RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 SLIT2O94813 1529 aa19.05■□□□□ 0.64
USP11-208ENST00000480104 CROCC2H7BZ55 1655 aa19.05■□□□□ 0.64
USP11-208ENST00000480104 METP08581 1390 aa19.03■□□□□ 0.64
USP11-208ENST00000480104 NRXN3Q9Y4C0 1643 aa19.03■□□□□ 0.64
USP11-208ENST00000480104 ZNF784Q8NCA9 323 aaPredicted RBP19.01■□□□□ 0.63
USP11-208ENST00000480104 PXDNQ92626 1479 aa18.98■□□□□ 0.63
USP11-208ENST00000480104 DCAF8L1A6NGE4 600 aa18.98■□□□□ 0.63
USP11-208ENST00000480104 ONECUT3O60422 494 aaPredicted RBP18.97■□□□□ 0.63
USP11-208ENST00000480104 VPS72Q15906 364 aa18.96■□□□□ 0.63
USP11-208ENST00000480104 DAPK1P53355 1430 aa18.96■□□□□ 0.63
USP11-208ENST00000480104 NPHP3Q7Z494 1330 aa18.96■□□□□ 0.63
USP11-208ENST00000480104 ANKRD30AQ9BXX3 1397 aa18.95■□□□□ 0.62
USP11-208ENST00000480104 DISP2A7MBM2 1401 aa18.95■□□□□ 0.62
USP11-208ENST00000480104 C1QTNF8P60827 252 aa18.95■□□□□ 0.62
USP11-208ENST00000480104 XPCQ01831 940 aaPredicted RBP18.95■□□□□ 0.62
USP11-208ENST00000480104 CHIC2Q9UKJ5 165 aa18.94■□□□□ 0.62
USP11-208ENST00000480104 CCDC9Q9Y3X0 531 aaKnown RBP18.94■□□□□ 0.62
USP11-208ENST00000480104 PTPN23Q9H3S7 1636 aa18.93■□□□□ 0.62
USP11-208ENST00000480104 A0A0G2JS52 829 aa18.93■□□□□ 0.62
USP11-208ENST00000480104 MYT1Q01538 1121 aa18.93■□□□□ 0.62
USP11-208ENST00000480104 NINLQ9Y2I6 1382 aa18.93■□□□□ 0.62
USP11-208ENST00000480104 RGPD1P0DJD0 1748 aa18.92■□□□□ 0.62
USP11-208ENST00000480104 EZH2Q15910 746 aaKnown RBP18.92■□□□□ 0.62
USP11-208ENST00000480104 PPP1R1BQ9UD71 204 aaPredicted RBP18.92■□□□□ 0.62
USP11-208ENST00000480104 ADGRL2O95490 1459 aa18.91■□□□□ 0.62
USP11-208ENST00000480104 USP32Q8NFA0 1604 aa18.9■□□□□ 0.62
USP11-208ENST00000480104 CAMTA1Q9Y6Y1 1673 aa18.89■□□□□ 0.61
USP11-208ENST00000480104 FAM182BQ5T319 152 aa18.89■□□□□ 0.61
USP11-208ENST00000480104 TNS1Q9HBL0 1735 aaKnown RBP18.88■□□□□ 0.61
USP11-208ENST00000480104 FOXO3O43524 673 aa18.87■□□□□ 0.61
USP11-208ENST00000480104 ESCO1Q5FWF5 840 aa18.87■□□□□ 0.61
USP11-208ENST00000480104 ROBO2Q9HCK4 1378 aa18.87■□□□□ 0.61
USP11-208ENST00000480104 FAM98CQ17RN3 349 aaKnown RBP18.86■□□□□ 0.61
USP11-208ENST00000480104 CAMKK2Q96RR4 588 aa18.86■□□□□ 0.61
USP11-208ENST00000480104 KANK4Q5T7N3 995 aaPredicted RBP18.85■□□□□ 0.61
USP11-208ENST00000480104 SPON1Q9HCB6 807 aa18.84■□□□□ 0.61
USP11-208ENST00000480104 PLCH1Q4KWH8 1693 aa18.84■□□□□ 0.61
USP11-208ENST00000480104 IQGAP3Q86VI3 1631 aa18.84■□□□□ 0.61
USP11-208ENST00000480104 ADGRB2O60241 1585 aa18.83■□□□□ 0.6
USP11-208ENST00000480104 E9PCH4 1651 aa18.82■□□□□ 0.6
USP11-208ENST00000480104 ANKRD50Q9ULJ7 1429 aa18.82■□□□□ 0.6
USP11-208ENST00000480104 SPATA31A3Q5VYP0 1347 aa18.81■□□□□ 0.6
USP11-208ENST00000480104 NWD2Q9ULI1 1742 aa18.81■□□□□ 0.6
USP11-208ENST00000480104 LRPPRCP42704 1394 aaKnown RBP18.8■□□□□ 0.6
USP11-208ENST00000480104 PARD3Q8TEW0 1356 aa18.8■□□□□ 0.6
USP11-208ENST00000480104 KCNQ2O43526 872 aa18.79■□□□□ 0.6
USP11-208ENST00000480104 HAP1P54257 671 aaPredicted RBP18.79■□□□□ 0.6
USP11-208ENST00000480104 ZNF326Q5BKZ1 582 aaKnown RBP18.78■□□□□ 0.6
USP11-208ENST00000480104 CDC42BPGQ6DT37 1551 aa18.77■□□□□ 0.6
USP11-208ENST00000480104 CABLES1Q8TDN4 633 aa18.77■□□□□ 0.6
USP11-208ENST00000480104 PLEKHG5O94827 1062 aa18.76■□□□□ 0.59
USP11-208ENST00000480104 TRIM37O94972 964 aa18.76■□□□□ 0.59
USP11-208ENST00000480104 HFM1A2PYH4 1435 aa18.75■□□□□ 0.59
USP11-208ENST00000480104 PRAG1Q86YV5 1406 aa18.75■□□□□ 0.59
USP11-208ENST00000480104 NUP188Q5SRE5 1749 aa18.74■□□□□ 0.59
USP11-208ENST00000480104 RREB1Q92766 1687 aa18.74■□□□□ 0.59
USP11-208ENST00000480104 APBA3O96018 575 aa18.74■□□□□ 0.59
USP11-208ENST00000480104 NBPF8Q3BBV2 869 aa18.73■□□□□ 0.59
USP11-208ENST00000480104 NBPF14Q5TI25 921 aa18.73■□□□□ 0.59
USP11-208ENST00000480104 CCDC144AA2RUR9 1427 aa18.73■□□□□ 0.59
USP11-208ENST00000480104 NUTM2FA1L443 756 aa18.72■□□□□ 0.59
USP11-208ENST00000480104 FAM83GA6ND36 823 aa18.72■□□□□ 0.59
USP11-208ENST00000480104 NRAPQ86VF7 1730 aa18.71■□□□□ 0.59
USP11-208ENST00000480104 NEXMIFQ5QGS0 1516 aa18.71■□□□□ 0.59
USP11-208ENST00000480104 TNS3Q68CZ2 1445 aa18.71■□□□□ 0.59
USP11-208ENST00000480104 THSD7AQ9UPZ6 1657 aa18.7■□□□□ 0.58
USP11-208ENST00000480104 NRKQ7Z2Y5 1582 aa18.69■□□□□ 0.58
USP11-208ENST00000480104 GIGYF1O75420 1035 aaPredicted RBP18.69■□□□□ 0.58
USP11-208ENST00000480104 KRT28Q7Z3Y7 464 aa18.68■□□□□ 0.58
USP11-208ENST00000480104 ABCA3Q99758 1704 aa18.68■□□□□ 0.58
USP11-208ENST00000480104 NAIPQ13075 1403 aa18.67■□□□□ 0.58
USP11-208ENST00000480104 VPS8Q8N3P4 1428 aa18.67■□□□□ 0.58
USP11-208ENST00000480104 FAM196AQ6ZSG2 479 aa18.67■□□□□ 0.58
USP11-208ENST00000480104 BTG4Q9NY30 223 aa18.67■□□□□ 0.58
USP11-208ENST00000480104 SPATA31A5Q5VU36 1347 aa18.67■□□□□ 0.58
USP11-208ENST00000480104 SPATA31A7Q8IWB4 1347 aa18.67■□□□□ 0.58
USP11-208ENST00000480104 GOLGB1Q14789 3259 aaKnown RBP18.65■□□□□ 0.58
USP11-208ENST00000480104 KIF1AQ12756 1690 aa18.63■□□□□ 0.57
USP11-208ENST00000480104 MYOM1P52179 1685 aa18.62■□□□□ 0.57
USP11-208ENST00000480104 CHD4Q14839 1912 aa18.62■□□□□ 0.57
USP11-208ENST00000480104 LMOD2Q6P5Q4 547 aa18.61■□□□□ 0.57
USP11-208ENST00000480104 ARHGEF10O15013 1369 aa18.6■□□□□ 0.57
USP11-208ENST00000480104 SBNO1A3KN83 1393 aa18.58■□□□□ 0.57
USP11-208ENST00000480104 CASZ1Q86V15 1759 aa18.58■□□□□ 0.56
USP11-208ENST00000480104 NUP155O75694 1391 aa18.57■□□□□ 0.56
USP11-208ENST00000480104 ZBTB7AO95365 584 aa18.57■□□□□ 0.56
USP11-208ENST00000480104 PTGER2P43116 358 aa18.57■□□□□ 0.56
USP11-208ENST00000480104 PSME1Q06323 249 aa18.57■□□□□ 0.56
USP11-208ENST00000480104 FHDC1Q9C0D6 1143 aaPredicted RBP18.57■□□□□ 0.56
USP11-208ENST00000480104 PDGFDQ9GZP0 370 aaPredicted RBP18.57■□□□□ 0.56
USP11-208ENST00000480104 RRBP1Q9P2E9 1410 aaKnown RBP18.57■□□□□ 0.56
USP11-208ENST00000480104 COL14A1Q05707 1796 aaKnown RBP18.56■□□□□ 0.56
USP11-208ENST00000480104 SYT17Q9BSW7 474 aa18.56■□□□□ 0.56
USP11-208ENST00000480104 ANO8Q9HCE9 1232 aaPredicted RBP18.56■□□□□ 0.56
USP11-208ENST00000480104 FMN2Q9NZ56 1722 aa18.54■□□□□ 0.56
USP11-208ENST00000480104 CLTCL1P53675 1640 aa18.54■□□□□ 0.56
USP11-208ENST00000480104 WAPLQ7Z5K2 1190 aa18.54■□□□□ 0.56
USP11-208ENST00000480104 SPATA31A1Q5TZJ5 1347 aa18.53■□□□□ 0.56
USP11-208ENST00000480104 PHF8Q9UPP1 1060 aa18.53■□□□□ 0.56
USP11-208ENST00000480104 VGFO15240 615 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms