -0.6
CACNA1C-225ENST00000480911 AFAP1Q8N556 730 aa11.31□□□□□ -0.6
CACNA1C-225ENST00000480911 CSPP1Q1MSJ5 1256 aa11.31□□□□□ -0.6
CACNA1C-225ENST00000480911 TOM1L2Q6ZVM7 507 aa11.31□□□□□ -0.6
CACNA1C-225ENST00000480911 NOL10Q9BSC4 688 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-225ENST00000480911 RALGAPBQ86X10 1494 aa11.3□□□□□ -0.6
CACNA1C-225ENST00000480911 HMMRO75330 724 aa11.3□□□□□ -0.6
CACNA1C-225ENST00000480911 ZMYM3Q14202 1370 aa11.3□□□□□ -0.6
CACNA1C-225ENST00000480911 C9orf84Q5VXU9 1444 aa11.3□□□□□ -0.6
CACNA1C-225ENST00000480911 ABCC5O15440 1437 aa11.29□□□□□ -0.6
CACNA1C-225ENST00000480911 IQGAP2Q13576 1575 aa11.29□□□□□ -0.6
CACNA1C-225ENST00000480911 CHMP4CQ96CF2 233 aa11.29□□□□□ -0.6
CACNA1C-225ENST00000480911 RUNDC1Q96C34 613 aa11.28□□□□□ -0.6
CACNA1C-225ENST00000480911 PRDM11Q9NQV5 511 aa11.28□□□□□ -0.6
CACNA1C-225ENST00000480911 PLCD4Q9BRC7 762 aa11.28□□□□□ -0.6
CACNA1C-225ENST00000480911 NUCB2P80303 420 aa11.28□□□□□ -0.6
CACNA1C-225ENST00000480911 TEFQ10587 303 aa11.28□□□□□ -0.6
CACNA1C-225ENST00000480911 SF3A1Q15459 793 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-225ENST00000480911 WWC2Q6AWC2 1192 aa11.28□□□□□ -0.6
CACNA1C-225ENST00000480911 WDR63Q8IWG1 891 aa11.28□□□□□ -0.6
CACNA1C-225ENST00000480911 MSH6P52701 1360 aa11.28□□□□□ -0.6
CACNA1C-225ENST00000480911 SEPT11Q9NVA2 429 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-225ENST00000480911 TMEM132AQ24JP5 1023 aa11.27□□□□□ -0.6
CACNA1C-225ENST00000480911 UHRF1BP1Q6BDS2 1440 aa11.27□□□□□ -0.6
CACNA1C-225ENST00000480911 CCAR1Q8IX12 1150 aaKnown RBP11.27□□□□□ -0.6
CACNA1C-225ENST00000480911 ABTB2Q8N961 1025 aa11.27□□□□□ -0.6
CACNA1C-225ENST00000480911 STK31Q9BXU1 1019 aa11.27□□□□□ -0.6
CACNA1C-225ENST00000480911 LRPPRCP42704 1394 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-225ENST00000480911 SHANK2Q9UPX8 1470 aa11.27□□□□□ -0.61
CACNA1C-225ENST00000480911 ST18O60284 1047 aa11.26□□□□□ -0.61
CACNA1C-225ENST00000480911 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.26□□□□□ -0.61
CACNA1C-225ENST00000480911 NUTM2GQ5VZR2 741 aa11.26□□□□□ -0.61
CACNA1C-225ENST00000480911 DHX16O60231 1041 aaKnown RBP11.26□□□□□ -0.61
CACNA1C-225ENST00000480911 WDHD1O75717 1129 aaPredicted RBP11.26□□□□□ -0.61
CACNA1C-225ENST00000480911 AKAP17AQ02040 695 aaKnown RBP11.25□□□□□ -0.61
CACNA1C-225ENST00000480911 NPC1L1Q9UHC9 1359 aa11.25□□□□□ -0.61
CACNA1C-225ENST00000480911 PDIA4P13667 645 aaKnown RBP11.25□□□□□ -0.61
CACNA1C-225ENST00000480911 GZF1Q9H116 711 aaPredicted RBP11.25□□□□□ -0.61
CACNA1C-225ENST00000480911 ATP6V1DQ9Y5K8 247 aa11.25□□□□□ -0.61
CACNA1C-225ENST00000480911 TPM1P09493 284 aa11.25□□□□□ -0.61
CACNA1C-225ENST00000480911 SLC26A8Q96RN1 970 aa11.25□□□□□ -0.61
CACNA1C-225ENST00000480911 API5Q9BZZ5 524 aaKnown RBP11.25□□□□□ -0.61
CACNA1C-225ENST00000480911 HSP90AB2PQ58FF8 381 aa11.25□□□□□ -0.61
CACNA1C-225ENST00000480911 BCL11BQ9C0K0 894 aaPredicted RBP11.25□□□□□ -0.61
CACNA1C-225ENST00000480911 HSP90AA2PQ14568 343 aaPredicted RBP11.24□□□□□ -0.61
CACNA1C-225ENST00000480911 DENND4BO75064 1496 aaPredicted RBP11.24□□□□□ -0.61
CACNA1C-225ENST00000480911 ERBINQ96RT1 1412 aa11.24□□□□□ -0.61
CACNA1C-225ENST00000480911 CEBPAP49715 358 aaPredicted RBP11.24□□□□□ -0.61
CACNA1C-225ENST00000480911 GPATCH3Q96I76 525 aa11.24□□□□□ -0.61
CACNA1C-225ENST00000480911 U2AF1L5P0DN76 240 aaPredicted RBP11.24□□□□□ -0.61
CACNA1C-225ENST00000480911 U2AF1Q01081 240 aaKnown RBP eCLIP11.24□□□□□ -0.61
CACNA1C-225ENST00000480911 DZIP1LQ8IYY4 767 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms