RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 LTBP4Q8N2S1 1624 aa15.71■□□□□ 0.11
CLDN11-205ENST00000480067 SLC24A1O60721 1099 aa15.71■□□□□ 0.11
CLDN11-205ENST00000480067 HIRIP3Q9BW71 556 aaPredicted RBP15.71■□□□□ 0.11
CLDN11-205ENST00000480067 KNDC1Q76NI1 1749 aa15.71■□□□□ 0.1
CLDN11-205ENST00000480067 ATF3P18847 181 aa15.69■□□□□ 0.1
CLDN11-205ENST00000480067 MSH6P52701 1360 aa15.69■□□□□ 0.1
CLDN11-205ENST00000480067 CERKQ8TCT0 537 aa15.68■□□□□ 0.1
CLDN11-205ENST00000480067 ARHGEF28Q8N1W1 1705 aaKnown RBP15.68■□□□□ 0.1
CLDN11-205ENST00000480067 TESK2Q96S53 571 aa15.67■□□□□ 0.1
CLDN11-205ENST00000480067 ADGRL3Q9HAR2 1447 aa15.67■□□□□ 0.1
CLDN11-205ENST00000480067 CADPS2Q86UW7 1296 aa15.66■□□□□ 0.1
CLDN11-205ENST00000480067 EVC2Q86UK5 1308 aa15.66■□□□□ 0.1
CLDN11-205ENST00000480067 WASLO00401 505 aaPredicted RBP15.66■□□□□ 0.1
CLDN11-205ENST00000480067 TMF1P82094 1093 aa15.66■□□□□ 0.1
CLDN11-205ENST00000480067 SBNO2Q9Y2G9 1366 aa15.65■□□□□ 0.1
CLDN11-205ENST00000480067 SRPK2P78362 688 aaKnown RBP15.65■□□□□ 0.1
CLDN11-205ENST00000480067 CDK19Q9BWU1 502 aa15.65■□□□□ 0.1
CLDN11-205ENST00000480067 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.63■□□□□ 0.09
CLDN11-205ENST00000480067 NUTM2FA1L443 756 aa15.62■□□□□ 0.09
CLDN11-205ENST00000480067 CDCA8Q53HL2 280 aa15.62■□□□□ 0.09
CLDN11-205ENST00000480067 CABP2Q9NPB3 220 aa15.62■□□□□ 0.09
CLDN11-205ENST00000480067 QRICH2Q9H0J4 1663 aa15.61■□□□□ 0.09
CLDN11-205ENST00000480067 DCCP43146 1447 aa15.61■□□□□ 0.09
CLDN11-205ENST00000480067 TOM1O60784 492 aa15.61■□□□□ 0.09
CLDN11-205ENST00000480067 SLAIN2Q9P270 581 aa15.61■□□□□ 0.09
CLDN11-205ENST00000480067 UBAP1LF5GYI3 381 aa15.59■□□□□ 0.09
CLDN11-205ENST00000480067 NUDT16Q96DE0 195 aaKnown RBP15.59■□□□□ 0.09
CLDN11-205ENST00000480067 IQSEC2Q5JU85 1478 aa15.59■□□□□ 0.09
CLDN11-205ENST00000480067 NALCNQ8IZF0 1738 aa15.59■□□□□ 0.09
CLDN11-205ENST00000480067 PUS7Q96PZ0 661 aaKnown RBP15.58■□□□□ 0.09
CLDN11-205ENST00000480067 POLR3GLQ9BT43 218 aa15.58■□□□□ 0.09
CLDN11-205ENST00000480067 XIRP1Q702N8 1843 aaKnown RBP15.58■□□□□ 0.08
CLDN11-205ENST00000480067 ADGRB2O60241 1585 aa15.58■□□□□ 0.08
CLDN11-205ENST00000480067 CDC42BPGQ6DT37 1551 aa15.58■□□□□ 0.08
CLDN11-205ENST00000480067 DISP3Q9P2K9 1392 aa15.58■□□□□ 0.08
CLDN11-205ENST00000480067 ESCO1Q5FWF5 840 aa15.58■□□□□ 0.08
CLDN11-205ENST00000480067 CCDC61Q9Y6R9 512 aa15.58■□□□□ 0.08
CLDN11-205ENST00000480067 TULP4Q9NRJ4 1543 aa15.56■□□□□ 0.08
CLDN11-205ENST00000480067 C11orf95C9JLR9 678 aaPredicted RBP15.56■□□□□ 0.08
CLDN11-205ENST00000480067 TMC1Q8TDI8 760 aa15.55■□□□□ 0.08
CLDN11-205ENST00000480067 PRR36Q9H6K5 1346 aa15.55■□□□□ 0.08
CLDN11-205ENST00000480067 ATAD2Q6PL18 1390 aa15.55■□□□□ 0.08
CLDN11-205ENST00000480067 MST1RQ04912 1400 aa15.54■□□□□ 0.08
CLDN11-205ENST00000480067 ANKARQ7Z5J8 1434 aa15.54■□□□□ 0.08
CLDN11-205ENST00000480067 PIP4K2BP78356 416 aa15.54■□□□□ 0.08
CLDN11-205ENST00000480067 ORAI2Q96SN7 254 aa15.54■□□□□ 0.08
CLDN11-205ENST00000480067 C1orf167Q5SNV9 1468 aa15.54■□□□□ 0.08
CLDN11-205ENST00000480067 CABP1Q9NZU7 370 aa15.53■□□□□ 0.08
CLDN11-205ENST00000480067 SCAF1Q9H7N4 1312 aaKnown RBP15.53■□□□□ 0.08
CLDN11-205ENST00000480067 PHF8Q9UPP1 1060 aa15.53■□□□□ 0.08
CLDN11-205ENST00000480067 PMFBP1Q8TBY8 1022 aa15.52■□□□□ 0.07
CLDN11-205ENST00000480067 KIF7Q2M1P5 1343 aa15.52■□□□□ 0.07
CLDN11-205ENST00000480067 ZNF316A6NFI3 1004 aaPredicted RBP15.51■□□□□ 0.07
CLDN11-205ENST00000480067 BRINP3Q76B58 766 aa15.51■□□□□ 0.07
CLDN11-205ENST00000480067 NGDNQ8NEJ9 315 aaKnown RBP15.51■□□□□ 0.07
CLDN11-205ENST00000480067 SLC12A5Q9H2X9 1139 aa15.51■□□□□ 0.07
CLDN11-205ENST00000480067 FMN2Q9NZ56 1722 aa15.51■□□□□ 0.07
CLDN11-205ENST00000480067 ATP7BP35670 1465 aa15.51■□□□□ 0.07
CLDN11-205ENST00000480067 PLEKHG3A1L390 1219 aa15.5■□□□□ 0.07
CLDN11-205ENST00000480067 WASHC2AQ641Q2 1341 aa15.5■□□□□ 0.07
CLDN11-205ENST00000480067 PPIP5K1Q6PFW1 1433 aa15.5■□□□□ 0.07
CLDN11-205ENST00000480067 FOXO3O43524 673 aa15.49■□□□□ 0.07
CLDN11-205ENST00000480067 CCDC7Q96M83 1385 aa15.49■□□□□ 0.07
CLDN11-205ENST00000480067 NINLQ9Y2I6 1382 aa15.48■□□□□ 0.07
CLDN11-205ENST00000480067 ACEP12821 1306 aa15.48■□□□□ 0.07
CLDN11-205ENST00000480067 PSME1Q06323 249 aa15.48■□□□□ 0.07
CLDN11-205ENST00000480067 TERF2IPQ9NYB0 399 aa15.48■□□□□ 0.07
CLDN11-205ENST00000480067 ZNF692Q9BU19 519 aaPredicted RBP15.47■□□□□ 0.07
CLDN11-205ENST00000480067 HDGFL2Q7Z4V5 671 aaPredicted RBP15.46■□□□□ 0.07
CLDN11-205ENST00000480067 USP32Q8NFA0 1604 aa15.46■□□□□ 0.07
CLDN11-205ENST00000480067 NPHP3Q7Z494 1330 aa15.45■□□□□ 0.06
CLDN11-205ENST00000480067 DDX17Q92841 729 aaKnown RBP15.45■□□□□ 0.06
CLDN11-205ENST00000480067 KRT28Q7Z3Y7 464 aa15.44■□□□□ 0.06
CLDN11-205ENST00000480067 POLR3AO14802 1390 aaPredicted RBP15.43■□□□□ 0.06
CLDN11-205ENST00000480067 RGPD8O14715 1765 aaPredicted RBP15.43■□□□□ 0.06
CLDN11-205ENST00000480067 XPCQ01831 940 aaPredicted RBP15.43■□□□□ 0.06
CLDN11-205ENST00000480067 PANK3Q9H999 370 aa15.43■□□□□ 0.06
CLDN11-205ENST00000480067 KTN1Q86UP2 1357 aaKnown RBP15.42■□□□□ 0.06
CLDN11-205ENST00000480067 PAK3O75914 559 aaPredicted RBP15.41■□□□□ 0.06
CLDN11-205ENST00000480067 ITSN1Q15811 1721 aa15.41■□□□□ 0.06
CLDN11-205ENST00000480067 FBXO41Q8TF61 875 aa15.41■□□□□ 0.06
CLDN11-205ENST00000480067 ANKRD36BQ8N2N9 1353 aa15.41■□□□□ 0.06
CLDN11-205ENST00000480067 CPSF1Q10570 1443 aaKnown RBP15.41■□□□□ 0.06
CLDN11-205ENST00000480067 ROBO1Q9Y6N7 1651 aa15.41■□□□□ 0.06
CLDN11-205ENST00000480067 A0A1W2PP64 1363 aa15.4■□□□□ 0.06
CLDN11-205ENST00000480067 TOPAZ1Q8N9V7 1692 aa15.4■□□□□ 0.06
CLDN11-205ENST00000480067 DDX10Q13206 875 aaKnown RBP15.4■□□□□ 0.06
CLDN11-205ENST00000480067 KIF1AQ12756 1690 aa15.39■□□□□ 0.05
CLDN11-205ENST00000480067 CD163L1Q9NR16 1453 aa15.39■□□□□ 0.05
CLDN11-205ENST00000480067 SOS2Q07890 1332 aaPredicted RBP15.38■□□□□ 0.05
CLDN11-205ENST00000480067 LRRC59Q96AG4 307 aaKnown RBP15.38■□□□□ 0.05
CLDN11-205ENST00000480067 CARD14Q9BXL6 1004 aa15.38■□□□□ 0.05
CLDN11-205ENST00000480067 USP6P35125 1406 aa15.38■□□□□ 0.05
CLDN11-205ENST00000480067 LMOD2Q6P5Q4 547 aa15.37■□□□□ 0.05
CLDN11-205ENST00000480067 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.37■□□□□ 0.05
CLDN11-205ENST00000480067 BRD4O60885 1362 aaPredicted RBP15.37■□□□□ 0.05
CLDN11-205ENST00000480067 KNSTRNQ9Y448 316 aa15.36■□□□□ 0.05
CLDN11-205ENST00000480067 TTC21BQ7Z4L5 1316 aa15.36■□□□□ 0.05
CLDN11-205ENST00000480067 HSPA1LP34931 641 aa15.36■□□□□ 0.05
CLDN11-205ENST00000480067 ABTB2Q8N961 1025 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms