RNA–Protein interactions for RNA: ENST00000480420.5

CTPS1-209, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 750 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-209ENST00000480420 XPCQ01831 940 aaPredicted RBP11.85□□□□□ -0.51
CTPS1-209ENST00000480420 C8orf37Q96NL8 207 aa11.85□□□□□ -0.51
CTPS1-209ENST00000480420 SRCAPQ6ZRS2 3230 aa11.85□□□□□ -0.51
CTPS1-209ENST00000480420 SPATA31E1Q6ZUB1 1445 aa11.85□□□□□ -0.51
CTPS1-209ENST00000480420 ACIN1Q9UKV3 1341 aaKnown RBP11.85□□□□□ -0.51
CTPS1-209ENST00000480420 C1orf167Q5SNV9 1468 aa11.84□□□□□ -0.51
CTPS1-209ENST00000480420 MSH5O43196 834 aa11.84□□□□□ -0.51
CTPS1-209ENST00000480420 CFAP70Q5T0N1 1121 aa11.84□□□□□ -0.51
CTPS1-209ENST00000480420 PTCH1Q13635 1447 aa11.84□□□□□ -0.51
CTPS1-209ENST00000480420 ZNF772Q68DY9 489 aaPredicted RBP11.83□□□□□ -0.52
CTPS1-209ENST00000480420 NGLY1Q96IV0 654 aa11.82□□□□□ -0.52
CTPS1-209ENST00000480420 POGKQ9P215 609 aa11.82□□□□□ -0.52
CTPS1-209ENST00000480420 AFF2P51816 1311 aa11.82□□□□□ -0.52
CTPS1-209ENST00000480420 CDK12Q9NYV4 1490 aaPredicted RBP11.82□□□□□ -0.52
CTPS1-209ENST00000480420 PLEKHH1Q9ULM0 1364 aa11.81□□□□□ -0.52
CTPS1-209ENST00000480420 FOXO3O43524 673 aa11.81□□□□□ -0.52
CTPS1-209ENST00000480420 DCAF11Q8TEB1 546 aa11.81□□□□□ -0.52
CTPS1-209ENST00000480420 LRPPRCP42704 1394 aaKnown RBP11.8□□□□□ -0.52
CTPS1-209ENST00000480420 RGPD8O14715 1765 aaPredicted RBP11.8□□□□□ -0.52
CTPS1-209ENST00000480420 YTHDC2Q9H6S0 1430 aaKnown RBP11.8□□□□□ -0.52
CTPS1-209ENST00000480420 LMOD2Q6P5Q4 547 aa11.8□□□□□ -0.52
CTPS1-209ENST00000480420 DHX57Q6P158 1386 aaKnown RBP11.79□□□□□ -0.52
CTPS1-209ENST00000480420 PIK3C2GO75747 1445 aa11.79□□□□□ -0.52
CTPS1-209ENST00000480420 RXRBP28702 533 aa11.79□□□□□ -0.52
CTPS1-209ENST00000480420 C14orf93Q9H972 538 aaKnown RBP11.79□□□□□ -0.52
CTPS1-209ENST00000480420 PNPLA6Q8IY17 1366 aa11.79□□□□□ -0.52
CTPS1-209ENST00000480420 HAP1P54257 671 aaPredicted RBP11.78□□□□□ -0.52
CTPS1-209ENST00000480420 PRAM1Q96QH2 718 aa11.78□□□□□ -0.52
CTPS1-209ENST00000480420 TRAK1Q9UPV9 953 aa11.78□□□□□ -0.52
CTPS1-209ENST00000480420 NPHP3Q7Z494 1330 aa11.78□□□□□ -0.52
CTPS1-209ENST00000480420 KNDC1Q76NI1 1749 aa11.77□□□□□ -0.52
CTPS1-209ENST00000480420 CDC42BPGQ6DT37 1551 aa11.77□□□□□ -0.53
CTPS1-209ENST00000480420 HIRIP3Q9BW71 556 aaPredicted RBP11.77□□□□□ -0.53
CTPS1-209ENST00000480420 QTRT2Q9H974 415 aaKnown RBP11.77□□□□□ -0.53
CTPS1-209ENST00000480420 ABCC11Q96J66 1382 aa11.77□□□□□ -0.53
CTPS1-209ENST00000480420 RGS12O14924 1447 aa11.77□□□□□ -0.53
CTPS1-209ENST00000480420 LAMC1P11047 1609 aa11.76□□□□□ -0.53
CTPS1-209ENST00000480420 FMN2Q9NZ56 1722 aa11.75□□□□□ -0.53
CTPS1-209ENST00000480420 SOS2Q07890 1332 aaPredicted RBP11.75□□□□□ -0.53
CTPS1-209ENST00000480420 MINK1Q8N4C8 1332 aaPredicted RBP11.75□□□□□ -0.53
CTPS1-209ENST00000480420 KRT28Q7Z3Y7 464 aa11.74□□□□□ -0.53
CTPS1-209ENST00000480420 USP21Q9UK80 565 aa11.74□□□□□ -0.53
CTPS1-209ENST00000480420 TECPR2O15040 1411 aa11.74□□□□□ -0.53
CTPS1-209ENST00000480420 MYOM2P54296 1465 aa11.74□□□□□ -0.53
CTPS1-209ENST00000480420 PSME1Q06323 249 aa11.73□□□□□ -0.53
CTPS1-209ENST00000480420 PMFBP1Q8TBY8 1022 aa11.73□□□□□ -0.53
CTPS1-209ENST00000480420 PHF8Q9UPP1 1060 aa11.73□□□□□ -0.53
CTPS1-209ENST00000480420 PRAG1Q86YV5 1406 aa11.72□□□□□ -0.53
CTPS1-209ENST00000480420 RBM6P78332 1123 aaKnown RBP11.71□□□□□ -0.53
CTPS1-209ENST00000480420 KIF1AQ12756 1690 aa11.71□□□□□ -0.54
CTPS1-209ENST00000480420 NRXN1Q9ULB1 1477 aa11.7□□□□□ -0.54
CTPS1-209ENST00000480420 CABLES1Q8TDN4 633 aa11.7□□□□□ -0.54
CTPS1-209ENST00000480420 PXDNQ92626 1479 aa11.7□□□□□ -0.54
CTPS1-209ENST00000480420 MARF1Q9Y4F3 1742 aaKnown RBP11.69□□□□□ -0.54
CTPS1-209ENST00000480420 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
CTPS1-209ENST00000480420 HRCP23327 699 aa11.69□□□□□ -0.54
CTPS1-209ENST00000480420 NEUROD1Q13562 356 aa11.69□□□□□ -0.54
CTPS1-209ENST00000480420 SIRT1Q96EB6 747 aa11.69□□□□□ -0.54
CTPS1-209ENST00000480420 TRPC5Q9UL62 973 aaPredicted RBP11.69□□□□□ -0.54
CTPS1-209ENST00000480420 CCDC9Q9Y3X0 531 aaKnown RBP11.69□□□□□ -0.54
CTPS1-209ENST00000480420 NGDNQ8NEJ9 315 aaKnown RBP11.68□□□□□ -0.54
CTPS1-209ENST00000480420 EP400Q96L91 3159 aa11.68□□□□□ -0.54
CTPS1-209ENST00000480420 COL22A1Q8NFW1 1626 aaPredicted RBP11.68□□□□□ -0.54
CTPS1-209ENST00000480420 SPATA31A3Q5VYP0 1347 aa11.67□□□□□ -0.54
CTPS1-209ENST00000480420 A0A0G2JS52 829 aa11.66□□□□□ -0.54
CTPS1-209ENST00000480420 MYT1Q01538 1121 aa11.66□□□□□ -0.54
CTPS1-209ENST00000480420 ADGRB1O14514 1584 aa11.66□□□□□ -0.54
CTPS1-209ENST00000480420 GPRASP1Q5JY77 1395 aa11.66□□□□□ -0.54
CTPS1-209ENST00000480420 ATAD2Q6PL18 1390 aa11.66□□□□□ -0.54
CTPS1-209ENST00000480420 DLC1Q96QB1 1528 aa11.65□□□□□ -0.54
CTPS1-209ENST00000480420 WASLO00401 505 aaPredicted RBP11.65□□□□□ -0.54
CTPS1-209ENST00000480420 ARHGEF28Q8N1W1 1705 aaKnown RBP11.65□□□□□ -0.54
CTPS1-209ENST00000480420 USP32Q8NFA0 1604 aa11.64□□□□□ -0.55
CTPS1-209ENST00000480420 TNS3Q68CZ2 1445 aa11.64□□□□□ -0.55
CTPS1-209ENST00000480420 STAC3Q96MF2 364 aa11.64□□□□□ -0.55
CTPS1-209ENST00000480420 SIN3AQ96ST3 1273 aa11.64□□□□□ -0.55
CTPS1-209ENST00000480420 NBPF1Q3BBV0 1214 aa11.63□□□□□ -0.55
CTPS1-209ENST00000480420 NUTM2GQ5VZR2 741 aa11.63□□□□□ -0.55
CTPS1-209ENST00000480420 FNBP4Q8N3X1 1017 aaPredicted RBP11.63□□□□□ -0.55
CTPS1-209ENST00000480420 EIF3AQ14152 1382 aaKnown RBP11.63□□□□□ -0.55
CTPS1-209ENST00000480420 PRR36Q9H6K5 1346 aa11.62□□□□□ -0.55
CTPS1-209ENST00000480420 SRPK2P78362 688 aaKnown RBP11.62□□□□□ -0.55
CTPS1-209ENST00000480420 NUDT16Q96DE0 195 aaKnown RBP11.62□□□□□ -0.55
CTPS1-209ENST00000480420 CDK19Q9BWU1 502 aa11.62□□□□□ -0.55
CTPS1-209ENST00000480420 ADGRB2O60241 1585 aa11.62□□□□□ -0.55
CTPS1-209ENST00000480420 ANKARQ7Z5J8 1434 aa11.61□□□□□ -0.55
CTPS1-209ENST00000480420 ITSN1Q15811 1721 aa11.61□□□□□ -0.55
CTPS1-209ENST00000480420 UNC5CLQ8IV45 518 aa11.61□□□□□ -0.55
CTPS1-209ENST00000480420 GJD4Q96KN9 370 aaPredicted RBP11.61□□□□□ -0.55
CTPS1-209ENST00000480420 ZRANB1Q9UGI0 708 aa11.61□□□□□ -0.55
CTPS1-209ENST00000480420 ARHGEF10O15013 1369 aa11.61□□□□□ -0.55
CTPS1-209ENST00000480420 ATRNO75882 1429 aa11.6□□□□□ -0.55
CTPS1-209ENST00000480420 TULP4Q9NRJ4 1543 aa11.6□□□□□ -0.55
CTPS1-209ENST00000480420 BCL9LQ86UU0 1499 aa11.6□□□□□ -0.55
CTPS1-209ENST00000480420 SBNO1A3KN83 1393 aa11.6□□□□□ -0.55
CTPS1-209ENST00000480420 L3MBTL2Q969R5 705 aa11.6□□□□□ -0.55
CTPS1-209ENST00000480420 PLCH1Q4KWH8 1693 aa11.59□□□□□ -0.55
CTPS1-209ENST00000480420 ZBTB7CA1YPR0 619 aa11.59□□□□□ -0.55
CTPS1-209ENST00000480420 ABCA3Q99758 1704 aa11.59□□□□□ -0.55
CTPS1-209ENST00000480420 KIAA1210Q9ULL0 1709 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms