RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 CFAP70Q5T0N1 1121 aa22■■□□□ 1.11
PRKN-207ENST00000479615 WAPLQ7Z5K2 1190 aa22■■□□□ 1.11
PRKN-207ENST00000479615 CDC42BPGQ6DT37 1551 aa21.99■■□□□ 1.11
PRKN-207ENST00000479615 LAMC1P11047 1609 aa21.99■■□□□ 1.11
PRKN-207ENST00000479615 NHSL1Q5SYE7 1610 aa21.99■■□□□ 1.11
PRKN-207ENST00000479615 ORAI2Q96SN7 254 aa21.99■■□□□ 1.11
PRKN-207ENST00000479615 SOS2Q07890 1332 aaPredicted RBP21.99■■□□□ 1.11
PRKN-207ENST00000479615 NPHP3Q7Z494 1330 aa21.98■■□□□ 1.11
PRKN-207ENST00000479615 ESCO1Q5FWF5 840 aa21.97■■□□□ 1.11
PRKN-207ENST00000479615 POTEAQ6S8J7 498 aa21.97■■□□□ 1.11
PRKN-207ENST00000479615 DCAF11Q8TEB1 546 aa21.97■■□□□ 1.11
PRKN-207ENST00000479615 KNDC1Q76NI1 1749 aa21.96■■□□□ 1.11
PRKN-207ENST00000479615 DDX17Q92841 729 aaKnown RBP21.94■■□□□ 1.1
PRKN-207ENST00000479615 PNPLA6Q8IY17 1366 aa21.94■■□□□ 1.1
PRKN-207ENST00000479615 LRP6O75581 1613 aa21.94■■□□□ 1.1
PRKN-207ENST00000479615 NUTM2BA6NNL0 878 aaPredicted RBP21.93■■□□□ 1.1
PRKN-207ENST00000479615 NUTM2EB1AL46 878 aaPredicted RBP21.93■■□□□ 1.1
PRKN-207ENST00000479615 NUTM2AQ8IVF1 878 aaPredicted RBP21.93■■□□□ 1.1
PRKN-207ENST00000479615 PLEKHH1Q9ULM0 1364 aa21.92■■□□□ 1.1
PRKN-207ENST00000479615 KDM2AQ9Y2K7 1162 aa21.92■■□□□ 1.1
PRKN-207ENST00000479615 POGKQ9P215 609 aa21.91■■□□□ 1.1
PRKN-207ENST00000479615 DLC1Q96QB1 1528 aa21.9■■□□□ 1.1
PRKN-207ENST00000479615 PRAM1Q96QH2 718 aa21.9■■□□□ 1.1
PRKN-207ENST00000479615 FOXO3O43524 673 aa21.88■■□□□ 1.09
PRKN-207ENST00000479615 NUTM2FA1L443 756 aa21.85■■□□□ 1.09
PRKN-207ENST00000479615 ADGRB1O14514 1584 aa21.85■■□□□ 1.09
PRKN-207ENST00000479615 RXRBP28702 533 aa21.84■■□□□ 1.09
PRKN-207ENST00000479615 TRAK1Q9UPV9 953 aa21.84■■□□□ 1.09
PRKN-207ENST00000479615 EIF3AQ14152 1382 aaKnown RBP21.84■■□□□ 1.09
PRKN-207ENST00000479615 AFF2P51816 1311 aa21.83■■□□□ 1.09
PRKN-207ENST00000479615 PSME1Q06323 249 aa21.83■■□□□ 1.09
PRKN-207ENST00000479615 C8orf37Q96NL8 207 aa21.83■■□□□ 1.09
PRKN-207ENST00000479615 NGLY1Q96IV0 654 aa21.82■■□□□ 1.08
PRKN-207ENST00000479615 PHF8Q9UPP1 1060 aa21.82■■□□□ 1.08
PRKN-207ENST00000479615 PXDNQ92626 1479 aa21.82■■□□□ 1.08
PRKN-207ENST00000479615 ANKARQ7Z5J8 1434 aa21.81■■□□□ 1.08
PRKN-207ENST00000479615 SAFB2Q14151 953 aaKnown RBP eCLIP21.81■■□□□ 1.08
PRKN-207ENST00000479615 FMN2Q9NZ56 1722 aa21.8■■□□□ 1.08
PRKN-207ENST00000479615 KIF1AQ12756 1690 aa21.79■■□□□ 1.08
PRKN-207ENST00000479615 ADAMTS2O95450 1211 aa21.79■■□□□ 1.08
PRKN-207ENST00000479615 KRT28Q7Z3Y7 464 aa21.79■■□□□ 1.08
PRKN-207ENST00000479615 SPATA31A3Q5VYP0 1347 aa21.78■■□□□ 1.08
PRKN-207ENST00000479615 CDK12Q9NYV4 1490 aaPredicted RBP21.77■■□□□ 1.08
PRKN-207ENST00000479615 QTRT2Q9H974 415 aaKnown RBP21.77■■□□□ 1.08
PRKN-207ENST00000479615 COL22A1Q8NFW1 1626 aaPredicted RBP21.77■■□□□ 1.07
PRKN-207ENST00000479615 WASLO00401 505 aaPredicted RBP21.76■■□□□ 1.07
PRKN-207ENST00000479615 ADGRB2O60241 1585 aa21.76■■□□□ 1.07
PRKN-207ENST00000479615 RBM6P78332 1123 aaKnown RBP21.76■■□□□ 1.07
PRKN-207ENST00000479615 XPCQ01831 940 aaPredicted RBP21.76■■□□□ 1.07
PRKN-207ENST00000479615 FNBP4Q8N3X1 1017 aaPredicted RBP21.76■■□□□ 1.07
PRKN-207ENST00000479615 SBNO1A3KN83 1393 aa21.74■■□□□ 1.07
PRKN-207ENST00000479615 MINK1Q8N4C8 1332 aaPredicted RBP21.74■■□□□ 1.07
PRKN-207ENST00000479615 USP21Q9UK80 565 aa21.73■■□□□ 1.07
PRKN-207ENST00000479615 TRPC5Q9UL62 973 aaPredicted RBP21.73■■□□□ 1.07
PRKN-207ENST00000479615 HIRIP3Q9BW71 556 aaPredicted RBP21.72■■□□□ 1.07
PRKN-207ENST00000479615 ARHGEF10O15013 1369 aa21.71■■□□□ 1.07
PRKN-207ENST00000479615 GPRASP1Q5JY77 1395 aa21.7■■□□□ 1.06
PRKN-207ENST00000479615 TNS3Q68CZ2 1445 aa21.7■■□□□ 1.06
PRKN-207ENST00000479615 KIAA1210Q9ULL0 1709 aa21.69■■□□□ 1.06
PRKN-207ENST00000479615 TULP4Q9NRJ4 1543 aa21.69■■□□□ 1.06
PRKN-207ENST00000479615 PMFBP1Q8TBY8 1022 aa21.68■■□□□ 1.06
PRKN-207ENST00000479615 HAP1P54257 671 aaPredicted RBP21.67■■□□□ 1.06
PRKN-207ENST00000479615 L3MBTL2Q969R5 705 aa21.66■■□□□ 1.06
PRKN-207ENST00000479615 NGDNQ8NEJ9 315 aaKnown RBP21.65■■□□□ 1.06
PRKN-207ENST00000479615 PRR36Q9H6K5 1346 aa21.64■■□□□ 1.05
PRKN-207ENST00000479615 NBPF1Q3BBV0 1214 aa21.64■■□□□ 1.05
PRKN-207ENST00000479615 LMOD2Q6P5Q4 547 aa21.64■■□□□ 1.05
PRKN-207ENST00000479615 NUDT16Q96DE0 195 aaKnown RBP21.64■■□□□ 1.05
PRKN-207ENST00000479615 CDK19Q9BWU1 502 aa21.63■■□□□ 1.05
PRKN-207ENST00000479615 USP32Q8NFA0 1604 aa21.62■■□□□ 1.05
PRKN-207ENST00000479615 CCDC61Q9Y6R9 512 aa21.62■■□□□ 1.05
PRKN-207ENST00000479615 ARHGEF28Q8N1W1 1705 aaKnown RBP21.62■■□□□ 1.05
PRKN-207ENST00000479615 ATRNO75882 1429 aa21.62■■□□□ 1.05
PRKN-207ENST00000479615 BCL9LQ86UU0 1499 aa21.61■■□□□ 1.05
PRKN-207ENST00000479615 UNC5CLQ8IV45 518 aa21.61■■□□□ 1.05
PRKN-207ENST00000479615 SIN3AQ96ST3 1273 aa21.61■■□□□ 1.05
PRKN-207ENST00000479615 RGPD8O14715 1765 aaPredicted RBP21.61■■□□□ 1.05
PRKN-207ENST00000479615 CENPJQ9HC77 1338 aaPredicted RBP21.6■■□□□ 1.05
PRKN-207ENST00000479615 NEUROD1Q13562 356 aa21.6■■□□□ 1.05
PRKN-207ENST00000479615 UPF1Q92900 1129 aaKnown RBP eCLIP21.6■■□□□ 1.05
PRKN-207ENST00000479615 TRIM26Q12899 539 aaPredicted RBP21.59■■□□□ 1.05
PRKN-207ENST00000479615 RGS12O14924 1447 aa21.58■■□□□ 1.05
PRKN-207ENST00000479615 GJD4Q96KN9 370 aaPredicted RBP21.58■■□□□ 1.05
PRKN-207ENST00000479615 SLIT2O94813 1529 aa21.57■■□□□ 1.04
PRKN-207ENST00000479615 PLEKHG3A1L390 1219 aa21.57■■□□□ 1.04
PRKN-207ENST00000479615 ATP7BP35670 1465 aa21.57■■□□□ 1.04
PRKN-207ENST00000479615 MARF1Q9Y4F3 1742 aaKnown RBP21.56■■□□□ 1.04
PRKN-207ENST00000479615 CABLES1Q8TDN4 633 aa21.56■■□□□ 1.04
PRKN-207ENST00000479615 PAK3O75914 559 aaPredicted RBP21.55■■□□□ 1.04
PRKN-207ENST00000479615 POLR3AO14802 1390 aaPredicted RBP21.54■■□□□ 1.04
PRKN-207ENST00000479615 ATAD2Q6PL18 1390 aa21.53■■□□□ 1.04
PRKN-207ENST00000479615 ITSN1Q15811 1721 aa21.53■■□□□ 1.04
PRKN-207ENST00000479615 SRPK2P78362 688 aaKnown RBP21.53■■□□□ 1.04
PRKN-207ENST00000479615 ROCK2O75116 1388 aaKnown RBP21.52■■□□□ 1.04
PRKN-207ENST00000479615 VPS72Q15906 364 aa21.52■■□□□ 1.04
PRKN-207ENST00000479615 NBPF8Q3BBV2 869 aa21.52■■□□□ 1.04
PRKN-207ENST00000479615 BRD4O60885 1362 aaPredicted RBP21.51■■□□□ 1.03
PRKN-207ENST00000479615 ACEP12821 1306 aa21.51■■□□□ 1.03
PRKN-207ENST00000479615 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.5■■□□□ 1.03
PRKN-207ENST00000479615 TRPM3Q9HCF6 1732 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms