RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 FMN2Q9NZ56 1722 aa17.36■□□□□ 0.37
CCM2-212ENST00000480382 TRAK1Q9UPV9 953 aa17.36■□□□□ 0.37
CCM2-212ENST00000480382 NBPF1Q3BBV0 1214 aa17.35■□□□□ 0.37
CCM2-212ENST00000480382 PRAM1Q96QH2 718 aa17.35■□□□□ 0.37
CCM2-212ENST00000480382 ADGRB2O60241 1585 aa17.35■□□□□ 0.37
CCM2-212ENST00000480382 PHLPP1O60346 1717 aa17.35■□□□□ 0.37
CCM2-212ENST00000480382 HSPA1LP34931 641 aa17.34■□□□□ 0.37
CCM2-212ENST00000480382 SIRT1Q96EB6 747 aa17.34■□□□□ 0.37
CCM2-212ENST00000480382 CLSPNQ9HAW4 1339 aa17.34■□□□□ 0.37
CCM2-212ENST00000480382 SAFB2Q14151 953 aaKnown RBP eCLIP17.33■□□□□ 0.36
CCM2-212ENST00000480382 NHSL1Q5SYE7 1610 aa17.32■□□□□ 0.36
CCM2-212ENST00000480382 C1orf167Q5SNV9 1468 aa17.32■□□□□ 0.36
CCM2-212ENST00000480382 NBPF8Q3BBV2 869 aa17.32■□□□□ 0.36
CCM2-212ENST00000480382 CCER1Q8TC90 406 aaPredicted RBP17.32■□□□□ 0.36
CCM2-212ENST00000480382 POGKQ9P215 609 aa17.31■□□□□ 0.36
CCM2-212ENST00000480382 QRICH2Q9H0J4 1663 aa17.31■□□□□ 0.36
CCM2-212ENST00000480382 AHDC1Q5TGY3 1603 aaPredicted RBP17.31■□□□□ 0.36
CCM2-212ENST00000480382 RALGAPBQ86X10 1494 aa17.31■□□□□ 0.36
CCM2-212ENST00000480382 RGPD8O14715 1765 aaPredicted RBP17.3■□□□□ 0.36
CCM2-212ENST00000480382 ROCK2O75116 1388 aaKnown RBP17.3■□□□□ 0.36
CCM2-212ENST00000480382 COL16A1Q07092 1604 aaPredicted RBP17.3■□□□□ 0.36
CCM2-212ENST00000480382 BRINP3Q76B58 766 aa17.29■□□□□ 0.36
CCM2-212ENST00000480382 USP32Q8NFA0 1604 aa17.28■□□□□ 0.36
CCM2-212ENST00000480382 MINK1Q8N4C8 1332 aaPredicted RBP17.26■□□□□ 0.35
CCM2-212ENST00000480382 NUTM2FA1L443 756 aa17.26■□□□□ 0.35
CCM2-212ENST00000480382 HIRIP3Q9BW71 556 aaPredicted RBP17.26■□□□□ 0.35
CCM2-212ENST00000480382 GPRASP1Q5JY77 1395 aa17.26■□□□□ 0.35
CCM2-212ENST00000480382 KIF1AQ12756 1690 aa17.26■□□□□ 0.35
CCM2-212ENST00000480382 ORAI2Q96SN7 254 aa17.24■□□□□ 0.35
CCM2-212ENST00000480382 TULP4Q9NRJ4 1543 aa17.24■□□□□ 0.35
CCM2-212ENST00000480382 CENPJQ9HC77 1338 aaPredicted RBP17.22■□□□□ 0.35
CCM2-212ENST00000480382 ITSN1Q15811 1721 aa17.22■□□□□ 0.35
CCM2-212ENST00000480382 SHPRHQ149N8 1683 aa17.21■□□□□ 0.35
CCM2-212ENST00000480382 EIF3AQ14152 1382 aaKnown RBP17.21■□□□□ 0.35
CCM2-212ENST00000480382 ESCO1Q5FWF5 840 aa17.21■□□□□ 0.35
CCM2-212ENST00000480382 DDX17Q92841 729 aaKnown RBP17.21■□□□□ 0.35
CCM2-212ENST00000480382 ANKARQ7Z5J8 1434 aa17.21■□□□□ 0.34
CCM2-212ENST00000480382 TOPAZ1Q8N9V7 1692 aa17.2■□□□□ 0.34
CCM2-212ENST00000480382 CARD11Q9BXL7 1154 aa17.2■□□□□ 0.34
CCM2-212ENST00000480382 TIMELESSQ9UNS1 1208 aa17.2■□□□□ 0.34
CCM2-212ENST00000480382 MED1Q15648 1581 aaPredicted RBP17.19■□□□□ 0.34
CCM2-212ENST00000480382 WASLO00401 505 aaPredicted RBP17.19■□□□□ 0.34
CCM2-212ENST00000480382 ATP7BP35670 1465 aa17.18■□□□□ 0.34
CCM2-212ENST00000480382 PXDNQ92626 1479 aa17.17■□□□□ 0.34
CCM2-212ENST00000480382 PRR36Q9H6K5 1346 aa17.17■□□□□ 0.34
CCM2-212ENST00000480382 JCADQ9P266 1359 aa17.15■□□□□ 0.34
CCM2-212ENST00000480382 CDK19Q9BWU1 502 aa17.14■□□□□ 0.33
CCM2-212ENST00000480382 NPHP3Q7Z494 1330 aa17.14■□□□□ 0.33
CCM2-212ENST00000480382 FOXO3O43524 673 aa17.13■□□□□ 0.33
CCM2-212ENST00000480382 PHF8Q9UPP1 1060 aa17.13■□□□□ 0.33
CCM2-212ENST00000480382 SOS2Q07890 1332 aaPredicted RBP17.13■□□□□ 0.33
CCM2-212ENST00000480382 XPCQ01831 940 aaPredicted RBP17.12■□□□□ 0.33
CCM2-212ENST00000480382 TRPM3Q9HCF6 1732 aaPredicted RBP17.11■□□□□ 0.33
CCM2-212ENST00000480382 PMFBP1Q8TBY8 1022 aa17.11■□□□□ 0.33
CCM2-212ENST00000480382 SBNO2Q9Y2G9 1366 aa17.11■□□□□ 0.33
CCM2-212ENST00000480382 COL22A1Q8NFW1 1626 aaPredicted RBP17.1■□□□□ 0.33
CCM2-212ENST00000480382 SRPK2P78362 688 aaKnown RBP17.1■□□□□ 0.33
CCM2-212ENST00000480382 NUDT16Q96DE0 195 aaKnown RBP17.1■□□□□ 0.33
CCM2-212ENST00000480382 PNPLA6Q8IY17 1366 aa17.1■□□□□ 0.33
CCM2-212ENST00000480382 LRP6O75581 1613 aa17.1■□□□□ 0.33
CCM2-212ENST00000480382 LRRC59Q96AG4 307 aaKnown RBP17.09■□□□□ 0.33
CCM2-212ENST00000480382 CABP2Q9NPB3 220 aa17.09■□□□□ 0.33
CCM2-212ENST00000480382 USP47Q96K76 1375 aa17.09■□□□□ 0.33
CCM2-212ENST00000480382 EVC2Q86UK5 1308 aa17.08■□□□□ 0.32
CCM2-212ENST00000480382 PPIP5K1Q6PFW1 1433 aa17.07■□□□□ 0.32
CCM2-212ENST00000480382 ALS2Q96Q42 1657 aa17.07■□□□□ 0.32
CCM2-212ENST00000480382 SPATA31A6Q5VVP1 1343 aa17.06■□□□□ 0.32
CCM2-212ENST00000480382 KRT28Q7Z3Y7 464 aa17.06■□□□□ 0.32
CCM2-212ENST00000480382 TNS3Q68CZ2 1445 aa17.05■□□□□ 0.32
CCM2-212ENST00000480382 DISP3Q9P2K9 1392 aa17.05■□□□□ 0.32
CCM2-212ENST00000480382 ABCA3Q99758 1704 aa17.05■□□□□ 0.32
CCM2-212ENST00000480382 ST20-MTHFSA0A0A6YYL1 179 aa17.05■□□□□ 0.32
CCM2-212ENST00000480382 CCDC61Q9Y6R9 512 aa17.04■□□□□ 0.32
CCM2-212ENST00000480382 AKAP12Q02952 1782 aa17.04■□□□□ 0.32
CCM2-212ENST00000480382 POLR3AO14802 1390 aaPredicted RBP17.03■□□□□ 0.32
CCM2-212ENST00000480382 PSME1Q06323 249 aa17.03■□□□□ 0.32
CCM2-212ENST00000480382 NGDNQ8NEJ9 315 aaKnown RBP17.03■□□□□ 0.32
CCM2-212ENST00000480382 SBNO1A3KN83 1393 aa17.02■□□□□ 0.32
CCM2-212ENST00000480382 SPATA31A3Q5VYP0 1347 aa17.02■□□□□ 0.32
CCM2-212ENST00000480382 MARF1Q9Y4F3 1742 aaKnown RBP17.02■□□□□ 0.32
CCM2-212ENST00000480382 NUTM2BA6NNL0 878 aaPredicted RBP17.02■□□□□ 0.32
CCM2-212ENST00000480382 NUTM2EB1AL46 878 aaPredicted RBP17.02■□□□□ 0.32
CCM2-212ENST00000480382 NUTM2AQ8IVF1 878 aaPredicted RBP17.02■□□□□ 0.32
CCM2-212ENST00000480382 TESK2Q96S53 571 aa17.02■□□□□ 0.32
CCM2-212ENST00000480382 ACEP12821 1306 aa17.01■□□□□ 0.31
CCM2-212ENST00000480382 CRYBG1Q9Y4K1 1723 aa17.01■□□□□ 0.31
CCM2-212ENST00000480382 ATAD2Q6PL18 1390 aa17.01■□□□□ 0.31
CCM2-212ENST00000480382 PLEKHG3A1L390 1219 aa17■□□□□ 0.31
CCM2-212ENST00000480382 MON2Q7Z3U7 1717 aa16.99■□□□□ 0.31
CCM2-212ENST00000480382 NRKQ7Z2Y5 1582 aa16.99■□□□□ 0.31
CCM2-212ENST00000480382 PHF23Q9BUL5 403 aaPredicted RBP16.99■□□□□ 0.31
CCM2-212ENST00000480382 CABP1Q9NZU7 370 aa16.99■□□□□ 0.31
CCM2-212ENST00000480382 MEX3CQ5U5Q3 659 aaKnown RBP16.98■□□□□ 0.31
CCM2-212ENST00000480382 ARHGEF10O15013 1369 aa16.98■□□□□ 0.31
CCM2-212ENST00000480382 PHRF1Q9P1Y6 1649 aaKnown RBP16.97■□□□□ 0.31
CCM2-212ENST00000480382 LMOD2Q6P5Q4 547 aa16.97■□□□□ 0.31
CCM2-212ENST00000480382 PAK3O75914 559 aaPredicted RBP16.96■□□□□ 0.31
CCM2-212ENST00000480382 USP6P35125 1406 aa16.96■□□□□ 0.3
CCM2-212ENST00000480382 MYOM1P52179 1685 aa16.95■□□□□ 0.3
CCM2-212ENST00000480382 PIK3C2AO00443 1686 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms