RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 TRAK1Q9UPV9 953 aa31.98■■■□□ 2.71
SYNGAP1-206ENST00000479510 OSCARQ8IYS5 282 aa31.98■■■□□ 2.71
SYNGAP1-206ENST00000479510 NSD2O96028 1365 aa31.98■■■□□ 2.71
SYNGAP1-206ENST00000479510 WWC1Q8IX03 1113 aa31.97■■■□□ 2.71
SYNGAP1-206ENST00000479510 CGNL1Q0VF96 1302 aa31.96■■■□□ 2.71
SYNGAP1-206ENST00000479510 FAM161AQ3B820 660 aa31.96■■■□□ 2.71
SYNGAP1-206ENST00000479510 PPM1GO15355 546 aaPredicted RBP31.95■■■□□ 2.7
SYNGAP1-206ENST00000479510 RUNDC1Q96C34 613 aa31.95■■■□□ 2.7
SYNGAP1-206ENST00000479510 IQSEC2Q5JU85 1478 aa31.94■■■□□ 2.7
SYNGAP1-206ENST00000479510 ARHGAP31Q2M1Z3 1444 aa31.94■■■□□ 2.7
SYNGAP1-206ENST00000479510 GGT6Q6P531 493 aa31.94■■■□□ 2.7
SYNGAP1-206ENST00000479510 GLI2P10070 1586 aa31.93■■■□□ 2.7
SYNGAP1-206ENST00000479510 VGFO15240 615 aaPredicted RBP31.93■■■□□ 2.7
SYNGAP1-206ENST00000479510 AAMPQ13685 434 aa31.92■■■□□ 2.7
SYNGAP1-206ENST00000479510 PHF23Q9BUL5 403 aaPredicted RBP31.92■■■□□ 2.7
SYNGAP1-206ENST00000479510 SLC12A5Q9H2X9 1139 aa31.91■■■□□ 2.7
SYNGAP1-206ENST00000479510 BCAR3O75815 825 aa31.91■■■□□ 2.7
SYNGAP1-206ENST00000479510 EVC2Q86UK5 1308 aa31.91■■■□□ 2.7
SYNGAP1-206ENST00000479510 ZFYVE9O95405 1425 aa31.9■■■□□ 2.7
SYNGAP1-206ENST00000479510 NEXMIFQ5QGS0 1516 aa31.9■■■□□ 2.7
SYNGAP1-206ENST00000479510 CCDC27Q2M243 656 aa31.9■■■□□ 2.7
SYNGAP1-206ENST00000479510 WDR63Q8IWG1 891 aa31.9■■■□□ 2.7
SYNGAP1-206ENST00000479510 CFAP53Q96M91 514 aa31.9■■■□□ 2.7
SYNGAP1-206ENST00000479510 ANKRD36BQ8N2N9 1353 aa31.89■■■□□ 2.7
SYNGAP1-206ENST00000479510 SKAP1Q86WV1 359 aa31.88■■■□□ 2.69
SYNGAP1-206ENST00000479510 DMRT2Q9Y5R5 561 aa31.88■■■□□ 2.69
SYNGAP1-206ENST00000479510 ARHGEF28Q8N1W1 1705 aaKnown RBP31.88■■■□□ 2.69
SYNGAP1-206ENST00000479510 C8orf34Q49A92 452 aa31.87■■■□□ 2.69
SYNGAP1-206ENST00000479510 SIGLEC1Q9BZZ2 1709 aa31.86■■■□□ 2.69
SYNGAP1-206ENST00000479510 TMEM132EQ6IEE7 984 aa31.85■■■□□ 2.69
SYNGAP1-206ENST00000479510 TULP4Q9NRJ4 1543 aa31.85■■■□□ 2.69
SYNGAP1-206ENST00000479510 DIP2CQ9Y2E4 1556 aa31.84■■■□□ 2.69
SYNGAP1-206ENST00000479510 CFAP65Q6ZU64 1925 aaKnown RBP31.83■■■□□ 2.69
SYNGAP1-206ENST00000479510 TCP11L2Q8N4U5 519 aa31.81■■■□□ 2.68
SYNGAP1-206ENST00000479510 MTHFSP49914 203 aa31.79■■■□□ 2.68
SYNGAP1-206ENST00000479510 CLUAP1Q96AJ1 413 aa31.79■■■□□ 2.68
SYNGAP1-206ENST00000479510 SLC52A1Q9NWF4 448 aa31.79■■■□□ 2.68
SYNGAP1-206ENST00000479510 MAPK8IP3Q9UPT6 1336 aa31.77■■■□□ 2.68
SYNGAP1-206ENST00000479510 CANXP27824 592 aaKnown RBP31.77■■■□□ 2.68
SYNGAP1-206ENST00000479510 RARSP54136 660 aaKnown RBP31.76■■■□□ 2.67
SYNGAP1-206ENST00000479510 NEFMP07197 916 aa31.74■■■□□ 2.67
SYNGAP1-206ENST00000479510 ADGRB2O60241 1585 aa31.74■■■□□ 2.67
SYNGAP1-206ENST00000479510 TNNT2P45379 298 aaPredicted RBP31.73■■■□□ 2.67
SYNGAP1-206ENST00000479510 LAS1LQ9Y4W2 734 aaKnown RBP31.73■■■□□ 2.67
SYNGAP1-206ENST00000479510 ZMYM3Q14202 1370 aa31.73■■■□□ 2.67
SYNGAP1-206ENST00000479510 MYH16Q9H6N6 1097 aa31.72■■■□□ 2.67
SYNGAP1-206ENST00000479510 RICTORQ6R327 1708 aa31.71■■■□□ 2.67
SYNGAP1-206ENST00000479510 ABCC11Q96J66 1382 aa31.71■■■□□ 2.67
SYNGAP1-206ENST00000479510 RGS3P49796 1198 aa31.71■■■□□ 2.67
SYNGAP1-206ENST00000479510 DAXXQ9UER7 740 aaPredicted RBP31.71■■■□□ 2.67
SYNGAP1-206ENST00000479510 VIRMAQ69YN4 1812 aaKnown RBP31.71■■■□□ 2.67
SYNGAP1-206ENST00000479510 IGHDP01880 384 aa31.71■■■□□ 2.67
SYNGAP1-206ENST00000479510 CT47B1P0C2W7 299 aaPredicted RBP31.7■■■□□ 2.67
SYNGAP1-206ENST00000479510 PMFBP1Q8TBY8 1022 aa31.69■■■□□ 2.66
SYNGAP1-206ENST00000479510 MED14O60244 1454 aa31.69■■■□□ 2.66
SYNGAP1-206ENST00000479510 RAPGEF3O95398 923 aa31.68■■■□□ 2.66
SYNGAP1-206ENST00000479510 IDI1Q13907 227 aa31.68■■■□□ 2.66
SYNGAP1-206ENST00000479510 PANK1Q8TE04 598 aa31.68■■■□□ 2.66
SYNGAP1-206ENST00000479510 COG6Q9Y2V7 657 aa31.68■■■□□ 2.66
SYNGAP1-206ENST00000479510 ATAD2Q6PL18 1390 aa31.67■■■□□ 2.66
SYNGAP1-206ENST00000479510 RRP7AQ9Y3A4 280 aaKnown RBP31.66■■■□□ 2.66
SYNGAP1-206ENST00000479510 NEUROD2Q15784 382 aa31.66■■■□□ 2.66
SYNGAP1-206ENST00000479510 CLTCQ00610 1675 aaKnown RBP31.64■■■□□ 2.66
SYNGAP1-206ENST00000479510 TMEM131LA2VDJ0 1609 aa31.64■■■□□ 2.65
SYNGAP1-206ENST00000479510 CABP2Q9NPB3 220 aa31.63■■■□□ 2.65
SYNGAP1-206ENST00000479510 A0A1W2PP64 1363 aa31.62■■■□□ 2.65
SYNGAP1-206ENST00000479510 PREX1Q8TCU6 1659 aa31.62■■■□□ 2.65
SYNGAP1-206ENST00000479510 U2AF1L5P0DN76 240 aaPredicted RBP31.61■■■□□ 2.65
SYNGAP1-206ENST00000479510 U2AF1Q01081 240 aaKnown RBP eCLIP31.61■■■□□ 2.65
SYNGAP1-206ENST00000479510 FRAT1Q92837 279 aaPredicted RBP31.61■■■□□ 2.65
SYNGAP1-206ENST00000479510 PTPRMP28827 1452 aa31.61■■■□□ 2.65
SYNGAP1-206ENST00000479510 ANKRD26Q9UPS8 1709 aa31.61■■■□□ 2.65
SYNGAP1-206ENST00000479510 TERF2IPQ9NYB0 399 aa31.59■■■□□ 2.65
SYNGAP1-206ENST00000479510 COL3A1P02461 1466 aaPredicted RBP31.59■■■□□ 2.65
SYNGAP1-206ENST00000479510 NUTM2DQ5VT03 806 aaPredicted RBP31.56■■■□□ 2.64
SYNGAP1-206ENST00000479510 IL16Q14005 1332 aa31.55■■■□□ 2.64
SYNGAP1-206ENST00000479510 YTHDC2Q9H6S0 1430 aaKnown RBP31.55■■■□□ 2.64
SYNGAP1-206ENST00000479510 SRPK2P78362 688 aaKnown RBP31.54■■■□□ 2.64
SYNGAP1-206ENST00000479510 YEATS2Q9ULM3 1422 aa31.54■■■□□ 2.64
SYNGAP1-206ENST00000479510 PLEKHF1Q96S99 279 aa31.53■■■□□ 2.64
SYNGAP1-206ENST00000479510 RWDD1Q9H446 243 aaPredicted RBP31.53■■■□□ 2.64
SYNGAP1-206ENST00000479510 RLBP1P12271 317 aa31.52■■■□□ 2.64
SYNGAP1-206ENST00000479510 NLRP1Q9C000 1473 aa31.52■■■□□ 2.64
SYNGAP1-206ENST00000479510 MYO5BQ9ULV0 1848 aa31.52■■■□□ 2.64
SYNGAP1-206ENST00000479510 PNNQ9H307 717 aaKnown RBP31.51■■■□□ 2.63
SYNGAP1-206ENST00000479510 NFKBIBQ15653 356 aa31.5■■■□□ 2.63
SYNGAP1-206ENST00000479510 ZKSCAN2Q63HK3 967 aa31.5■■■□□ 2.63
SYNGAP1-206ENST00000479510 PCDHB15Q9Y5E8 787 aa31.5■■■□□ 2.63
SYNGAP1-206ENST00000479510 CD163L1Q9NR16 1453 aa31.5■■■□□ 2.63
SYNGAP1-206ENST00000479510 USP19O94966 1318 aa31.5■■■□□ 2.63
SYNGAP1-206ENST00000479510 MVPQ14764 893 aaKnown RBP31.49■■■□□ 2.63
SYNGAP1-206ENST00000479510 PNPLA6Q8IY17 1366 aa31.47■■■□□ 2.63
SYNGAP1-206ENST00000479510 TMPOP42166 694 aaKnown RBP31.47■■■□□ 2.63
SYNGAP1-206ENST00000479510 STK26Q9P289 416 aa31.47■■■□□ 2.63
SYNGAP1-206ENST00000479510 FYB1O15117 783 aa31.47■■■□□ 2.63
SYNGAP1-206ENST00000479510 SLC4A3P48751 1232 aa31.47■■■□□ 2.63
SYNGAP1-206ENST00000479510 ALKQ9UM73 1620 aa31.46■■■□□ 2.63
SYNGAP1-206ENST00000479510 SAFB2Q14151 953 aaKnown RBP eCLIP31.45■■■□□ 2.63
SYNGAP1-206ENST00000479510 HDGFL2Q7Z4V5 671 aaPredicted RBP31.45■■■□□ 2.63
SYNGAP1-206ENST00000479510 PRAM1Q96QH2 718 aa31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms