RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 MARF1Q9Y4F3 1742 aaKnown RBP26.59■■□□□ 1.85
HMGN1-212ENST00000479586 KIF1BO60333 1816 aa26.58■■□□□ 1.84
HMGN1-212ENST00000479586 PRAG1Q86YV5 1406 aa26.57■■□□□ 1.84
HMGN1-212ENST00000479586 PXDNQ92626 1479 aa26.56■■□□□ 1.84
HMGN1-212ENST00000479586 GJD4Q96KN9 370 aaPredicted RBP26.55■■□□□ 1.84
HMGN1-212ENST00000479586 NPHP3Q7Z494 1330 aa26.54■■□□□ 1.84
HMGN1-212ENST00000479586 HFM1A2PYH4 1435 aa26.54■■□□□ 1.84
HMGN1-212ENST00000479586 XPCQ01831 940 aaPredicted RBP26.53■■□□□ 1.84
HMGN1-212ENST00000479586 ESCO1Q5FWF5 840 aa26.52■■□□□ 1.84
HMGN1-212ENST00000479586 CDC42BPGQ6DT37 1551 aa26.51■■□□□ 1.83
HMGN1-212ENST00000479586 VGFO15240 615 aaPredicted RBP26.51■■□□□ 1.83
HMGN1-212ENST00000479586 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.51■■□□□ 1.83
HMGN1-212ENST00000479586 GLI3P10071 1580 aa26.5■■□□□ 1.83
HMGN1-212ENST00000479586 BLMP54132 1417 aaPredicted RBP26.49■■□□□ 1.83
HMGN1-212ENST00000479586 FOXO3O43524 673 aa26.49■■□□□ 1.83
HMGN1-212ENST00000479586 RALGAPBQ86X10 1494 aa26.49■■□□□ 1.83
HMGN1-212ENST00000479586 DEFB132Q7Z7B7 95 aa26.46■■□□□ 1.83
HMGN1-212ENST00000479586 SLIT2O94813 1529 aa26.44■■□□□ 1.82
HMGN1-212ENST00000479586 BRWD3Q6RI45 1802 aa26.44■■□□□ 1.82
HMGN1-212ENST00000479586 UNC5CLQ8IV45 518 aa26.44■■□□□ 1.82
HMGN1-212ENST00000479586 PPLO60437 1756 aa26.43■■□□□ 1.82
HMGN1-212ENST00000479586 NAIPQ13075 1403 aa26.42■■□□□ 1.82
HMGN1-212ENST00000479586 NUTM2FA1L443 756 aa26.42■■□□□ 1.82
HMGN1-212ENST00000479586 RPGRIP1LQ68CZ1 1315 aa26.4■■□□□ 1.82
HMGN1-212ENST00000479586 LRPPRCP42704 1394 aaKnown RBP26.4■■□□□ 1.82
HMGN1-212ENST00000479586 LRP5O75197 1615 aa26.39■■□□□ 1.82
HMGN1-212ENST00000479586 USP32Q8NFA0 1604 aa26.38■■□□□ 1.81
HMGN1-212ENST00000479586 SPATA31A3Q5VYP0 1347 aa26.36■■□□□ 1.81
HMGN1-212ENST00000479586 SF3B2Q13435 895 aaKnown RBP26.35■■□□□ 1.81
HMGN1-212ENST00000479586 WAPLQ7Z5K2 1190 aa26.35■■□□□ 1.81
HMGN1-212ENST00000479586 PPARGC1BQ86YN6 1023 aaKnown RBP26.35■■□□□ 1.81
HMGN1-212ENST00000479586 SEPT12Q8IYM1 358 aa26.35■■□□□ 1.81
HMGN1-212ENST00000479586 STK26Q9P289 416 aa26.33■■□□□ 1.81
HMGN1-212ENST00000479586 TECPR2O15040 1411 aa26.32■■□□□ 1.8
HMGN1-212ENST00000479586 PLEKHH1Q9ULM0 1364 aa26.32■■□□□ 1.8
HMGN1-212ENST00000479586 CCDC144AA2RUR9 1427 aa26.31■■□□□ 1.8
HMGN1-212ENST00000479586 FMN2Q9NZ56 1722 aa26.31■■□□□ 1.8
HMGN1-212ENST00000479586 KIF1AQ12756 1690 aa26.31■■□□□ 1.8
HMGN1-212ENST00000479586 ADGRF5Q8IZF2 1346 aa26.3■■□□□ 1.8
HMGN1-212ENST00000479586 PLCH1Q4KWH8 1693 aa26.29■■□□□ 1.8
HMGN1-212ENST00000479586 VPS72Q15906 364 aa26.29■■□□□ 1.8
HMGN1-212ENST00000479586 PSDA5PKW4 1024 aaPredicted RBP26.28■■□□□ 1.8
HMGN1-212ENST00000479586 KRT28Q7Z3Y7 464 aa26.28■■□□□ 1.8
HMGN1-212ENST00000479586 KRT27Q7Z3Y8 459 aa26.27■■□□□ 1.8
HMGN1-212ENST00000479586 CABLES1Q8TDN4 633 aa26.27■■□□□ 1.8
HMGN1-212ENST00000479586 RRBP1Q9P2E9 1410 aaKnown RBP26.27■■□□□ 1.8
HMGN1-212ENST00000479586 KNDC1Q76NI1 1749 aa26.26■■□□□ 1.79
HMGN1-212ENST00000479586 PLEKHG5O94827 1062 aa26.26■■□□□ 1.79
HMGN1-212ENST00000479586 HAP1P54257 671 aaPredicted RBP26.26■■□□□ 1.79
HMGN1-212ENST00000479586 NWD2Q9ULI1 1742 aa26.25■■□□□ 1.79
HMGN1-212ENST00000479586 TNS3Q68CZ2 1445 aa26.25■■□□□ 1.79
HMGN1-212ENST00000479586 ONECUT3O60422 494 aaPredicted RBP26.25■■□□□ 1.79
HMGN1-212ENST00000479586 CCDC9Q9Y3X0 531 aaKnown RBP26.25■■□□□ 1.79
HMGN1-212ENST00000479586 ABCC11Q96J66 1382 aa26.24■■□□□ 1.79
HMGN1-212ENST00000479586 SLC4A1APQ9BWU0 796 aaKnown RBP26.24■■□□□ 1.79
HMGN1-212ENST00000479586 ABCA3Q99758 1704 aa26.23■■□□□ 1.79
HMGN1-212ENST00000479586 TMEM132EQ6IEE7 984 aa26.23■■□□□ 1.79
HMGN1-212ENST00000479586 HRCP23327 699 aa26.22■■□□□ 1.79
HMGN1-212ENST00000479586 RGPD8O14715 1765 aaPredicted RBP26.21■■□□□ 1.79
HMGN1-212ENST00000479586 IFT172Q9UG01 1749 aa26.19■■□□□ 1.78
HMGN1-212ENST00000479586 BAG6P46379 1132 aa26.19■■□□□ 1.78
HMGN1-212ENST00000479586 A0A0G2JS52 829 aa26.18■■□□□ 1.78
HMGN1-212ENST00000479586 MYT1Q01538 1121 aa26.18■■□□□ 1.78
HMGN1-212ENST00000479586 RGL3Q3MIN7 710 aa26.18■■□□□ 1.78
HMGN1-212ENST00000479586 PHF8Q9UPP1 1060 aa26.18■■□□□ 1.78
HMGN1-212ENST00000479586 YTHDC2Q9H6S0 1430 aaKnown RBP26.16■■□□□ 1.78
HMGN1-212ENST00000479586 FAM83GA6ND36 823 aa26.16■■□□□ 1.78
HMGN1-212ENST00000479586 PSME1Q06323 249 aa26.16■■□□□ 1.78
HMGN1-212ENST00000479586 LMOD2Q6P5Q4 547 aa26.16■■□□□ 1.78
HMGN1-212ENST00000479586 SPATA31E1Q6ZUB1 1445 aa26.15■■□□□ 1.78
HMGN1-212ENST00000479586 SBNO1A3KN83 1393 aa26.15■■□□□ 1.78
HMGN1-212ENST00000479586 ANKRD30BQ9BXX2 1392 aa26.15■■□□□ 1.78
HMGN1-212ENST00000479586 PIK3C2GO75747 1445 aa26.14■■□□□ 1.78
HMGN1-212ENST00000479586 NRAPQ86VF7 1730 aa26.14■■□□□ 1.78
HMGN1-212ENST00000479586 FAM98CQ17RN3 349 aaKnown RBP26.14■■□□□ 1.78
HMGN1-212ENST00000479586 NRXN1Q9ULB1 1477 aa26.14■■□□□ 1.78
HMGN1-212ENST00000479586 ARHGEF10O15013 1369 aa26.13■■□□□ 1.77
HMGN1-212ENST00000479586 EN1Q05925 392 aaPredicted RBP26.12■■□□□ 1.77
HMGN1-212ENST00000479586 RGPD1P0DJD0 1748 aa26.11■■□□□ 1.77
HMGN1-212ENST00000479586 R3HDM1Q15032 1099 aaKnown RBP26.09■■□□□ 1.77
HMGN1-212ENST00000479586 FAM182BQ5T319 152 aa26.09■■□□□ 1.77
HMGN1-212ENST00000479586 SIRT1Q96EB6 747 aa26.07■■□□□ 1.76
HMGN1-212ENST00000479586 BTG4Q9NY30 223 aa26.07■■□□□ 1.76
HMGN1-212ENST00000479586 TNS1Q9HBL0 1735 aaKnown RBP26.05■■□□□ 1.76
HMGN1-212ENST00000479586 SAFB2Q14151 953 aaKnown RBP eCLIP26.04■■□□□ 1.76
HMGN1-212ENST00000479586 PMFBP1Q8TBY8 1022 aa26.04■■□□□ 1.76
HMGN1-212ENST00000479586 TRPM3Q9HCF6 1732 aaPredicted RBP26.03■■□□□ 1.76
HMGN1-212ENST00000479586 COL14A1Q05707 1796 aaKnown RBP26.03■■□□□ 1.76
HMGN1-212ENST00000479586 DISP2A7MBM2 1401 aa26.03■■□□□ 1.76
HMGN1-212ENST00000479586 PRAM1Q96QH2 718 aa26.01■■□□□ 1.75
HMGN1-212ENST00000479586 THSD7AQ9UPZ6 1657 aa26.01■■□□□ 1.75
HMGN1-212ENST00000479586 SPATA31A5Q5VU36 1347 aa26■■□□□ 1.75
HMGN1-212ENST00000479586 SPATA31A7Q8IWB4 1347 aa26■■□□□ 1.75
HMGN1-212ENST00000479586 C14orf93Q9H972 538 aaKnown RBP26■■□□□ 1.75
HMGN1-212ENST00000479586 ALS2Q96Q42 1657 aa25.99■■□□□ 1.75
HMGN1-212ENST00000479586 ANKARQ7Z5J8 1434 aa25.99■■□□□ 1.75
HMGN1-212ENST00000479586 EZH2Q15910 746 aaKnown RBP25.99■■□□□ 1.75
HMGN1-212ENST00000479586 DHX57Q6P158 1386 aaKnown RBP25.98■■□□□ 1.75
HMGN1-212ENST00000479586 CFAP70Q5T0N1 1121 aa25.98■■□□□ 1.75
HMGN1-212ENST00000479586 ADGRB2O60241 1585 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms