RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 C11orf95C9JLR9 678 aaPredicted RBP17.5■□□□□ 0.39
SIK3-209ENST00000480222 PRAM1Q96QH2 718 aa17.5■□□□□ 0.39
SIK3-209ENST00000480222 POGKQ9P215 609 aa17.5■□□□□ 0.39
SIK3-209ENST00000480222 MYOM1P52179 1685 aa17.5■□□□□ 0.39
SIK3-209ENST00000480222 ROBO2Q9HCK4 1378 aa17.5■□□□□ 0.39
SIK3-209ENST00000480222 DIEXFQ68CQ4 756 aaKnown RBP17.47■□□□□ 0.39
SIK3-209ENST00000480222 EVC2Q86UK5 1308 aa17.47■□□□□ 0.39
SIK3-209ENST00000480222 PLEKHH1Q9ULM0 1364 aa17.46■□□□□ 0.39
SIK3-209ENST00000480222 PUS7Q96PZ0 661 aaKnown RBP17.46■□□□□ 0.39
SIK3-209ENST00000480222 AMOTL2Q9Y2J4 779 aa17.46■□□□□ 0.39
SIK3-209ENST00000480222 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.44■□□□□ 0.38
SIK3-209ENST00000480222 LTBP4Q8N2S1 1624 aa17.43■□□□□ 0.38
SIK3-209ENST00000480222 NINLQ9Y2I6 1382 aa17.43■□□□□ 0.38
SIK3-209ENST00000480222 CDC42BPGQ6DT37 1551 aa17.43■□□□□ 0.38
SIK3-209ENST00000480222 ATAD2Q6PL18 1390 aa17.42■□□□□ 0.38
SIK3-209ENST00000480222 NALCNQ8IZF0 1738 aa17.42■□□□□ 0.38
SIK3-209ENST00000480222 KCNA6P17658 529 aa17.42■□□□□ 0.38
SIK3-209ENST00000480222 DDX10Q13206 875 aaKnown RBP17.42■□□□□ 0.38
SIK3-209ENST00000480222 SAFB2Q14151 953 aaKnown RBP eCLIP17.41■□□□□ 0.38
SIK3-209ENST00000480222 WAPLQ7Z5K2 1190 aa17.41■□□□□ 0.38
SIK3-209ENST00000480222 MINK1Q8N4C8 1332 aaPredicted RBP17.41■□□□□ 0.38
SIK3-209ENST00000480222 POLR3GLQ9BT43 218 aa17.4■□□□□ 0.38
SIK3-209ENST00000480222 STRCP1A6NGW2 1772 aa17.4■□□□□ 0.38
SIK3-209ENST00000480222 TOPAZ1Q8N9V7 1692 aa17.39■□□□□ 0.37
SIK3-209ENST00000480222 ADGRL3Q9HAR2 1447 aa17.38■□□□□ 0.37
SIK3-209ENST00000480222 ITSN1Q15811 1721 aa17.38■□□□□ 0.37
SIK3-209ENST00000480222 IQSEC2Q5JU85 1478 aa17.38■□□□□ 0.37
SIK3-209ENST00000480222 FMN2Q9NZ56 1722 aa17.38■□□□□ 0.37
SIK3-209ENST00000480222 NCOA3Q9Y6Q9 1424 aa17.37■□□□□ 0.37
SIK3-209ENST00000480222 ATP7BP35670 1465 aa17.37■□□□□ 0.37
SIK3-209ENST00000480222 WASLO00401 505 aaPredicted RBP17.36■□□□□ 0.37
SIK3-209ENST00000480222 SRPK2P78362 688 aaKnown RBP17.35■□□□□ 0.37
SIK3-209ENST00000480222 ANKARQ7Z5J8 1434 aa17.35■□□□□ 0.37
SIK3-209ENST00000480222 USP32Q8NFA0 1604 aa17.35■□□□□ 0.37
SIK3-209ENST00000480222 ILDR2Q71H61 639 aa17.34■□□□□ 0.37
SIK3-209ENST00000480222 CDK19Q9BWU1 502 aa17.34■□□□□ 0.37
SIK3-209ENST00000480222 DCCP43146 1447 aa17.32■□□□□ 0.36
SIK3-209ENST00000480222 ANKRD36BQ8N2N9 1353 aa17.32■□□□□ 0.36
SIK3-209ENST00000480222 CABP2Q9NPB3 220 aa17.32■□□□□ 0.36
SIK3-209ENST00000480222 PPIP5K1Q6PFW1 1433 aa17.29■□□□□ 0.36
SIK3-209ENST00000480222 XIRP1Q702N8 1843 aaKnown RBP17.28■□□□□ 0.36
SIK3-209ENST00000480222 AKAP12Q02952 1782 aa17.28■□□□□ 0.36
SIK3-209ENST00000480222 ZNF335Q9H4Z2 1342 aaPredicted RBP17.28■□□□□ 0.36
SIK3-209ENST00000480222 LRRC7Q96NW7 1537 aa17.28■□□□□ 0.36
SIK3-209ENST00000480222 MON2Q7Z3U7 1717 aa17.28■□□□□ 0.36
SIK3-209ENST00000480222 PROSER2Q86WR7 435 aaPredicted RBP17.28■□□□□ 0.36
SIK3-209ENST00000480222 PANK3Q9H999 370 aa17.28■□□□□ 0.36
SIK3-209ENST00000480222 TMEM94Q12767 1356 aa17.28■□□□□ 0.36
SIK3-209ENST00000480222 KTN1Q86UP2 1357 aaKnown RBP17.28■□□□□ 0.36
SIK3-209ENST00000480222 CD163L1Q9NR16 1453 aa17.27■□□□□ 0.36
SIK3-209ENST00000480222 TMC1Q8TDI8 760 aa17.27■□□□□ 0.36
SIK3-209ENST00000480222 NPC1L1Q9UHC9 1359 aa17.27■□□□□ 0.35
SIK3-209ENST00000480222 SOCS7O14512 581 aa17.26■□□□□ 0.35
SIK3-209ENST00000480222 ANP32CO43423 234 aa17.26■□□□□ 0.35
SIK3-209ENST00000480222 NUDT16Q96DE0 195 aaKnown RBP17.26■□□□□ 0.35
SIK3-209ENST00000480222 CCDC61Q9Y6R9 512 aa17.26■□□□□ 0.35
SIK3-209ENST00000480222 A0A1W2PP64 1363 aa17.26■□□□□ 0.35
SIK3-209ENST00000480222 PRR36Q9H6K5 1346 aa17.25■□□□□ 0.35
SIK3-209ENST00000480222 TERF2IPQ9NYB0 399 aa17.25■□□□□ 0.35
SIK3-209ENST00000480222 NRKQ7Z2Y5 1582 aa17.24■□□□□ 0.35
SIK3-209ENST00000480222 NSD3Q9BZ95 1437 aa17.24■□□□□ 0.35
SIK3-209ENST00000480222 KIF1AQ12756 1690 aa17.24■□□□□ 0.35
SIK3-209ENST00000480222 PER1O15534 1290 aaPredicted RBP17.24■□□□□ 0.35
SIK3-209ENST00000480222 C14orf37Q86TY3 774 aa17.24■□□□□ 0.35
SIK3-209ENST00000480222 SLC12A5Q9H2X9 1139 aa17.24■□□□□ 0.35
SIK3-209ENST00000480222 CPSF1Q10570 1443 aaKnown RBP17.23■□□□□ 0.35
SIK3-209ENST00000480222 RGPD8O14715 1765 aaPredicted RBP17.23■□□□□ 0.35
SIK3-209ENST00000480222 C19orf44Q9H6X5 657 aa17.23■□□□□ 0.35
SIK3-209ENST00000480222 KNSTRNQ9Y448 316 aa17.23■□□□□ 0.35
SIK3-209ENST00000480222 MSH6P52701 1360 aa17.23■□□□□ 0.35
SIK3-209ENST00000480222 ANKRD26Q9UPS8 1709 aa17.22■□□□□ 0.35
SIK3-209ENST00000480222 KIF20BQ96Q89 1820 aa17.22■□□□□ 0.35
SIK3-209ENST00000480222 HDGFL2Q7Z4V5 671 aaPredicted RBP17.22■□□□□ 0.35
SIK3-209ENST00000480222 NSD2O96028 1365 aa17.22■□□□□ 0.35
SIK3-209ENST00000480222 CABP1Q9NZU7 370 aa17.21■□□□□ 0.35
SIK3-209ENST00000480222 EDC4Q6P2E9 1401 aaKnown RBP17.21■□□□□ 0.34
SIK3-209ENST00000480222 POLR3AO14802 1390 aaPredicted RBP17.2■□□□□ 0.34
SIK3-209ENST00000480222 PARD3Q8TEW0 1356 aa17.2■□□□□ 0.34
SIK3-209ENST00000480222 UBAP1LF5GYI3 381 aa17.2■□□□□ 0.34
SIK3-209ENST00000480222 PLEKHG3A1L390 1219 aa17.19■□□□□ 0.34
SIK3-209ENST00000480222 PRKRIP1Q9H875 184 aaPredicted RBP17.19■□□□□ 0.34
SIK3-209ENST00000480222 CGNL1Q0VF96 1302 aa17.19■□□□□ 0.34
SIK3-209ENST00000480222 AMER1Q5JTC6 1135 aaPredicted RBP17.18■□□□□ 0.34
SIK3-209ENST00000480222 MIER1Q8N108 512 aa17.18■□□□□ 0.34
SIK3-209ENST00000480222 RBM33Q96EV2 1170 aaKnown RBP17.18■□□□□ 0.34
SIK3-209ENST00000480222 MST1RQ04912 1400 aa17.18■□□□□ 0.34
SIK3-209ENST00000480222 USP6P35125 1406 aa17.17■□□□□ 0.34
SIK3-209ENST00000480222 RALBP1Q15311 655 aa17.17■□□□□ 0.34
SIK3-209ENST00000480222 CADPS2Q86UW7 1296 aa17.17■□□□□ 0.34
SIK3-209ENST00000480222 CARD14Q9BXL6 1004 aa17.17■□□□□ 0.34
SIK3-209ENST00000480222 C1orf167Q5SNV9 1468 aa17.17■□□□□ 0.34
SIK3-209ENST00000480222 ATF3P18847 181 aa17.16■□□□□ 0.34
SIK3-209ENST00000480222 ZNF692Q9BU19 519 aaPredicted RBP17.16■□□□□ 0.34
SIK3-209ENST00000480222 BRD4O60885 1362 aaPredicted RBP17.15■□□□□ 0.34
SIK3-209ENST00000480222 NUTM2FA1L443 756 aa17.14■□□□□ 0.33
SIK3-209ENST00000480222 CCER2I3L3R5 266 aa17.14■□□□□ 0.33
SIK3-209ENST00000480222 ACEP12821 1306 aa17.14■□□□□ 0.33
SIK3-209ENST00000480222 USP54Q70EL1 1684 aa17.13■□□□□ 0.33
SIK3-209ENST00000480222 MYBBP1AQ9BQG0 1328 aaKnown RBP17.12■□□□□ 0.33
SIK3-209ENST00000480222 SSH2Q76I76 1423 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 254 ms