RNA–Protein interactions for RNA: ENST00000480004.1

CAPN9-204, Transcript of calpain 9, humanhuman

TSL 2

Gene CAPN9, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-204ENST00000480004 CCDC141Q6ZP82 1450 aa8.31□□□□□ -1.08
CAPN9-204ENST00000480004 ABCC3O15438 1527 aa8.3□□□□□ -1.08
CAPN9-204ENST00000480004 PRDM15P57071 1507 aaPredicted RBP8.3□□□□□ -1.08
CAPN9-204ENST00000480004 NUTM2BA6NNL0 878 aaPredicted RBP8.3□□□□□ -1.08
CAPN9-204ENST00000480004 NUTM2EB1AL46 878 aaPredicted RBP8.3□□□□□ -1.08
CAPN9-204ENST00000480004 RBM6P78332 1123 aaKnown RBP8.3□□□□□ -1.08
CAPN9-204ENST00000480004 NUTM2DQ5VT03 806 aaPredicted RBP8.3□□□□□ -1.08
CAPN9-204ENST00000480004 NUTM2AQ8IVF1 878 aaPredicted RBP8.3□□□□□ -1.08
CAPN9-204ENST00000480004 TMEM2Q9UHN6 1383 aa8.3□□□□□ -1.08
CAPN9-204ENST00000480004 NKTRP30414 1462 aaKnown RBP8.3□□□□□ -1.08
CAPN9-204ENST00000480004 NCOA2Q15596 1464 aa8.3□□□□□ -1.08
CAPN9-204ENST00000480004 C19orf67A6NJJ6 358 aa8.29□□□□□ -1.08
CAPN9-204ENST00000480004 KCNV2Q8TDN2 545 aa8.29□□□□□ -1.08
CAPN9-204ENST00000480004 NGLY1Q96IV0 654 aa8.29□□□□□ -1.08
CAPN9-204ENST00000480004 MAP3K1Q13233 1512 aa8.29□□□□□ -1.08
CAPN9-204ENST00000480004 CCDC125Q86Z20 511 aa8.28□□□□□ -1.08
CAPN9-204ENST00000480004 RBM33Q96EV2 1170 aaKnown RBP8.28□□□□□ -1.08
CAPN9-204ENST00000480004 SLC26A8Q96RN1 970 aa8.28□□□□□ -1.08
CAPN9-204ENST00000480004 LRP6O75581 1613 aa8.28□□□□□ -1.08
CAPN9-204ENST00000480004 NCOA3Q9Y6Q9 1424 aa8.28□□□□□ -1.08
CAPN9-204ENST00000480004 ATAD2Q6PL18 1390 aa8.27□□□□□ -1.09
CAPN9-204ENST00000480004 HDGFP51858 240 aaKnown RBP8.27□□□□□ -1.09
CAPN9-204ENST00000480004 QTRT2Q9H974 415 aaKnown RBP8.27□□□□□ -1.09
CAPN9-204ENST00000480004 COL16A1Q07092 1604 aaPredicted RBP8.27□□□□□ -1.09
CAPN9-204ENST00000480004 AFF2P51816 1311 aa8.27□□□□□ -1.09
CAPN9-204ENST00000480004 TIAM1Q13009 1591 aa8.27□□□□□ -1.09
CAPN9-204ENST00000480004 ATF3P18847 181 aa8.26□□□□□ -1.09
CAPN9-204ENST00000480004 C14orf37Q86TY3 774 aa8.26□□□□□ -1.09
CAPN9-204ENST00000480004 MS4A3Q96HJ5 214 aa8.26□□□□□ -1.09
CAPN9-204ENST00000480004 TMEM106CQ9BVX2 250 aa8.26□□□□□ -1.09
CAPN9-204ENST00000480004 ARHGAP31Q2M1Z3 1444 aa8.26□□□□□ -1.09
CAPN9-204ENST00000480004 CAMSAP2Q08AD1 1489 aa8.26□□□□□ -1.09
CAPN9-204ENST00000480004 SHPRHQ149N8 1683 aa8.25□□□□□ -1.09
CAPN9-204ENST00000480004 MS4A4AQ96JQ5 239 aa8.25□□□□□ -1.09
CAPN9-204ENST00000480004 C19orf44Q9H6X5 657 aa8.25□□□□□ -1.09
CAPN9-204ENST00000480004 CFAP65Q6ZU64 1925 aaKnown RBP8.25□□□□□ -1.09
CAPN9-204ENST00000480004 CEP162Q5TB80 1403 aa8.24□□□□□ -1.09
CAPN9-204ENST00000480004 GOLGA2Q08379 1002 aa8.24□□□□□ -1.09
CAPN9-204ENST00000480004 LRRC59Q96AG4 307 aaKnown RBP8.24□□□□□ -1.09
CAPN9-204ENST00000480004 AHDC1Q5TGY3 1603 aaPredicted RBP8.24□□□□□ -1.09
CAPN9-204ENST00000480004 EIF2AK4Q9P2K8 1649 aaKnown RBP8.24□□□□□ -1.09
CAPN9-204ENST00000480004 TET3O43151 1660 aa8.24□□□□□ -1.09
CAPN9-204ENST00000480004 KDM5AP29375 1690 aaKnown RBP8.24□□□□□ -1.09
CAPN9-204ENST00000480004 EFCAB6Q5THR3 1501 aa8.24□□□□□ -1.09
CAPN9-204ENST00000480004 NWD1Q149M9 1564 aa8.23□□□□□ -1.09
CAPN9-204ENST00000480004 RGS12O14924 1447 aa8.23□□□□□ -1.09
CAPN9-204ENST00000480004 TIE1P35590 1138 aa8.23□□□□□ -1.09
CAPN9-204ENST00000480004 EHBP1L1Q8N3D4 1523 aa8.23□□□□□ -1.09
CAPN9-204ENST00000480004 ARHGEF5Q12774 1597 aa8.22□□□□□ -1.09
CAPN9-204ENST00000480004 IDI1Q13907 227 aa8.22□□□□□ -1.09
CAPN9-204ENST00000480004 ARHGEF1Q92888 912 aaKnown RBP8.22□□□□□ -1.09
CAPN9-204ENST00000480004 C8orf37Q96NL8 207 aa8.22□□□□□ -1.09
CAPN9-204ENST00000480004 TRPC6Q9Y210 931 aa8.22□□□□□ -1.09
CAPN9-204ENST00000480004 PIK3C2BO00750 1634 aa8.21□□□□□ -1.09
CAPN9-204ENST00000480004 E2F4Q16254 413 aa8.21□□□□□ -1.1
CAPN9-204ENST00000480004 SLC52A1Q9NWF4 448 aa8.21□□□□□ -1.1
CAPN9-204ENST00000480004 TBX22Q9Y458 520 aa8.21□□□□□ -1.1
CAPN9-204ENST00000480004 KANK1Q14678 1352 aa8.21□□□□□ -1.1
CAPN9-204ENST00000480004 PPP1R15AO75807 674 aaPredicted RBP8.2□□□□□ -1.1
CAPN9-204ENST00000480004 MKRN3Q13064 507 aaKnown RBP8.2□□□□□ -1.1
CAPN9-204ENST00000480004 BRINP3Q76B58 766 aa8.2□□□□□ -1.1
CAPN9-204ENST00000480004 TRPC5Q9UL62 973 aaPredicted RBP8.2□□□□□ -1.1
CAPN9-204ENST00000480004 CEP152O94986 1710 aa8.2□□□□□ -1.1
CAPN9-204ENST00000480004 SETD5Q9C0A6 1442 aa8.2□□□□□ -1.1
CAPN9-204ENST00000480004 SETBP1Q9Y6X0 1596 aa8.19□□□□□ -1.1
CAPN9-204ENST00000480004 MFSD10Q14728 455 aa8.19□□□□□ -1.1
CAPN9-204ENST00000480004 CRISPLD2Q9H0B8 497 aa8.19□□□□□ -1.1
CAPN9-204ENST00000480004 PLEKHG1Q9ULL1 1385 aa8.19□□□□□ -1.1
CAPN9-204ENST00000480004 DUOX2Q9NRD8 1548 aa8.19□□□□□ -1.1
CAPN9-204ENST00000480004 MAST1Q9Y2H9 1570 aa8.18□□□□□ -1.1
CAPN9-204ENST00000480004 MROH1Q8NDA8 1641 aa8.18□□□□□ -1.1
CAPN9-204ENST00000480004 CHD2O14647 1828 aaKnown RBP8.18□□□□□ -1.1
CAPN9-204ENST00000480004 TTLL13PA6NNM8 815 aa8.18□□□□□ -1.1
CAPN9-204ENST00000480004 PDE4AP27815 886 aa8.18□□□□□ -1.1
CAPN9-204ENST00000480004 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.18□□□□□ -1.1
CAPN9-204ENST00000480004 PIK3R4Q99570 1358 aa8.18□□□□□ -1.1
CAPN9-204ENST00000480004 CLCN6P51797 869 aa8.17□□□□□ -1.1
CAPN9-204ENST00000480004 USP21Q9UK80 565 aa8.17□□□□□ -1.1
CAPN9-204ENST00000480004 DIP2AQ14689 1571 aa8.17□□□□□ -1.1
CAPN9-204ENST00000480004 SF3B2Q13435 895 aaKnown RBP8.16□□□□□ -1.1
CAPN9-204ENST00000480004 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.16□□□□□ -1.1
CAPN9-204ENST00000480004 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.16□□□□□ -1.1
CAPN9-204ENST00000480004 DCCP43146 1447 aa8.15□□□□□ -1.1
CAPN9-204ENST00000480004 ERBINQ96RT1 1412 aa8.15□□□□□ -1.1
CAPN9-204ENST00000480004 ADAMTS2O95450 1211 aa8.15□□□□□ -1.1
CAPN9-204ENST00000480004 LMOD2Q6P5Q4 547 aa8.15□□□□□ -1.1
CAPN9-204ENST00000480004 LARP6Q9BRS8 491 aaKnown RBP8.15□□□□□ -1.1
CAPN9-204ENST00000480004 BMP2KQ9NSY1 1161 aaPredicted RBP8.15□□□□□ -1.1
CAPN9-204ENST00000480004 ARIH1Q9Y4X5 557 aaPredicted RBP8.15□□□□□ -1.1
CAPN9-204ENST00000480004 ADGRB3O60242 1522 aa8.14□□□□□ -1.11
CAPN9-204ENST00000480004 PNPLA6Q8IY17 1366 aa8.14□□□□□ -1.11
CAPN9-204ENST00000480004 TULP1O00294 542 aaPredicted RBP8.14□□□□□ -1.11
CAPN9-204ENST00000480004 FNBP4Q8N3X1 1017 aaPredicted RBP8.14□□□□□ -1.11
CAPN9-204ENST00000480004 DDX27Q96GQ7 796 aaKnown RBP8.14□□□□□ -1.11
CAPN9-204ENST00000480004 NOS1P29475 1434 aa8.13□□□□□ -1.11
CAPN9-204ENST00000480004 KIF15Q9NS87 1388 aa8.13□□□□□ -1.11
CAPN9-204ENST00000480004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.13□□□□□ -1.11
CAPN9-204ENST00000480004 AMOTL2Q9Y2J4 779 aa8.13□□□□□ -1.11
CAPN9-204ENST00000480004 ASXL1Q8IXJ9 1541 aa8.13□□□□□ -1.11
CAPN9-204ENST00000480004 ZFYVE9O95405 1425 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms