RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 NUTM2AQ8IVF1 878 aaPredicted RBP16.53■□□□□ 0.24
CCDC58-205ENST00000479899 C19orf44Q9H6X5 657 aa16.53■□□□□ 0.24
CCDC58-205ENST00000479899 CREBZFQ9NS37 354 aa16.53■□□□□ 0.24
CCDC58-205ENST00000479899 AMOTL2Q9Y2J4 779 aa16.53■□□□□ 0.24
CCDC58-205ENST00000479899 SPHKAPQ2M3C7 1700 aa16.53■□□□□ 0.24
CCDC58-205ENST00000479899 XRN1Q8IZH2 1706 aaKnown RBP16.53■□□□□ 0.24
CCDC58-205ENST00000479899 NUP155O75694 1391 aa16.52■□□□□ 0.24
CCDC58-205ENST00000479899 PIK3R4Q99570 1358 aa16.52■□□□□ 0.24
CCDC58-205ENST00000479899 NRXN3Q9Y4C0 1643 aa16.52■□□□□ 0.24
CCDC58-205ENST00000479899 ZNF772Q68DY9 489 aaPredicted RBP16.52■□□□□ 0.24
CCDC58-205ENST00000479899 ASXL1Q8IXJ9 1541 aa16.51■□□□□ 0.23
CCDC58-205ENST00000479899 PRKAR2AP13861 404 aaKnown RBP16.51■□□□□ 0.23
CCDC58-205ENST00000479899 PLCD3Q8N3E9 789 aa16.51■□□□□ 0.23
CCDC58-205ENST00000479899 NHSL1Q5SYE7 1610 aa16.5■□□□□ 0.23
CCDC58-205ENST00000479899 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
CCDC58-205ENST00000479899 BRINP3Q76B58 766 aa16.5■□□□□ 0.23
CCDC58-205ENST00000479899 ROCK1Q13464 1354 aa16.5■□□□□ 0.23
CCDC58-205ENST00000479899 ZNF326Q5BKZ1 582 aaKnown RBP16.49■□□□□ 0.23
CCDC58-205ENST00000479899 SETBP1Q9Y6X0 1596 aa16.48■□□□□ 0.23
CCDC58-205ENST00000479899 CHADLQ6NUI6 762 aa16.48■□□□□ 0.23
CCDC58-205ENST00000479899 NALCNQ8IZF0 1738 aa16.48■□□□□ 0.23
CCDC58-205ENST00000479899 DCCP43146 1447 aa16.47■□□□□ 0.23
CCDC58-205ENST00000479899 UPF1Q92900 1129 aaKnown RBP eCLIP16.47■□□□□ 0.23
CCDC58-205ENST00000479899 MST1RQ04912 1400 aa16.46■□□□□ 0.23
CCDC58-205ENST00000479899 RXRBP28702 533 aa16.45■□□□□ 0.22
CCDC58-205ENST00000479899 PPARGC1BQ86YN6 1023 aaKnown RBP16.45■□□□□ 0.22
CCDC58-205ENST00000479899 AFF2P51816 1311 aa16.45■□□□□ 0.22
CCDC58-205ENST00000479899 METP08581 1390 aa16.44■□□□□ 0.22
CCDC58-205ENST00000479899 DDX17Q92841 729 aaKnown RBP16.44■□□□□ 0.22
CCDC58-205ENST00000479899 CLTCL1P53675 1640 aa16.44■□□□□ 0.22
CCDC58-205ENST00000479899 NEXMIFQ5QGS0 1516 aa16.42■□□□□ 0.22
CCDC58-205ENST00000479899 SETD5Q9C0A6 1442 aa16.42■□□□□ 0.22
CCDC58-205ENST00000479899 ADGRL3Q9HAR2 1447 aa16.42■□□□□ 0.22
CCDC58-205ENST00000479899 C8orf37Q96NL8 207 aa16.41■□□□□ 0.22
CCDC58-205ENST00000479899 KIF1BO60333 1816 aa16.4■□□□□ 0.22
CCDC58-205ENST00000479899 CDK12Q9NYV4 1490 aaPredicted RBP16.4■□□□□ 0.22
CCDC58-205ENST00000479899 RGS12O14924 1447 aa16.39■□□□□ 0.21
CCDC58-205ENST00000479899 PNPLA6Q8IY17 1366 aa16.38■□□□□ 0.21
CCDC58-205ENST00000479899 LRRC59Q96AG4 307 aaKnown RBP16.38■□□□□ 0.21
CCDC58-205ENST00000479899 ZBTB47Q9UFB7 747 aaPredicted RBP16.38■□□□□ 0.21
CCDC58-205ENST00000479899 ADAMTS2O95450 1211 aa16.36■□□□□ 0.21
CCDC58-205ENST00000479899 POTEHQ6S545 545 aa16.36■□□□□ 0.21
CCDC58-205ENST00000479899 FARP1Q9Y4F1 1045 aaPredicted RBP16.36■□□□□ 0.21
CCDC58-205ENST00000479899 MNX1P50219 401 aaPredicted RBP16.35■□□□□ 0.21
CCDC58-205ENST00000479899 C1orf167Q5SNV9 1468 aa16.35■□□□□ 0.21
CCDC58-205ENST00000479899 QTRT2Q9H974 415 aaKnown RBP16.34■□□□□ 0.21
CCDC58-205ENST00000479899 IFNLR1Q8IU57 520 aaPredicted RBP16.33■□□□□ 0.2
CCDC58-205ENST00000479899 RBM6P78332 1123 aaKnown RBP16.32■□□□□ 0.2
CCDC58-205ENST00000479899 NGLY1Q96IV0 654 aa16.32■□□□□ 0.2
CCDC58-205ENST00000479899 PTCH1Q13635 1447 aa16.31■□□□□ 0.2
CCDC58-205ENST00000479899 LAMC1P11047 1609 aa16.3■□□□□ 0.2
CCDC58-205ENST00000479899 ROBO2Q9HCK4 1378 aa16.3■□□□□ 0.2
CCDC58-205ENST00000479899 KLHL34Q8N239 644 aa16.3■□□□□ 0.2
CCDC58-205ENST00000479899 ORAI2Q96SN7 254 aa16.3■□□□□ 0.2
CCDC58-205ENST00000479899 PPLO60437 1756 aa16.28■□□□□ 0.2
CCDC58-205ENST00000479899 USP21Q9UK80 565 aa16.27■□□□□ 0.2
CCDC58-205ENST00000479899 NAIPQ13075 1403 aa16.27■□□□□ 0.19
CCDC58-205ENST00000479899 COL22A1Q8NFW1 1626 aaPredicted RBP16.26■□□□□ 0.19
CCDC58-205ENST00000479899 ATAD2Q6PL18 1390 aa16.26■□□□□ 0.19
CCDC58-205ENST00000479899 SOS2Q07890 1332 aaPredicted RBP16.25■□□□□ 0.19
CCDC58-205ENST00000479899 VGFO15240 615 aaPredicted RBP16.25■□□□□ 0.19
CCDC58-205ENST00000479899 EP400Q96L91 3159 aa16.24■□□□□ 0.19
CCDC58-205ENST00000479899 SRCAPQ6ZRS2 3230 aa16.23■□□□□ 0.19
CCDC58-205ENST00000479899 MARF1Q9Y4F3 1742 aaKnown RBP16.23■□□□□ 0.19
CCDC58-205ENST00000479899 CDC42BPGQ6DT37 1551 aa16.23■□□□□ 0.19
CCDC58-205ENST00000479899 HFM1A2PYH4 1435 aa16.23■□□□□ 0.19
CCDC58-205ENST00000479899 TRPC5Q9UL62 973 aaPredicted RBP16.23■□□□□ 0.19
CCDC58-205ENST00000479899 RRBP1Q9P2E9 1410 aaKnown RBP16.22■□□□□ 0.19
CCDC58-205ENST00000479899 XPCQ01831 940 aaPredicted RBP16.22■□□□□ 0.19
CCDC58-205ENST00000479899 ATRNO75882 1429 aa16.21■□□□□ 0.19
CCDC58-205ENST00000479899 ESCO1Q5FWF5 840 aa16.21■□□□□ 0.19
CCDC58-205ENST00000479899 PRAG1Q86YV5 1406 aa16.2■□□□□ 0.18
CCDC58-205ENST00000479899 NUTM2FA1L443 756 aa16.2■□□□□ 0.18
CCDC58-205ENST00000479899 MYOM2P54296 1465 aa16.2■□□□□ 0.18
CCDC58-205ENST00000479899 PXDNQ92626 1479 aa16.2■□□□□ 0.18
CCDC58-205ENST00000479899 NPHP3Q7Z494 1330 aa16.19■□□□□ 0.18
CCDC58-205ENST00000479899 RPGRIP1LQ68CZ1 1315 aa16.19■□□□□ 0.18
CCDC58-205ENST00000479899 STK26Q9P289 416 aa16.18■□□□□ 0.18
CCDC58-205ENST00000479899 FNBP4Q8N3X1 1017 aaPredicted RBP16.17■□□□□ 0.18
CCDC58-205ENST00000479899 SPOCK2Q92563 424 aa16.17■□□□□ 0.18
CCDC58-205ENST00000479899 IFT172Q9UG01 1749 aa16.16■□□□□ 0.18
CCDC58-205ENST00000479899 FOXO3O43524 673 aa16.16■□□□□ 0.18
CCDC58-205ENST00000479899 KNDC1Q76NI1 1749 aa16.16■□□□□ 0.18
CCDC58-205ENST00000479899 ADGRF5Q8IZF2 1346 aa16.15■□□□□ 0.18
CCDC58-205ENST00000479899 FMN2Q9NZ56 1722 aa16.14■□□□□ 0.17
CCDC58-205ENST00000479899 RGL3Q3MIN7 710 aa16.14■□□□□ 0.17
CCDC58-205ENST00000479899 WAPLQ7Z5K2 1190 aa16.14■□□□□ 0.17
CCDC58-205ENST00000479899 BCL9LQ86UU0 1499 aa16.14■□□□□ 0.17
CCDC58-205ENST00000479899 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.14■□□□□ 0.17
CCDC58-205ENST00000479899 CCDC144AA2RUR9 1427 aa16.13■□□□□ 0.17
CCDC58-205ENST00000479899 NUBP1P53384 320 aa16.13■□□□□ 0.17
CCDC58-205ENST00000479899 ZRANB1Q9UGI0 708 aa16.13■□□□□ 0.17
CCDC58-205ENST00000479899 KIF1AQ12756 1690 aa16.13■□□□□ 0.17
CCDC58-205ENST00000479899 PLEKHH1Q9ULM0 1364 aa16.13■□□□□ 0.17
CCDC58-205ENST00000479899 AMER1Q5JTC6 1135 aaPredicted RBP16.12■□□□□ 0.17
CCDC58-205ENST00000479899 GLI3P10071 1580 aa16.12■□□□□ 0.17
CCDC58-205ENST00000479899 LRPPRCP42704 1394 aaKnown RBP16.12■□□□□ 0.17
CCDC58-205ENST00000479899 TMEM132EQ6IEE7 984 aa16.11■□□□□ 0.17
CCDC58-205ENST00000479899 USP32Q8NFA0 1604 aa16.11■□□□□ 0.17
CCDC58-205ENST00000479899 TECPR2O15040 1411 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms