RNA–Protein interactions for RNA: ENST00000480650.3

PDZD4-206, Transcript of PDZ domain containing 4, humanhuman

TSL 5

Gene PDZD4, Length 876 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-206ENST00000480650 ATF3P18847 181 aa16.87■□□□□ 0.29
PDZD4-206ENST00000480650 C19orf44Q9H6X5 657 aa16.87■□□□□ 0.29
PDZD4-206ENST00000480650 MINK1Q8N4C8 1332 aaPredicted RBP16.87■□□□□ 0.29
PDZD4-206ENST00000480650 HIRIP3Q9BW71 556 aaPredicted RBP16.86■□□□□ 0.29
PDZD4-206ENST00000480650 NCOA3Q9Y6Q9 1424 aa16.86■□□□□ 0.29
PDZD4-206ENST00000480650 ARHGEF28Q8N1W1 1705 aaKnown RBP16.85■□□□□ 0.29
PDZD4-206ENST00000480650 EIF4G2P78344 907 aaKnown RBP eCLIP16.85■□□□□ 0.29
PDZD4-206ENST00000480650 ST20-MTHFSA0A0A6YYL1 179 aa16.84■□□□□ 0.29
PDZD4-206ENST00000480650 USP47Q96K76 1375 aa16.84■□□□□ 0.29
PDZD4-206ENST00000480650 XIRP1Q702N8 1843 aaKnown RBP16.83■□□□□ 0.28
PDZD4-206ENST00000480650 UBAP1LF5GYI3 381 aa16.82■□□□□ 0.28
PDZD4-206ENST00000480650 CADPS2Q86UW7 1296 aa16.82■□□□□ 0.28
PDZD4-206ENST00000480650 ADGRL3Q9HAR2 1447 aa16.81■□□□□ 0.28
PDZD4-206ENST00000480650 TOM1O60784 492 aa16.81■□□□□ 0.28
PDZD4-206ENST00000480650 IQSEC2Q5JU85 1478 aa16.8■□□□□ 0.28
PDZD4-206ENST00000480650 SCAF1Q9H7N4 1312 aaKnown RBP16.8■□□□□ 0.28
PDZD4-206ENST00000480650 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.8■□□□□ 0.28
PDZD4-206ENST00000480650 NUTM2FA1L443 756 aa16.8■□□□□ 0.28
PDZD4-206ENST00000480650 HSPA5P11021 654 aaKnown RBP16.8■□□□□ 0.28
PDZD4-206ENST00000480650 QRICH2Q9H0J4 1663 aa16.79■□□□□ 0.28
PDZD4-206ENST00000480650 SLC24A1O60721 1099 aa16.79■□□□□ 0.28
PDZD4-206ENST00000480650 NALCNQ8IZF0 1738 aa16.79■□□□□ 0.28
PDZD4-206ENST00000480650 WASLO00401 505 aaPredicted RBP16.78■□□□□ 0.28
PDZD4-206ENST00000480650 SRPK2P78362 688 aaKnown RBP16.78■□□□□ 0.28
PDZD4-206ENST00000480650 CDK19Q9BWU1 502 aa16.78■□□□□ 0.28
PDZD4-206ENST00000480650 EVC2Q86UK5 1308 aa16.77■□□□□ 0.28
PDZD4-206ENST00000480650 PIP4K2BP78356 416 aa16.77■□□□□ 0.28
PDZD4-206ENST00000480650 SLAIN2Q9P270 581 aa16.77■□□□□ 0.28
PDZD4-206ENST00000480650 SOCS7O14512 581 aa16.76■□□□□ 0.27
PDZD4-206ENST00000480650 TMF1P82094 1093 aa16.75■□□□□ 0.27
PDZD4-206ENST00000480650 DCCP43146 1447 aa16.75■□□□□ 0.27
PDZD4-206ENST00000480650 CABP2Q9NPB3 220 aa16.74■□□□□ 0.27
PDZD4-206ENST00000480650 CDC42BPGQ6DT37 1551 aa16.72■□□□□ 0.27
PDZD4-206ENST00000480650 ESCO1Q5FWF5 840 aa16.72■□□□□ 0.27
PDZD4-206ENST00000480650 TESK2Q96S53 571 aa16.72■□□□□ 0.27
PDZD4-206ENST00000480650 POLR3GLQ9BT43 218 aa16.72■□□□□ 0.27
PDZD4-206ENST00000480650 CDCA8Q53HL2 280 aa16.71■□□□□ 0.27
PDZD4-206ENST00000480650 NUDT16Q96DE0 195 aaKnown RBP16.71■□□□□ 0.27
PDZD4-206ENST00000480650 SBNO2Q9Y2G9 1366 aa16.71■□□□□ 0.27
PDZD4-206ENST00000480650 ADGRB2O60241 1585 aa16.71■□□□□ 0.27
PDZD4-206ENST00000480650 MED1Q15648 1581 aaPredicted RBP16.69■□□□□ 0.26
PDZD4-206ENST00000480650 C1orf167Q5SNV9 1468 aa16.69■□□□□ 0.26
PDZD4-206ENST00000480650 ORAI2Q96SN7 254 aa16.69■□□□□ 0.26
PDZD4-206ENST00000480650 FMN2Q9NZ56 1722 aa16.69■□□□□ 0.26
PDZD4-206ENST00000480650 MST1RQ04912 1400 aa16.69■□□□□ 0.26
PDZD4-206ENST00000480650 TMC1Q8TDI8 760 aa16.68■□□□□ 0.26
PDZD4-206ENST00000480650 TULP4Q9NRJ4 1543 aa16.67■□□□□ 0.26
PDZD4-206ENST00000480650 PMFBP1Q8TBY8 1022 aa16.67■□□□□ 0.26
PDZD4-206ENST00000480650 CCDC61Q9Y6R9 512 aa16.67■□□□□ 0.26
PDZD4-206ENST00000480650 BRINP3Q76B58 766 aa16.66■□□□□ 0.26
PDZD4-206ENST00000480650 ANKARQ7Z5J8 1434 aa16.66■□□□□ 0.26
PDZD4-206ENST00000480650 PHF8Q9UPP1 1060 aa16.66■□□□□ 0.26
PDZD4-206ENST00000480650 RGPD8O14715 1765 aaPredicted RBP16.66■□□□□ 0.26
PDZD4-206ENST00000480650 PRR36Q9H6K5 1346 aa16.66■□□□□ 0.26
PDZD4-206ENST00000480650 HSPA1LP34931 641 aa16.65■□□□□ 0.26
PDZD4-206ENST00000480650 NGDNQ8NEJ9 315 aaKnown RBP16.65■□□□□ 0.26
PDZD4-206ENST00000480650 ATAD2Q6PL18 1390 aa16.64■□□□□ 0.26
PDZD4-206ENST00000480650 PUS7Q96PZ0 661 aaKnown RBP16.64■□□□□ 0.25
PDZD4-206ENST00000480650 CABP1Q9NZU7 370 aa16.64■□□□□ 0.25
PDZD4-206ENST00000480650 FOXO3O43524 673 aa16.63■□□□□ 0.25
PDZD4-206ENST00000480650 PSME1Q06323 249 aa16.63■□□□□ 0.25
PDZD4-206ENST00000480650 ROBO1Q9Y6N7 1651 aa16.62■□□□□ 0.25
PDZD4-206ENST00000480650 PPIP5K1Q6PFW1 1433 aa16.62■□□□□ 0.25
PDZD4-206ENST00000480650 ATP7BP35670 1465 aa16.61■□□□□ 0.25
PDZD4-206ENST00000480650 USP32Q8NFA0 1604 aa16.61■□□□□ 0.25
PDZD4-206ENST00000480650 DDX17Q92841 729 aaKnown RBP16.61■□□□□ 0.25
PDZD4-206ENST00000480650 ITSN1Q15811 1721 aa16.61■□□□□ 0.25
PDZD4-206ENST00000480650 C11orf95C9JLR9 678 aaPredicted RBP16.6■□□□□ 0.25
PDZD4-206ENST00000480650 SLC12A5Q9H2X9 1139 aa16.6■□□□□ 0.25
PDZD4-206ENST00000480650 PLEKHG3A1L390 1219 aa16.59■□□□□ 0.25
PDZD4-206ENST00000480650 XPCQ01831 940 aaPredicted RBP16.59■□□□□ 0.25
PDZD4-206ENST00000480650 KRT28Q7Z3Y7 464 aa16.59■□□□□ 0.25
PDZD4-206ENST00000480650 HDGFL2Q7Z4V5 671 aaPredicted RBP16.59■□□□□ 0.25
PDZD4-206ENST00000480650 ACEP12821 1306 aa16.59■□□□□ 0.25
PDZD4-206ENST00000480650 NPHP3Q7Z494 1330 aa16.59■□□□□ 0.25
PDZD4-206ENST00000480650 TERF2IPQ9NYB0 399 aa16.58■□□□□ 0.24
PDZD4-206ENST00000480650 KIF1AQ12756 1690 aa16.58■□□□□ 0.24
PDZD4-206ENST00000480650 PAK3O75914 559 aaPredicted RBP16.57■□□□□ 0.24
PDZD4-206ENST00000480650 KIF7Q2M1P5 1343 aa16.56■□□□□ 0.24
PDZD4-206ENST00000480650 LMOD2Q6P5Q4 547 aa16.56■□□□□ 0.24
PDZD4-206ENST00000480650 ZNF692Q9BU19 519 aaPredicted RBP16.56■□□□□ 0.24
PDZD4-206ENST00000480650 NINLQ9Y2I6 1382 aa16.55■□□□□ 0.24
PDZD4-206ENST00000480650 TOPAZ1Q8N9V7 1692 aa16.55■□□□□ 0.24
PDZD4-206ENST00000480650 PHLPP1O60346 1717 aa16.54■□□□□ 0.24
PDZD4-206ENST00000480650 KTN1Q86UP2 1357 aaKnown RBP16.53■□□□□ 0.24
PDZD4-206ENST00000480650 CCDC7Q96M83 1385 aa16.53■□□□□ 0.24
PDZD4-206ENST00000480650 WASHC2AQ641Q2 1341 aa16.53■□□□□ 0.24
PDZD4-206ENST00000480650 LRRC59Q96AG4 307 aaKnown RBP16.53■□□□□ 0.24
PDZD4-206ENST00000480650 POLR3AO14802 1390 aaPredicted RBP16.52■□□□□ 0.24
PDZD4-206ENST00000480650 ZNF316A6NFI3 1004 aaPredicted RBP16.52■□□□□ 0.24
PDZD4-206ENST00000480650 SOS2Q07890 1332 aaPredicted RBP16.5■□□□□ 0.23
PDZD4-206ENST00000480650 NHSL1Q5SYE7 1610 aa16.5■□□□□ 0.23
PDZD4-206ENST00000480650 AHDC1Q5TGY3 1603 aaPredicted RBP16.5■□□□□ 0.23
PDZD4-206ENST00000480650 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
PDZD4-206ENST00000480650 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.5■□□□□ 0.23
PDZD4-206ENST00000480650 PANK3Q9H999 370 aa16.49■□□□□ 0.23
PDZD4-206ENST00000480650 ANKRD36BQ8N2N9 1353 aa16.49■□□□□ 0.23
PDZD4-206ENST00000480650 A0A1W2PP64 1363 aa16.48■□□□□ 0.23
PDZD4-206ENST00000480650 PXDNQ92626 1479 aa16.48■□□□□ 0.23
PDZD4-206ENST00000480650 USP6P35125 1406 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms