RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 ADGRL3Q9HAR2 1447 aa15.88■□□□□ 0.13
SMURF1-204ENST00000480055 NUTM2BA6NNL0 878 aaPredicted RBP15.87■□□□□ 0.13
SMURF1-204ENST00000480055 NUTM2EB1AL46 878 aaPredicted RBP15.87■□□□□ 0.13
SMURF1-204ENST00000480055 NUTM2AQ8IVF1 878 aaPredicted RBP15.87■□□□□ 0.13
SMURF1-204ENST00000480055 PNPLA6Q8IY17 1366 aa15.87■□□□□ 0.13
SMURF1-204ENST00000480055 CLTCL1P53675 1640 aa15.86■□□□□ 0.13
SMURF1-204ENST00000480055 MARF1Q9Y4F3 1742 aaKnown RBP15.86■□□□□ 0.13
SMURF1-204ENST00000480055 NEXMIFQ5QGS0 1516 aa15.86■□□□□ 0.13
SMURF1-204ENST00000480055 SPDYE4A6NLX3 237 aa15.85■□□□□ 0.13
SMURF1-204ENST00000480055 RBM42Q9BTD8 480 aaKnown RBP15.85■□□□□ 0.13
SMURF1-204ENST00000480055 COL22A1Q8NFW1 1626 aaPredicted RBP15.84■□□□□ 0.13
SMURF1-204ENST00000480055 ITGAEP38570 1179 aa15.84■□□□□ 0.13
SMURF1-204ENST00000480055 METP08581 1390 aa15.84■□□□□ 0.13
SMURF1-204ENST00000480055 LRRC59Q96AG4 307 aaKnown RBP15.83■□□□□ 0.12
SMURF1-204ENST00000480055 NUP155O75694 1391 aa15.83■□□□□ 0.12
SMURF1-204ENST00000480055 SPDYE2BA6NHP3 402 aa15.82■□□□□ 0.12
SMURF1-204ENST00000480055 SPDYE6P0CI01 402 aa15.82■□□□□ 0.12
SMURF1-204ENST00000480055 SPDYE2Q495Y8 402 aa15.82■□□□□ 0.12
SMURF1-204ENST00000480055 RBM6P78332 1123 aaKnown RBP15.81■□□□□ 0.12
SMURF1-204ENST00000480055 ZNF692Q9BU19 519 aaPredicted RBP15.81■□□□□ 0.12
SMURF1-204ENST00000480055 C8orf37Q96NL8 207 aa15.8■□□□□ 0.12
SMURF1-204ENST00000480055 C1orf167Q5SNV9 1468 aa15.79■□□□□ 0.12
SMURF1-204ENST00000480055 PTCH1Q13635 1447 aa15.79■□□□□ 0.12
SMURF1-204ENST00000480055 PPLO60437 1756 aa15.78■□□□□ 0.12
SMURF1-204ENST00000480055 DDX17Q92841 729 aaKnown RBP15.78■□□□□ 0.12
SMURF1-204ENST00000480055 QTRT2Q9H974 415 aaKnown RBP15.78■□□□□ 0.12
SMURF1-204ENST00000480055 PRAG1Q86YV5 1406 aa15.77■□□□□ 0.12
SMURF1-204ENST00000480055 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.77■□□□□ 0.12
SMURF1-204ENST00000480055 ZNF326Q5BKZ1 582 aaKnown RBP15.77■□□□□ 0.12
SMURF1-204ENST00000480055 ATAD2Q6PL18 1390 aa15.76■□□□□ 0.11
SMURF1-204ENST00000480055 PPARGC1BQ86YN6 1023 aaKnown RBP15.74■□□□□ 0.11
SMURF1-204ENST00000480055 EP400Q96L91 3159 aa15.74■□□□□ 0.11
SMURF1-204ENST00000480055 CDC42BPGQ6DT37 1551 aa15.74■□□□□ 0.11
SMURF1-204ENST00000480055 SOS2Q07890 1332 aaPredicted RBP15.73■□□□□ 0.11
SMURF1-204ENST00000480055 NGLY1Q96IV0 654 aa15.73■□□□□ 0.11
SMURF1-204ENST00000480055 ATRNO75882 1429 aa15.73■□□□□ 0.11
SMURF1-204ENST00000480055 ADAMTS2O95450 1211 aa15.72■□□□□ 0.11
SMURF1-204ENST00000480055 MYOM2P54296 1465 aa15.71■□□□□ 0.11
SMURF1-204ENST00000480055 ROBO2Q9HCK4 1378 aa15.71■□□□□ 0.11
SMURF1-204ENST00000480055 SRCAPQ6ZRS2 3230 aa15.71■□□□□ 0.11
SMURF1-204ENST00000480055 BRWD3Q6RI45 1802 aa15.71■□□□□ 0.1
SMURF1-204ENST00000480055 USP21Q9UK80 565 aa15.69■□□□□ 0.1
SMURF1-204ENST00000480055 TRPC5Q9UL62 973 aaPredicted RBP15.69■□□□□ 0.1
SMURF1-204ENST00000480055 PXDNQ92626 1479 aa15.69■□□□□ 0.1
SMURF1-204ENST00000480055 HFM1A2PYH4 1435 aa15.68■□□□□ 0.1
SMURF1-204ENST00000480055 KNDC1Q76NI1 1749 aa15.68■□□□□ 0.1
SMURF1-204ENST00000480055 FNBP4Q8N3X1 1017 aaPredicted RBP15.68■□□□□ 0.1
SMURF1-204ENST00000480055 ORAI2Q96SN7 254 aa15.68■□□□□ 0.1
SMURF1-204ENST00000480055 IFT172Q9UG01 1749 aa15.68■□□□□ 0.1
SMURF1-204ENST00000480055 BCL9LQ86UU0 1499 aa15.66■□□□□ 0.1
SMURF1-204ENST00000480055 FMN2Q9NZ56 1722 aa15.66■□□□□ 0.1
SMURF1-204ENST00000480055 KIF1AQ12756 1690 aa15.66■□□□□ 0.1
SMURF1-204ENST00000480055 GLI3P10071 1580 aa15.65■□□□□ 0.1
SMURF1-204ENST00000480055 ABCA3Q99758 1704 aa15.64■□□□□ 0.09
SMURF1-204ENST00000480055 SSUH2Q9Y2M2 353 aa15.64■□□□□ 0.09
SMURF1-204ENST00000480055 RGPD8O14715 1765 aaPredicted RBP15.64■□□□□ 0.09
SMURF1-204ENST00000480055 ZRANB1Q9UGI0 708 aa15.63■□□□□ 0.09
SMURF1-204ENST00000480055 USP32Q8NFA0 1604 aa15.63■□□□□ 0.09
SMURF1-204ENST00000480055 PLCH1Q4KWH8 1693 aa15.63■□□□□ 0.09
SMURF1-204ENST00000480055 VGFO15240 615 aaPredicted RBP15.62■□□□□ 0.09
SMURF1-204ENST00000480055 AKT1S1Q96B36 256 aa15.62■□□□□ 0.09
SMURF1-204ENST00000480055 NWD2Q9ULI1 1742 aa15.62■□□□□ 0.09
SMURF1-204ENST00000480055 NPHP3Q7Z494 1330 aa15.62■□□□□ 0.09
SMURF1-204ENST00000480055 LRP5O75197 1615 aa15.61■□□□□ 0.09
SMURF1-204ENST00000480055 NAIPQ13075 1403 aa15.61■□□□□ 0.09
SMURF1-204ENST00000480055 CCDC125Q86Z20 511 aa15.6■□□□□ 0.09
SMURF1-204ENST00000480055 RPGRIP1LQ68CZ1 1315 aa15.6■□□□□ 0.09
SMURF1-204ENST00000480055 SLIT2O94813 1529 aa15.59■□□□□ 0.09
SMURF1-204ENST00000480055 TECPR2O15040 1411 aa15.59■□□□□ 0.09
SMURF1-204ENST00000480055 RALGAPBQ86X10 1494 aa15.58■□□□□ 0.08
SMURF1-204ENST00000480055 BLMP54132 1417 aaPredicted RBP15.57■□□□□ 0.08
SMURF1-204ENST00000480055 RRBP1Q9P2E9 1410 aaKnown RBP15.57■□□□□ 0.08
SMURF1-204ENST00000480055 ESCO1Q5FWF5 840 aa15.56■□□□□ 0.08
SMURF1-204ENST00000480055 GJD4Q96KN9 370 aaPredicted RBP15.56■□□□□ 0.08
SMURF1-204ENST00000480055 LRPPRCP42704 1394 aaKnown RBP15.56■□□□□ 0.08
SMURF1-204ENST00000480055 NRAPQ86VF7 1730 aa15.54■□□□□ 0.08
SMURF1-204ENST00000480055 CCDC144AA2RUR9 1427 aa15.53■□□□□ 0.08
SMURF1-204ENST00000480055 FOXO3O43524 673 aa15.53■□□□□ 0.08
SMURF1-204ENST00000480055 XPCQ01831 940 aaPredicted RBP15.53■□□□□ 0.08
SMURF1-204ENST00000480055 UNC5CLQ8IV45 518 aa15.51■□□□□ 0.07
SMURF1-204ENST00000480055 RGPD1P0DJD0 1748 aa15.51■□□□□ 0.07
SMURF1-204ENST00000480055 SPATA31A3Q5VYP0 1347 aa15.5■□□□□ 0.07
SMURF1-204ENST00000480055 SPATA31E1Q6ZUB1 1445 aa15.5■□□□□ 0.07
SMURF1-204ENST00000480055 ABCC11Q96J66 1382 aa15.49■□□□□ 0.07
SMURF1-204ENST00000480055 PIK3C2GO75747 1445 aa15.49■□□□□ 0.07
SMURF1-204ENST00000480055 TNS3Q68CZ2 1445 aa15.49■□□□□ 0.07
SMURF1-204ENST00000480055 PLEKHH1Q9ULM0 1364 aa15.49■□□□□ 0.07
SMURF1-204ENST00000480055 TRPM3Q9HCF6 1732 aaPredicted RBP15.48■□□□□ 0.07
SMURF1-204ENST00000480055 ADGRF5Q8IZF2 1346 aa15.48■□□□□ 0.07
SMURF1-204ENST00000480055 CRYBG1Q9Y4K1 1723 aa15.48■□□□□ 0.07
SMURF1-204ENST00000480055 WAPLQ7Z5K2 1190 aa15.47■□□□□ 0.07
SMURF1-204ENST00000480055 TNS1Q9HBL0 1735 aaKnown RBP15.47■□□□□ 0.07
SMURF1-204ENST00000480055 ALS2Q96Q42 1657 aa15.47■□□□□ 0.07
SMURF1-204ENST00000480055 ANKRD30BQ9BXX2 1392 aa15.47■□□□□ 0.07
SMURF1-204ENST00000480055 YTHDC2Q9H6S0 1430 aaKnown RBP15.46■□□□□ 0.07
SMURF1-204ENST00000480055 NUTM2FA1L443 756 aa15.46■□□□□ 0.07
SMURF1-204ENST00000480055 PROM2Q8N271 834 aa15.46■□□□□ 0.07
SMURF1-204ENST00000480055 STK26Q9P289 416 aa15.46■□□□□ 0.07
SMURF1-204ENST00000480055 NRXN1Q9ULB1 1477 aa15.46■□□□□ 0.06
SMURF1-204ENST00000480055 COL14A1Q05707 1796 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms