RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 KANK4Q5T7N3 995 aaPredicted RBP11.48□□□□□ -0.57
VEGFA-212ENST00000480614 CECR2Q9BXF3 1484 aa11.48□□□□□ -0.57
VEGFA-212ENST00000480614 RAD21O60216 631 aa11.48□□□□□ -0.57
VEGFA-212ENST00000480614 TXLNAP40222 546 aa11.48□□□□□ -0.57
VEGFA-212ENST00000480614 CCDC39Q9UFE4 941 aa11.48□□□□□ -0.57
VEGFA-212ENST00000480614 PSMA5P28066 241 aa11.48□□□□□ -0.57
VEGFA-212ENST00000480614 GNAI1P63096 354 aa11.48□□□□□ -0.57
VEGFA-212ENST00000480614 MROH2BQ7Z745 1585 aa11.47□□□□□ -0.57
VEGFA-212ENST00000480614 CAGE1Q8TC20 777 aa11.47□□□□□ -0.57
VEGFA-212ENST00000480614 MBD3O95983 291 aa11.47□□□□□ -0.57
VEGFA-212ENST00000480614 PSME1Q06323 249 aa11.47□□□□□ -0.57
VEGFA-212ENST00000480614 ST20-MTHFSA0A0A6YYL1 179 aa11.47□□□□□ -0.57
VEGFA-212ENST00000480614 WWC2Q6AWC2 1192 aa11.47□□□□□ -0.57
VEGFA-212ENST00000480614 LUC7LQ9NQ29 371 aaKnown RBP11.47□□□□□ -0.57
VEGFA-212ENST00000480614 RRBP1Q9P2E9 1410 aaKnown RBP11.46□□□□□ -0.57
VEGFA-212ENST00000480614 ERLIN2O94905 339 aa11.46□□□□□ -0.57
VEGFA-212ENST00000480614 IFT57Q9NWB7 429 aa11.46□□□□□ -0.57
VEGFA-212ENST00000480614 HSP90AB2PQ58FF8 381 aa11.46□□□□□ -0.57
VEGFA-212ENST00000480614 SMARCE1Q969G3 411 aa11.46□□□□□ -0.57
VEGFA-212ENST00000480614 DIAPH1O60610 1272 aaKnown RBP11.46□□□□□ -0.57
VEGFA-212ENST00000480614 MEX3CQ5U5Q3 659 aaKnown RBP11.46□□□□□ -0.57
VEGFA-212ENST00000480614 VPS37CA5D8V6 355 aaPredicted RBP11.46□□□□□ -0.57
VEGFA-212ENST00000480614 MCM2P49736 904 aa11.46□□□□□ -0.57
VEGFA-212ENST00000480614 MYOM3Q5VTT5 1437 aa11.46□□□□□ -0.57
VEGFA-212ENST00000480614 HNRNPMP52272 730 aaKnown RBP eCLIP11.46□□□□□ -0.581e-12■■■■■ 34.3
VEGFA-212ENST00000480614 FAM43AQ8N2R8 423 aa11.45□□□□□ -0.58
VEGFA-212ENST00000480614 MSH5O43196 834 aa11.45□□□□□ -0.58
VEGFA-212ENST00000480614 RUNDC1Q96C34 613 aa11.45□□□□□ -0.58
VEGFA-212ENST00000480614 CNTROBQ8N137 903 aa11.45□□□□□ -0.58
VEGFA-212ENST00000480614 FYCO1Q9BQS8 1478 aa11.44□□□□□ -0.58
VEGFA-212ENST00000480614 FKBP5Q13451 457 aaPredicted RBP11.44□□□□□ -0.58
VEGFA-212ENST00000480614 FBXW7Q969H0 707 aa11.44□□□□□ -0.58
VEGFA-212ENST00000480614 TDRD9Q8NDG6 1382 aaKnown RBP11.44□□□□□ -0.58
VEGFA-212ENST00000480614 HMGN5P82970 282 aaKnown RBP11.44□□□□□ -0.58
VEGFA-212ENST00000480614 AEBP2Q6ZN18 517 aaPredicted RBP11.44□□□□□ -0.58
VEGFA-212ENST00000480614 TBC1D2BQ9UPU7 963 aa11.44□□□□□ -0.58
VEGFA-212ENST00000480614 KINO60870 393 aaKnown RBP11.44□□□□□ -0.58
VEGFA-212ENST00000480614 CDC45O75419 566 aa11.44□□□□□ -0.58
VEGFA-212ENST00000480614 FOXD4L6Q3SYB3 417 aaPredicted RBP11.44□□□□□ -0.58
VEGFA-212ENST00000480614 FOXD4L3Q6VB84 417 aaPredicted RBP11.44□□□□□ -0.58
VEGFA-212ENST00000480614 MAGEC2Q9UBF1 373 aaPredicted RBP11.44□□□□□ -0.58
VEGFA-212ENST00000480614 ANKRD18AQ8IVF6 992 aa11.43□□□□□ -0.58
VEGFA-212ENST00000480614 EIF2S2P20042 333 aaKnown RBP11.43□□□□□ -0.58
VEGFA-212ENST00000480614 NASPP49321 788 aaPredicted RBP11.43□□□□□ -0.58
VEGFA-212ENST00000480614 PKNOX2Q96KN3 472 aa11.43□□□□□ -0.58
VEGFA-212ENST00000480614 CRBNQ96SW2 442 aa11.43□□□□□ -0.58
VEGFA-212ENST00000480614 JMYQ8N9B5 988 aa11.43□□□□□ -0.58
VEGFA-212ENST00000480614 KIF21BO75037 1637 aa11.43□□□□□ -0.58
VEGFA-212ENST00000480614 RIPK4P57078 832 aa11.43□□□□□ -0.58
VEGFA-212ENST00000480614 ZNF396Q96N95 335 aaPredicted RBP11.43□□□□□ -0.58
VEGFA-212ENST00000480614 ERC1Q8IUD2 1116 aa11.43□□□□□ -0.58
VEGFA-212ENST00000480614 DHX57Q6P158 1386 aaKnown RBP11.43□□□□□ -0.58
VEGFA-212ENST00000480614 GNL3LQ9NVN8 582 aaKnown RBP11.42□□□□□ -0.58
VEGFA-212ENST00000480614 SMG6Q86US8 1419 aaKnown RBP11.42□□□□□ -0.58
VEGFA-212ENST00000480614 STIM1Q13586 685 aa11.42□□□□□ -0.58
VEGFA-212ENST00000480614 SUPT6HQ7KZ85 1726 aaKnown RBP11.42□□□□□ -0.58
VEGFA-212ENST00000480614 SDF4Q9BRK5 362 aa11.42□□□□□ -0.58
VEGFA-212ENST00000480614 TSPYL4Q9UJ04 414 aa11.42□□□□□ -0.58
VEGFA-212ENST00000480614 FILIP1LQ4L180 1135 aa11.42□□□□□ -0.58
VEGFA-212ENST00000480614 C22orf23Q9BZE7 217 aa11.42□□□□□ -0.58
VEGFA-212ENST00000480614 CNTLNQ9NXG0 1405 aa11.42□□□□□ -0.58
VEGFA-212ENST00000480614 CCDC66A2RUB6 948 aa11.41□□□□□ -0.58
VEGFA-212ENST00000480614 PTPRGP23470 1445 aa11.41□□□□□ -0.58
VEGFA-212ENST00000480614 GOLGA6L10A6NI86 522 aa11.41□□□□□ -0.58
VEGFA-212ENST00000480614 HMGB2P26583 209 aaKnown RBP11.41□□□□□ -0.58
VEGFA-212ENST00000480614 NUTM2DQ5VT03 806 aaPredicted RBP11.41□□□□□ -0.58
VEGFA-212ENST00000480614 ZNHIT6Q9NWK9 470 aaKnown RBP11.41□□□□□ -0.58
VEGFA-212ENST00000480614 COG6Q9Y2V7 657 aa11.41□□□□□ -0.58
VEGFA-212ENST00000480614 UBTFL1P0CB47 393 aaPredicted RBP11.41□□□□□ -0.58
VEGFA-212ENST00000480614 CDK5RAP3Q96JB5 506 aa11.41□□□□□ -0.58
VEGFA-212ENST00000480614 BCL2L13Q9BXK5 485 aa11.41□□□□□ -0.58
VEGFA-212ENST00000480614 RAPGEF4Q8WZA2 1011 aa11.41□□□□□ -0.58
VEGFA-212ENST00000480614 MINK1Q8N4C8 1332 aaPredicted RBP11.41□□□□□ -0.58
VEGFA-212ENST00000480614 DCAF8L1A6NGE4 600 aa11.4□□□□□ -0.58
VEGFA-212ENST00000480614 H0YHG0 523 aa11.4□□□□□ -0.58
VEGFA-212ENST00000480614 RIC3Q7Z5B4 369 aa11.4□□□□□ -0.58
VEGFA-212ENST00000480614 ZFYVE27Q5T4F4 411 aa11.4□□□□□ -0.58
VEGFA-212ENST00000480614 IQCEQ6IPM2 695 aa11.4□□□□□ -0.58
VEGFA-212ENST00000480614 CADPSQ9ULU8 1353 aa11.4□□□□□ -0.58
VEGFA-212ENST00000480614 SYCP1Q15431 976 aa11.4□□□□□ -0.58
VEGFA-212ENST00000480614 ATF3P18847 181 aa11.4□□□□□ -0.59
VEGFA-212ENST00000480614 FAM13BQ9NYF5 915 aa11.39□□□□□ -0.59
VEGFA-212ENST00000480614 SYTL4Q96C24 671 aaPredicted RBP11.39□□□□□ -0.59
VEGFA-212ENST00000480614 JPH4Q96JJ6 628 aa11.39□□□□□ -0.59
VEGFA-212ENST00000480614 NUTM2FA1L443 756 aa11.39□□□□□ -0.59
VEGFA-212ENST00000480614 EZRP15311 586 aaKnown RBP11.39□□□□□ -0.59
VEGFA-212ENST00000480614 MRE11P49959 708 aa11.39□□□□□ -0.59
VEGFA-212ENST00000480614 RABEP1Q15276 862 aa11.39□□□□□ -0.59
VEGFA-212ENST00000480614 WASHC4Q2M389 1173 aa11.39□□□□□ -0.59
VEGFA-212ENST00000480614 PRKRIP1Q9H875 184 aaPredicted RBP11.39□□□□□ -0.59
VEGFA-212ENST00000480614 GOLGA6L7A0A1B0GV03 622 aa11.39□□□□□ -0.59
VEGFA-212ENST00000480614 TMEM132AQ24JP5 1023 aa11.38□□□□□ -0.59
VEGFA-212ENST00000480614 TAF3Q5VWG9 929 aa11.38□□□□□ -0.59
VEGFA-212ENST00000480614 CFAP65Q6ZU64 1925 aaKnown RBP11.38□□□□□ -0.59
VEGFA-212ENST00000480614 KIF6Q6ZMV9 814 aa11.38□□□□□ -0.59
VEGFA-212ENST00000480614 PDIA4P13667 645 aaKnown RBP11.38□□□□□ -0.59
VEGFA-212ENST00000480614 DESP17661 470 aa11.38□□□□□ -0.59
VEGFA-212ENST00000480614 PDILTQ8N807 584 aa11.38□□□□□ -0.59
VEGFA-212ENST00000480614 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
VEGFA-212ENST00000480614 CCDC7Q96M83 1385 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms