RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 RALGAPBQ86X10 1494 aa17.31■□□□□ 0.36
CCDC18-208ENST00000479653 NPHP3Q7Z494 1330 aa17.31■□□□□ 0.36
CCDC18-208ENST00000479653 FOXO3O43524 673 aa17.31■□□□□ 0.36
CCDC18-208ENST00000479653 YY1P25490 414 aa17.31■□□□□ 0.36
CCDC18-208ENST00000479653 BAG6P46379 1132 aa17.31■□□□□ 0.36
CCDC18-208ENST00000479653 ADGRL2O95490 1459 aa17.31■□□□□ 0.36
CCDC18-208ENST00000479653 CCDC9Q9Y3X0 531 aaKnown RBP17.3■□□□□ 0.36
CCDC18-208ENST00000479653 KRT27Q7Z3Y8 459 aa17.29■□□□□ 0.36
CCDC18-208ENST00000479653 A0A0G2JS52 829 aa17.28■□□□□ 0.36
CCDC18-208ENST00000479653 MYT1Q01538 1121 aa17.28■□□□□ 0.36
CCDC18-208ENST00000479653 NRXN3Q9Y4C0 1643 aa17.28■□□□□ 0.36
CCDC18-208ENST00000479653 NALCNQ8IZF0 1738 aa17.27■□□□□ 0.36
CCDC18-208ENST00000479653 R3HDM1Q15032 1099 aaKnown RBP17.27■□□□□ 0.36
CCDC18-208ENST00000479653 LAMC1P11047 1609 aa17.26■□□□□ 0.35
CCDC18-208ENST00000479653 NUP155O75694 1391 aa17.26■□□□□ 0.35
CCDC18-208ENST00000479653 ROBO2Q9HCK4 1378 aa17.26■□□□□ 0.35
CCDC18-208ENST00000479653 COL22A1Q8NFW1 1626 aaPredicted RBP17.25■□□□□ 0.35
CCDC18-208ENST00000479653 LOC105371045A0A1W2PR82 267 aa17.25■□□□□ 0.35
CCDC18-208ENST00000479653 PLEKHG5O94827 1062 aa17.25■□□□□ 0.35
CCDC18-208ENST00000479653 HAP1P54257 671 aaPredicted RBP17.25■□□□□ 0.35
CCDC18-208ENST00000479653 EN1Q05925 392 aaPredicted RBP17.25■□□□□ 0.35
CCDC18-208ENST00000479653 E9PCH4 1651 aa17.25■□□□□ 0.35
CCDC18-208ENST00000479653 GLI3P10071 1580 aa17.24■□□□□ 0.35
CCDC18-208ENST00000479653 NUTM2FA1L443 756 aa17.23■□□□□ 0.35
CCDC18-208ENST00000479653 VPS72Q15906 364 aa17.23■□□□□ 0.35
CCDC18-208ENST00000479653 SLIT2O94813 1529 aa17.22■□□□□ 0.35
CCDC18-208ENST00000479653 LRPPRCP42704 1394 aaKnown RBP17.22■□□□□ 0.35
CCDC18-208ENST00000479653 ONECUT3O60422 494 aaPredicted RBP17.21■□□□□ 0.35
CCDC18-208ENST00000479653 PXDNQ92626 1479 aa17.2■□□□□ 0.34
CCDC18-208ENST00000479653 VGFO15240 615 aaPredicted RBP17.17■□□□□ 0.34
CCDC18-208ENST00000479653 CABLES1Q8TDN4 633 aa17.17■□□□□ 0.34
CCDC18-208ENST00000479653 SPATA31A3Q5VYP0 1347 aa17.17■□□□□ 0.34
CCDC18-208ENST00000479653 FAM98CQ17RN3 349 aaKnown RBP17.16■□□□□ 0.34
CCDC18-208ENST00000479653 FAM182BQ5T319 152 aa17.16■□□□□ 0.34
CCDC18-208ENST00000479653 BRWD3Q6RI45 1802 aa17.16■□□□□ 0.34
CCDC18-208ENST00000479653 HFM1A2PYH4 1435 aa17.15■□□□□ 0.34
CCDC18-208ENST00000479653 IQGAP3Q86VI3 1631 aa17.15■□□□□ 0.34
CCDC18-208ENST00000479653 DCAF8L1A6NGE4 600 aa17.15■□□□□ 0.34
CCDC18-208ENST00000479653 KRT28Q7Z3Y7 464 aa17.15■□□□□ 0.34
CCDC18-208ENST00000479653 SPHKAPQ2M3C7 1700 aa17.14■□□□□ 0.33
CCDC18-208ENST00000479653 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.14■□□□□ 0.33
CCDC18-208ENST00000479653 MARF1Q9Y4F3 1742 aaKnown RBP17.14■□□□□ 0.33
CCDC18-208ENST00000479653 EZH2Q15910 746 aaKnown RBP17.14■□□□□ 0.33
CCDC18-208ENST00000479653 LMOD2Q6P5Q4 547 aa17.14■□□□□ 0.33
CCDC18-208ENST00000479653 NEXMIFQ5QGS0 1516 aa17.12■□□□□ 0.33
CCDC18-208ENST00000479653 ITGAEP38570 1179 aa17.11■□□□□ 0.33
CCDC18-208ENST00000479653 FAM83GA6ND36 823 aa17.1■□□□□ 0.33
CCDC18-208ENST00000479653 WAPLQ7Z5K2 1190 aa17.1■□□□□ 0.33
CCDC18-208ENST00000479653 STK26Q9P289 416 aa17.1■□□□□ 0.33
CCDC18-208ENST00000479653 PPP1R1BQ9UD71 204 aaPredicted RBP17.1■□□□□ 0.33
CCDC18-208ENST00000479653 PSME1Q06323 249 aa17.09■□□□□ 0.33
CCDC18-208ENST00000479653 NAIPQ13075 1403 aa17.08■□□□□ 0.32
CCDC18-208ENST00000479653 ROCK1Q13464 1354 aa17.08■□□□□ 0.32
CCDC18-208ENST00000479653 BTG4Q9NY30 223 aa17.07■□□□□ 0.32
CCDC18-208ENST00000479653 USP32Q8NFA0 1604 aa17.07■□□□□ 0.32
CCDC18-208ENST00000479653 CCDC144AA2RUR9 1427 aa17.06■□□□□ 0.32
CCDC18-208ENST00000479653 CAMKK2Q96RR4 588 aa17.06■□□□□ 0.32
CCDC18-208ENST00000479653 CDC42BPGQ6DT37 1551 aa17.06■□□□□ 0.32
CCDC18-208ENST00000479653 TRIM37O94972 964 aa17.05■□□□□ 0.32
CCDC18-208ENST00000479653 APBA3O96018 575 aa17.05■□□□□ 0.32
CCDC18-208ENST00000479653 PRAG1Q86YV5 1406 aa17.04■□□□□ 0.32
CCDC18-208ENST00000479653 RPGRIP1LQ68CZ1 1315 aa17.03■□□□□ 0.32
CCDC18-208ENST00000479653 SENP3-EIF4A1A0A087X0R7 540 aa17.03■□□□□ 0.32
CCDC18-208ENST00000479653 NBPF8Q3BBV2 869 aa17.03■□□□□ 0.32
CCDC18-208ENST00000479653 IFFO2Q5TF58 517 aa17.03■□□□□ 0.32
CCDC18-208ENST00000479653 NBPF14Q5TI25 921 aa17.03■□□□□ 0.32
CCDC18-208ENST00000479653 PHF8Q9UPP1 1060 aa17.03■□□□□ 0.32
CCDC18-208ENST00000479653 TNS3Q68CZ2 1445 aa17.03■□□□□ 0.32
CCDC18-208ENST00000479653 SPON1Q9HCB6 807 aa17.02■□□□□ 0.32
CCDC18-208ENST00000479653 CLTCL1P53675 1640 aa17.01■□□□□ 0.31
CCDC18-208ENST00000479653 DISP2A7MBM2 1401 aa17.01■□□□□ 0.31
CCDC18-208ENST00000479653 FAM196AQ6ZSG2 479 aa16.99■□□□□ 0.31
CCDC18-208ENST00000479653 ARHGEF10O15013 1369 aa16.99■□□□□ 0.31
CCDC18-208ENST00000479653 PLEKHH1Q9ULM0 1364 aa16.99■□□□□ 0.31
CCDC18-208ENST00000479653 SPATA31A5Q5VU36 1347 aa16.98■□□□□ 0.31
CCDC18-208ENST00000479653 SPATA31A7Q8IWB4 1347 aa16.98■□□□□ 0.31
CCDC18-208ENST00000479653 KCNQ2O43526 872 aa16.98■□□□□ 0.31
CCDC18-208ENST00000479653 TMEM132EQ6IEE7 984 aa16.98■□□□□ 0.31
CCDC18-208ENST00000479653 ZNF784Q8NCA9 323 aaPredicted RBP16.98■□□□□ 0.31
CCDC18-208ENST00000479653 RGPD1P0DJD0 1748 aa16.98■□□□□ 0.31
CCDC18-208ENST00000479653 PLCH1Q4KWH8 1693 aa16.97■□□□□ 0.31
CCDC18-208ENST00000479653 NWD2Q9ULI1 1742 aa16.97■□□□□ 0.31
CCDC18-208ENST00000479653 SBNO1A3KN83 1393 aa16.96■□□□□ 0.31
CCDC18-208ENST00000479653 PARD3Q8TEW0 1356 aa16.95■□□□□ 0.3
CCDC18-208ENST00000479653 PMFBP1Q8TBY8 1022 aa16.95■□□□□ 0.3
CCDC18-208ENST00000479653 ADGRF5Q8IZF2 1346 aa16.95■□□□□ 0.3
CCDC18-208ENST00000479653 NINLQ9Y2I6 1382 aa16.94■□□□□ 0.3
CCDC18-208ENST00000479653 KIF1BO60333 1816 aa16.93■□□□□ 0.3
CCDC18-208ENST00000479653 ABCC11Q96J66 1382 aa16.92■□□□□ 0.3
CCDC18-208ENST00000479653 KIF1AQ12756 1690 aa16.92■□□□□ 0.3
CCDC18-208ENST00000479653 PDE3BQ13370 1112 aa16.92■□□□□ 0.3
CCDC18-208ENST00000479653 C1QTNF8P60827 252 aa16.91■□□□□ 0.3
CCDC18-208ENST00000479653 ADGRB2O60241 1585 aa16.9■□□□□ 0.3
CCDC18-208ENST00000479653 TECPR2O15040 1411 aa16.9■□□□□ 0.3
CCDC18-208ENST00000479653 RGL3Q3MIN7 710 aa16.9■□□□□ 0.3
CCDC18-208ENST00000479653 PRDM11Q9NQV5 511 aa16.9■□□□□ 0.3
CCDC18-208ENST00000479653 STRN4Q9NRL3 753 aa16.9■□□□□ 0.3
CCDC18-208ENST00000479653 USP35Q9P2H5 1018 aa16.9■□□□□ 0.3
CCDC18-208ENST00000479653 UTRNP46939 3433 aa16.89■□□□□ 0.29
CCDC18-208ENST00000479653 SAFB2Q14151 953 aaKnown RBP eCLIP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms