RNA–Protein interactions for RNA: ENST00000479295.1

PTPN18-210, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 3

Gene PTPN18, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-210	ENST00000479295	COL16A1	Q07092	1604 aa	Predicted RBP	14.08	□□□□□ -0.15
PTPN18-210	ENST00000479295	ADGRB2	O60241	1585 aa		14.08	□□□□□ -0.16
PTPN18-210	ENST00000479295	NHSL1	Q5SYE7	1610 aa		14.08	□□□□□ -0.16
PTPN18-210	ENST00000479295	FMN2	Q9NZ56	1722 aa		14.06	□□□□□ -0.16
PTPN18-210	ENST00000479295	PHLPP1	O60346	1717 aa		14.05	□□□□□ -0.16
PTPN18-210	ENST00000479295	ARHGEF28	Q8N1W1	1705 aa	Known RBP	14.05	□□□□□ -0.16
PTPN18-210	ENST00000479295	NBPF1	Q3BBV0	1214 aa		14.05	□□□□□ -0.16
PTPN18-210	ENST00000479295	PRAM1	Q96QH2	718 aa		14.05	□□□□□ -0.16
PTPN18-210	ENST00000479295	NEUROD1	Q13562	356 aa		14.04	□□□□□ -0.16
PTPN18-210	ENST00000479295	CLSPN	Q9HAW4	1339 aa		14.04	□□□□□ -0.16
PTPN18-210	ENST00000479295	TRPM1	Q7Z4N2	1603 aa		14.04	□□□□□ -0.16
PTPN18-210	ENST00000479295	TRAK1	Q9UPV9	953 aa		14.03	□□□□□ -0.16
PTPN18-210	ENST00000479295	GPRASP1	Q5JY77	1395 aa		14.03	□□□□□ -0.16
PTPN18-210	ENST00000479295	MED1	Q15648	1581 aa	Predicted RBP	14.02	□□□□□ -0.16
PTPN18-210	ENST00000479295	JCAD	Q9P266	1359 aa		14.02	□□□□□ -0.17
PTPN18-210	ENST00000479295	SOS2	Q07890	1332 aa	Predicted RBP	14.02	□□□□□ -0.17
PTPN18-210	ENST00000479295	ORAI2	Q96SN7	254 aa		14.02	□□□□□ -0.17
PTPN18-210	ENST00000479295	PCGF6	Q9BYE7	350 aa		14.02	□□□□□ -0.17
PTPN18-210	ENST00000479295	ANKAR	Q7Z5J8	1434 aa		14.01	□□□□□ -0.17
PTPN18-210	ENST00000479295	NBPF8	Q3BBV2	869 aa		14.01	□□□□□ -0.17
PTPN18-210	ENST00000479295	POGK	Q9P215	609 aa		14	□□□□□ -0.17
PTPN18-210	ENST00000479295	SHPRH	Q149N8	1683 aa		14	□□□□□ -0.17
PTPN18-210	ENST00000479295	USP32	Q8NFA0	1604 aa		14	□□□□□ -0.17
PTPN18-210	ENST00000479295	TONSL	Q96HA7	1378 aa		13.98	□□□□□ -0.17
PTPN18-210	ENST00000479295	WASL	O00401	505 aa	Predicted RBP	13.98	□□□□□ -0.17
PTPN18-210	ENST00000479295	TIMELESS	Q9UNS1	1208 aa		13.98	□□□□□ -0.17
PTPN18-210	ENST00000479295	PXDN	Q92626	1479 aa		13.98	□□□□□ -0.17
PTPN18-210	ENST00000479295	KIF1A	Q12756	1690 aa		13.98	□□□□□ -0.17
PTPN18-210	ENST00000479295	EIF3A	Q14152	1382 aa	Known RBP	13.97	□□□□□ -0.17
PTPN18-210	ENST00000479295	SPATA31A6	Q5VVP1	1343 aa		13.97	□□□□□ -0.17
PTPN18-210	ENST00000479295	TULP4	Q9NRJ4	1543 aa		13.97	□□□□□ -0.17
PTPN18-210	ENST00000479295	LRRC59	Q96AG4	307 aa	Known RBP	13.97	□□□□□ -0.17
PTPN18-210	ENST00000479295	RALGAPB	Q86X10	1494 aa		13.97	□□□□□ -0.17
PTPN18-210	ENST00000479295	NPHP3	Q7Z494	1330 aa		13.96	□□□□□ -0.17
PTPN18-210	ENST00000479295	ESCO1	Q5FWF5	840 aa		13.96	□□□□□ -0.17
PTPN18-210	ENST00000479295	PRR36	Q9H6K5	1346 aa		13.95	□□□□□ -0.18
PTPN18-210	ENST00000479295	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
PTPN18-210	ENST00000479295	DDX17	Q92841	729 aa	Known RBP	13.95	□□□□□ -0.18
PTPN18-210	ENST00000479295	PNPLA6	Q8IY17	1366 aa		13.95	□□□□□ -0.18
PTPN18-210	ENST00000479295	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.94	□□□□□ -0.18
PTPN18-210	ENST00000479295	RGPD8	O14715	1765 aa	Predicted RBP	13.94	□□□□□ -0.18
PTPN18-210	ENST00000479295	ROCK2	O75116	1388 aa	Known RBP	13.94	□□□□□ -0.18
PTPN18-210	ENST00000479295	DISP3	Q9P2K9	1392 aa		13.94	□□□□□ -0.18
PTPN18-210	ENST00000479295	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.93	□□□□□ -0.18
PTPN18-210	ENST00000479295	ATP7B	P35670	1465 aa		13.93	□□□□□ -0.18
PTPN18-210	ENST00000479295	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.93	□□□□□ -0.18
PTPN18-210	ENST00000479295	PHF8	Q9UPP1	1060 aa		13.93	□□□□□ -0.18
PTPN18-210	ENST00000479295	SBNO2	Q9Y2G9	1366 aa		13.93	□□□□□ -0.18
PTPN18-210	ENST00000479295	LRP6	O75581	1613 aa		13.93	□□□□□ -0.18
PTPN18-210	ENST00000479295	NUTM2F	A1L443	756 aa		13.92	□□□□□ -0.18
PTPN18-210	ENST00000479295	FOXO3	O43524	673 aa		13.92	□□□□□ -0.18
PTPN18-210	ENST00000479295	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN18-210	ENST00000479295	TOPAZ1	Q8N9V7	1692 aa		13.91	□□□□□ -0.18
PTPN18-210	ENST00000479295	CDK19	Q9BWU1	502 aa		13.9	□□□□□ -0.18
PTPN18-210	ENST00000479295	RGS17	Q9UGC6	210 aa	Predicted RBP	13.9	□□□□□ -0.18
PTPN18-210	ENST00000479295	SBNO1	A3KN83	1393 aa		13.9	□□□□□ -0.18
PTPN18-210	ENST00000479295	QRICH2	Q9H0J4	1663 aa		13.9	□□□□□ -0.18
PTPN18-210	ENST00000479295	NUDT16	Q96DE0	195 aa	Known RBP	13.89	□□□□□ -0.19
PTPN18-210	ENST00000479295	SPATA31A3	Q5VYP0	1347 aa		13.89	□□□□□ -0.19
PTPN18-210	ENST00000479295	POLR3A	O14802	1390 aa	Predicted RBP	13.88	□□□□□ -0.19
PTPN18-210	ENST00000479295	ITSN1	Q15811	1721 aa		13.88	□□□□□ -0.19
PTPN18-210	ENST00000479295	PLEKHG3	A1L390	1219 aa		13.88	□□□□□ -0.19
PTPN18-210	ENST00000479295	CCDC61	Q9Y6R9	512 aa		13.88	□□□□□ -0.19
PTPN18-210	ENST00000479295	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.87	□□□□□ -0.19
PTPN18-210	ENST00000479295	KRT28	Q7Z3Y7	464 aa		13.87	□□□□□ -0.19
PTPN18-210	ENST00000479295	CARD11	Q9BXL7	1154 aa		13.87	□□□□□ -0.19
PTPN18-210	ENST00000479295	TNS3	Q68CZ2	1445 aa		13.86	□□□□□ -0.19
PTPN18-210	ENST00000479295	PSME1	Q06323	249 aa		13.85	□□□□□ -0.19
PTPN18-210	ENST00000479295	ILDR2	Q71H61	639 aa		13.85	□□□□□ -0.19
PTPN18-210	ENST00000479295	XPC	Q01831	940 aa	Predicted RBP	13.84	□□□□□ -0.19
PTPN18-210	ENST00000479295	PMFBP1	Q8TBY8	1022 aa		13.84	□□□□□ -0.19
PTPN18-210	ENST00000479295	ALS2	Q96Q42	1657 aa		13.84	□□□□□ -0.19
PTPN18-210	ENST00000479295	PUS7	Q96PZ0	661 aa	Known RBP	13.83	□□□□□ -0.2
PTPN18-210	ENST00000479295	EVC2	Q86UK5	1308 aa		13.83	□□□□□ -0.2
PTPN18-210	ENST00000479295	CCER1	Q8TC90	406 aa	Predicted RBP	13.82	□□□□□ -0.2
PTPN18-210	ENST00000479295	TESK2	Q96S53	571 aa		13.82	□□□□□ -0.2
PTPN18-210	ENST00000479295	CABP2	Q9NPB3	220 aa		13.82	□□□□□ -0.2
PTPN18-210	ENST00000479295	ARHGEF10	O15013	1369 aa		13.82	□□□□□ -0.2
PTPN18-210	ENST00000479295	BRD4	O60885	1362 aa	Predicted RBP	13.82	□□□□□ -0.2
PTPN18-210	ENST00000479295	PHF23	Q9BUL5	403 aa	Predicted RBP	13.81	□□□□□ -0.2
PTPN18-210	ENST00000479295	ACE	P12821	1306 aa		13.81	□□□□□ -0.2
PTPN18-210	ENST00000479295	PPIP5K1	Q6PFW1	1433 aa		13.81	□□□□□ -0.2
PTPN18-210	ENST00000479295	SSH2	Q76I76	1423 aa		13.81	□□□□□ -0.2
PTPN18-210	ENST00000479295	SRPK2	P78362	688 aa	Known RBP	13.8	□□□□□ -0.2
PTPN18-210	ENST00000479295	POTEA	Q6S8J7	498 aa		13.8	□□□□□ -0.2
PTPN18-210	ENST00000479295	CRYBG1	Q9Y4K1	1723 aa		13.79	□□□□□ -0.2
PTPN18-210	ENST00000479295	SLC24A1	O60721	1099 aa		13.79	□□□□□ -0.2
PTPN18-210	ENST00000479295	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.79	□□□□□ -0.2
PTPN18-210	ENST00000479295	NGDN	Q8NEJ9	315 aa	Known RBP	13.79	□□□□□ -0.2
PTPN18-210	ENST00000479295	ATAD2	Q6PL18	1390 aa		13.79	□□□□□ -0.2
PTPN18-210	ENST00000479295	MARF1	Q9Y4F3	1742 aa	Known RBP	13.78	□□□□□ -0.2
PTPN18-210	ENST00000479295	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.78	□□□□□ -0.2
PTPN18-210	ENST00000479295	NUTM2E	B1AL46	878 aa	Predicted RBP	13.78	□□□□□ -0.2
PTPN18-210	ENST00000479295	ZNF772	Q68DY9	489 aa	Predicted RBP	13.78	□□□□□ -0.2
PTPN18-210	ENST00000479295	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.78	□□□□□ -0.2
PTPN18-210	ENST00000479295	ABCA3	Q99758	1704 aa		13.78	□□□□□ -0.2
PTPN18-210	ENST00000479295	ST20-MTHFS	A0A0A6YYL1	179 aa		13.77	□□□□□ -0.21
PTPN18-210	ENST00000479295	CPSF1	Q10570	1443 aa	Known RBP	13.77	□□□□□ -0.21
PTPN18-210	ENST00000479295	CABP1	Q9NZU7	370 aa		13.77	□□□□□ -0.21
PTPN18-210	ENST00000479295	USP6	P35125	1406 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms