RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 PLEKHH1Q9ULM0 1364 aa35.66■■■■□ 3.3
PERM1-203ENST00000479361 NALCNQ8IZF0 1738 aa35.66■■■■□ 3.3
PERM1-203ENST00000479361 RALGAPBQ86X10 1494 aa35.64■■■■□ 3.3
PERM1-203ENST00000479361 PIP4K2BP78356 416 aa35.63■■■■□ 3.29
PERM1-203ENST00000479361 SCAF1Q9H7N4 1312 aaKnown RBP35.62■■■■□ 3.29
PERM1-203ENST00000479361 GPRASP1Q5JY77 1395 aa35.61■■■■□ 3.29
PERM1-203ENST00000479361 SLAIN2Q9P270 581 aa35.6■■■■□ 3.29
PERM1-203ENST00000479361 SAFB2Q14151 953 aaKnown RBP eCLIP35.59■■■■□ 3.29
PERM1-203ENST00000479361 ARHGEF28Q8N1W1 1705 aaKnown RBP35.58■■■■□ 3.29
PERM1-203ENST00000479361 ILDR1Q86SU0 546 aaPredicted RBP35.56■■■■□ 3.28
PERM1-203ENST00000479361 CARD11Q9BXL7 1154 aa35.56■■■■□ 3.28
PERM1-203ENST00000479361 CDC42BPGQ6DT37 1551 aa35.55■■■■□ 3.28
PERM1-203ENST00000479361 EIF3AQ14152 1382 aaKnown RBP35.51■■■■□ 3.28
PERM1-203ENST00000479361 MST1RQ04912 1400 aa35.5■■■■□ 3.27
PERM1-203ENST00000479361 CENPJQ9HC77 1338 aaPredicted RBP35.49■■■■□ 3.27
PERM1-203ENST00000479361 MINK1Q8N4C8 1332 aaPredicted RBP35.48■■■■□ 3.27
PERM1-203ENST00000479361 ADGRB2O60241 1585 aa35.47■■■■□ 3.27
PERM1-203ENST00000479361 HIRIP3Q9BW71 556 aaPredicted RBP35.44■■■■□ 3.26
PERM1-203ENST00000479361 C1orf167Q5SNV9 1468 aa35.43■■■■□ 3.26
PERM1-203ENST00000479361 ROBO1Q9Y6N7 1651 aa35.43■■■■□ 3.26
PERM1-203ENST00000479361 FMN2Q9NZ56 1722 aa35.39■■■■□ 3.26
PERM1-203ENST00000479361 WASLO00401 505 aaPredicted RBP35.38■■■■□ 3.25
PERM1-203ENST00000479361 BRINP3Q76B58 766 aa35.38■■■■□ 3.25
PERM1-203ENST00000479361 QRICH2Q9H0J4 1663 aa35.37■■■■□ 3.25
PERM1-203ENST00000479361 NUTM2FA1L443 756 aa35.36■■■■□ 3.25
PERM1-203ENST00000479361 ANKARQ7Z5J8 1434 aa35.33■■■■□ 3.25
PERM1-203ENST00000479361 HSPA1LP34931 641 aa35.32■■■■□ 3.24
PERM1-203ENST00000479361 ESCO1Q5FWF5 840 aa35.32■■■■□ 3.24
PERM1-203ENST00000479361 ORAI2Q96SN7 254 aa35.31■■■■□ 3.24
PERM1-203ENST00000479361 CDK19Q9BWU1 502 aa35.3■■■■□ 3.24
PERM1-203ENST00000479361 TULP4Q9NRJ4 1543 aa35.3■■■■□ 3.24
PERM1-203ENST00000479361 USP47Q96K76 1375 aa35.29■■■■□ 3.24
PERM1-203ENST00000479361 SBNO2Q9Y2G9 1366 aa35.29■■■■□ 3.24
PERM1-203ENST00000479361 EVC2Q86UK5 1308 aa35.27■■■■□ 3.24
PERM1-203ENST00000479361 AHDC1Q5TGY3 1603 aaPredicted RBP35.24■■■■□ 3.23
PERM1-203ENST00000479361 ST20-MTHFSA0A0A6YYL1 179 aa35.23■■■■□ 3.23
PERM1-203ENST00000479361 SLC24A1O60721 1099 aa35.23■■■■□ 3.23
PERM1-203ENST00000479361 SRPK2P78362 688 aaKnown RBP35.23■■■■□ 3.23
PERM1-203ENST00000479361 USP32Q8NFA0 1604 aa35.21■■■■□ 3.23
PERM1-203ENST00000479361 NUDT16Q96DE0 195 aaKnown RBP35.21■■■■□ 3.23
PERM1-203ENST00000479361 PRR36Q9H6K5 1346 aa35.21■■■■□ 3.23
PERM1-203ENST00000479361 PHF8Q9UPP1 1060 aa35.2■■■■□ 3.23
PERM1-203ENST00000479361 PHLPP1O60346 1717 aa35.2■■■■□ 3.23
PERM1-203ENST00000479361 KIF1AQ12756 1690 aa35.19■■■■□ 3.22
PERM1-203ENST00000479361 NHSL1Q5SYE7 1610 aa35.18■■■■□ 3.22
PERM1-203ENST00000479361 ATP7BP35670 1465 aa35.18■■■■□ 3.22
PERM1-203ENST00000479361 NPHP3Q7Z494 1330 aa35.18■■■■□ 3.22
PERM1-203ENST00000479361 RGPD8O14715 1765 aaPredicted RBP35.18■■■■□ 3.22
PERM1-203ENST00000479361 CABP2Q9NPB3 220 aa35.16■■■■□ 3.22
PERM1-203ENST00000479361 CCDC61Q9Y6R9 512 aa35.16■■■■□ 3.22
PERM1-203ENST00000479361 FOXO3O43524 673 aa35.15■■■■□ 3.22
PERM1-203ENST00000479361 DDX17Q92841 729 aaKnown RBP35.15■■■■□ 3.22
PERM1-203ENST00000479361 TESK2Q96S53 571 aa35.14■■■■□ 3.22
PERM1-203ENST00000479361 ITSN1Q15811 1721 aa35.13■■■■□ 3.21
PERM1-203ENST00000479361 COL16A1Q07092 1604 aaPredicted RBP35.13■■■■□ 3.21
PERM1-203ENST00000479361 EIF4G2P78344 907 aaKnown RBP eCLIP35.12■■■■□ 3.21
PERM1-203ENST00000479361 PMFBP1Q8TBY8 1022 aa35.11■■■■□ 3.21
PERM1-203ENST00000479361 SOS2Q07890 1332 aaPredicted RBP35.09■■■■□ 3.21
PERM1-203ENST00000479361 LRRC59Q96AG4 307 aaKnown RBP35.08■■■■□ 3.21
PERM1-203ENST00000479361 ATAD2Q6PL18 1390 aa35.08■■■■□ 3.21
PERM1-203ENST00000479361 NGDNQ8NEJ9 315 aaKnown RBP35.07■■■■□ 3.2
PERM1-203ENST00000479361 TOPAZ1Q8N9V7 1692 aa35.06■■■■□ 3.2
PERM1-203ENST00000479361 TMF1P82094 1093 aa35.06■■■■□ 3.2
PERM1-203ENST00000479361 PSME1Q06323 249 aa35.06■■■■□ 3.2
PERM1-203ENST00000479361 JCADQ9P266 1359 aa35.05■■■■□ 3.2
PERM1-203ENST00000479361 PLEKHG3A1L390 1219 aa35.05■■■■□ 3.2
PERM1-203ENST00000479361 PUS7Q96PZ0 661 aaKnown RBP35.05■■■■□ 3.2
PERM1-203ENST00000479361 PPIP5K1Q6PFW1 1433 aa35.05■■■■□ 3.2
PERM1-203ENST00000479361 PXDNQ92626 1479 aa35.04■■■■□ 3.2
PERM1-203ENST00000479361 XPCQ01831 940 aaPredicted RBP35.03■■■■□ 3.2
PERM1-203ENST00000479361 KRT28Q7Z3Y7 464 aa35.03■■■■□ 3.2
PERM1-203ENST00000479361 HSPA5P11021 654 aaKnown RBP35.02■■■■□ 3.2
PERM1-203ENST00000479361 POLR3AO14802 1390 aaPredicted RBP35■■■■□ 3.19
PERM1-203ENST00000479361 CDCA8Q53HL2 280 aa34.99■■■■□ 3.19
PERM1-203ENST00000479361 CABP1Q9NZU7 370 aa34.99■■■■□ 3.19
PERM1-203ENST00000479361 ACEP12821 1306 aa34.99■■■■□ 3.19
PERM1-203ENST00000479361 DISP3Q9P2K9 1392 aa34.96■■■■□ 3.19
PERM1-203ENST00000479361 SBNO1A3KN83 1393 aa34.95■■■■□ 3.19
PERM1-203ENST00000479361 SHPRHQ149N8 1683 aa34.93■■■■□ 3.18
PERM1-203ENST00000479361 SPATA31A3Q5VYP0 1347 aa34.92■■■■□ 3.18
PERM1-203ENST00000479361 ZEB1P37275 1124 aaPredicted RBP34.92■■■■□ 3.18
PERM1-203ENST00000479361 PNPLA6Q8IY17 1366 aa34.91■■■■□ 3.18
PERM1-203ENST00000479361 SPATA31A6Q5VVP1 1343 aa34.91■■■■□ 3.18
PERM1-203ENST00000479361 TMC1Q8TDI8 760 aa34.9■■■■□ 3.18
PERM1-203ENST00000479361 TNS3Q68CZ2 1445 aa34.89■■■■□ 3.18
PERM1-203ENST00000479361 NINLQ9Y2I6 1382 aa34.89■■■■□ 3.18
PERM1-203ENST00000479361 ZNF692Q9BU19 519 aaPredicted RBP34.87■■■■□ 3.17
PERM1-203ENST00000479361 PAK3O75914 559 aaPredicted RBP34.86■■■■□ 3.17
PERM1-203ENST00000479361 ARHGEF10O15013 1369 aa34.86■■■■□ 3.17
PERM1-203ENST00000479361 BRD4O60885 1362 aaPredicted RBP34.86■■■■□ 3.17
PERM1-203ENST00000479361 TRPM3Q9HCF6 1732 aaPredicted RBP34.84■■■■□ 3.17
PERM1-203ENST00000479361 LMOD2Q6P5Q4 547 aa34.84■■■■□ 3.17
PERM1-203ENST00000479361 SLC12A5Q9H2X9 1139 aa34.84■■■■□ 3.17
PERM1-203ENST00000479361 USP6P35125 1406 aa34.82■■■■□ 3.17
PERM1-203ENST00000479361 TERF2IPQ9NYB0 399 aa34.82■■■■□ 3.16
PERM1-203ENST00000479361 CPSF1Q10570 1443 aaKnown RBP34.81■■■■□ 3.16
PERM1-203ENST00000479361 HDGFL2Q7Z4V5 671 aaPredicted RBP34.81■■■■□ 3.16
PERM1-203ENST00000479361 COL22A1Q8NFW1 1626 aaPredicted RBP34.8■■■■□ 3.16
PERM1-203ENST00000479361 KTN1Q86UP2 1357 aaKnown RBP34.78■■■■□ 3.16
PERM1-203ENST00000479361 NUTM2BA6NNL0 878 aaPredicted RBP34.77■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms