RNA–Protein interactions for RNA: ENST00000479192.1

ZNF3-213, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-213ENST00000479192 NUTM2EB1AL46 878 aaPredicted RBP16.47■□□□□ 0.23
ZNF3-213ENST00000479192 ZNF772Q68DY9 489 aaPredicted RBP16.47■□□□□ 0.23
ZNF3-213ENST00000479192 NUTM2AQ8IVF1 878 aaPredicted RBP16.47■□□□□ 0.23
ZNF3-213ENST00000479192 DDX17Q92841 729 aaKnown RBP16.46■□□□□ 0.23
ZNF3-213ENST00000479192 LRPPRCP42704 1394 aaKnown RBP16.46■□□□□ 0.23
ZNF3-213ENST00000479192 STK26Q9P289 416 aa16.45■□□□□ 0.22
ZNF3-213ENST00000479192 PNPLA6Q8IY17 1366 aa16.45■□□□□ 0.22
ZNF3-213ENST00000479192 NRXN1Q9ULB1 1477 aa16.45■□□□□ 0.22
ZNF3-213ENST00000479192 YTHDC2Q9H6S0 1430 aaKnown RBP16.45■□□□□ 0.22
ZNF3-213ENST00000479192 ORAI2Q96SN7 254 aa16.44■□□□□ 0.22
ZNF3-213ENST00000479192 ABCC11Q96J66 1382 aa16.43■□□□□ 0.22
ZNF3-213ENST00000479192 TMEM132EQ6IEE7 984 aa16.42■□□□□ 0.22
ZNF3-213ENST00000479192 WAPLQ7Z5K2 1190 aa16.41■□□□□ 0.22
ZNF3-213ENST00000479192 SOS2Q07890 1332 aaPredicted RBP16.41■□□□□ 0.22
ZNF3-213ENST00000479192 ESCO1Q5FWF5 840 aa16.4■□□□□ 0.22
ZNF3-213ENST00000479192 AFF2P51816 1311 aa16.4■□□□□ 0.22
ZNF3-213ENST00000479192 DHX57Q6P158 1386 aaKnown RBP16.39■□□□□ 0.21
ZNF3-213ENST00000479192 C14orf93Q9H972 538 aaKnown RBP16.39■□□□□ 0.21
ZNF3-213ENST00000479192 PXDNQ92626 1479 aa16.39■□□□□ 0.21
ZNF3-213ENST00000479192 NPHP3Q7Z494 1330 aa16.39■□□□□ 0.21
ZNF3-213ENST00000479192 PLEKHH1Q9ULM0 1364 aa16.38■□□□□ 0.21
ZNF3-213ENST00000479192 DLC1Q96QB1 1528 aa16.38■□□□□ 0.21
ZNF3-213ENST00000479192 CDK12Q9NYV4 1490 aaPredicted RBP16.37■□□□□ 0.21
ZNF3-213ENST00000479192 RXRBP28702 533 aa16.37■□□□□ 0.21
ZNF3-213ENST00000479192 C8orf37Q96NL8 207 aa16.37■□□□□ 0.21
ZNF3-213ENST00000479192 ARHGEF28Q8N1W1 1705 aaKnown RBP16.36■□□□□ 0.21
ZNF3-213ENST00000479192 ADGRB2O60241 1585 aa16.36■□□□□ 0.21
ZNF3-213ENST00000479192 CFAP70Q5T0N1 1121 aa16.36■□□□□ 0.21
ZNF3-213ENST00000479192 SIRT1Q96EB6 747 aa16.36■□□□□ 0.21
ZNF3-213ENST00000479192 ITSN1Q15811 1721 aa16.36■□□□□ 0.21
ZNF3-213ENST00000479192 ABCA3Q99758 1704 aa16.36■□□□□ 0.21
ZNF3-213ENST00000479192 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.36■□□□□ 0.21
ZNF3-213ENST00000479192 USP32Q8NFA0 1604 aa16.35■□□□□ 0.21
ZNF3-213ENST00000479192 NUTM2FA1L443 756 aa16.35■□□□□ 0.21
ZNF3-213ENST00000479192 HRCP23327 699 aa16.35■□□□□ 0.21
ZNF3-213ENST00000479192 ADGRB1O14514 1584 aa16.34■□□□□ 0.21
ZNF3-213ENST00000479192 KIAA1210Q9ULL0 1709 aa16.34■□□□□ 0.21
ZNF3-213ENST00000479192 ADAMTS2O95450 1211 aa16.34■□□□□ 0.21
ZNF3-213ENST00000479192 FOXO3O43524 673 aa16.33■□□□□ 0.2
ZNF3-213ENST00000479192 NGLY1Q96IV0 654 aa16.33■□□□□ 0.2
ZNF3-213ENST00000479192 XPCQ01831 940 aaPredicted RBP16.31■□□□□ 0.2
ZNF3-213ENST00000479192 QTRT2Q9H974 415 aaKnown RBP16.31■□□□□ 0.2
ZNF3-213ENST00000479192 PLCH1Q4KWH8 1693 aa16.3■□□□□ 0.2
ZNF3-213ENST00000479192 DCAF11Q8TEB1 546 aa16.3■□□□□ 0.2
ZNF3-213ENST00000479192 PRAM1Q96QH2 718 aa16.3■□□□□ 0.2
ZNF3-213ENST00000479192 POGKQ9P215 609 aa16.3■□□□□ 0.2
ZNF3-213ENST00000479192 KDM2AQ9Y2K7 1162 aa16.3■□□□□ 0.2
ZNF3-213ENST00000479192 TRPM3Q9HCF6 1732 aaPredicted RBP16.3■□□□□ 0.2
ZNF3-213ENST00000479192 NWD2Q9ULI1 1742 aa16.29■□□□□ 0.2
ZNF3-213ENST00000479192 RBM6P78332 1123 aaKnown RBP16.29■□□□□ 0.2
ZNF3-213ENST00000479192 SAFB2Q14151 953 aaKnown RBP eCLIP16.29■□□□□ 0.2
ZNF3-213ENST00000479192 STAC3Q96MF2 364 aa16.29■□□□□ 0.2
ZNF3-213ENST00000479192 RGS12O14924 1447 aa16.28■□□□□ 0.2
ZNF3-213ENST00000479192 BRWD3Q6RI45 1802 aa16.27■□□□□ 0.2
ZNF3-213ENST00000479192 USP21Q9UK80 565 aa16.27■□□□□ 0.2
ZNF3-213ENST00000479192 ALS2Q96Q42 1657 aa16.27■□□□□ 0.19
ZNF3-213ENST00000479192 ANKARQ7Z5J8 1434 aa16.27■□□□□ 0.19
ZNF3-213ENST00000479192 PHF8Q9UPP1 1060 aa16.26■□□□□ 0.19
ZNF3-213ENST00000479192 SPATA31A3Q5VYP0 1347 aa16.25■□□□□ 0.19
ZNF3-213ENST00000479192 KRT28Q7Z3Y7 464 aa16.25■□□□□ 0.19
ZNF3-213ENST00000479192 UPF1Q92900 1129 aaKnown RBP eCLIP16.25■□□□□ 0.19
ZNF3-213ENST00000479192 TRAK1Q9UPV9 953 aa16.25■□□□□ 0.19
ZNF3-213ENST00000479192 TNS3Q68CZ2 1445 aa16.25■□□□□ 0.19
ZNF3-213ENST00000479192 EIF3AQ14152 1382 aaKnown RBP16.25■□□□□ 0.19
ZNF3-213ENST00000479192 TULP4Q9NRJ4 1543 aa16.24■□□□□ 0.19
ZNF3-213ENST00000479192 PSME1Q06323 249 aa16.24■□□□□ 0.19
ZNF3-213ENST00000479192 FNBP4Q8N3X1 1017 aaPredicted RBP16.24■□□□□ 0.19
ZNF3-213ENST00000479192 TRPC5Q9UL62 973 aaPredicted RBP16.24■□□□□ 0.19
ZNF3-213ENST00000479192 ATRNO75882 1429 aa16.24■□□□□ 0.19
ZNF3-213ENST00000479192 CRYBG1Q9Y4K1 1723 aa16.24■□□□□ 0.19
ZNF3-213ENST00000479192 TOPAZ1Q8N9V7 1692 aa16.22■□□□□ 0.19
ZNF3-213ENST00000479192 MINK1Q8N4C8 1332 aaPredicted RBP16.21■□□□□ 0.19
ZNF3-213ENST00000479192 HIRIP3Q9BW71 556 aaPredicted RBP16.21■□□□□ 0.19
ZNF3-213ENST00000479192 SBNO1A3KN83 1393 aa16.21■□□□□ 0.19
ZNF3-213ENST00000479192 BCL9LQ86UU0 1499 aa16.21■□□□□ 0.19
ZNF3-213ENST00000479192 QRICH2Q9H0J4 1663 aa16.2■□□□□ 0.18
ZNF3-213ENST00000479192 NRAPQ86VF7 1730 aa16.19■□□□□ 0.18
ZNF3-213ENST00000479192 ARHGEF10O15013 1369 aa16.19■□□□□ 0.18
ZNF3-213ENST00000479192 HAP1P54257 671 aaPredicted RBP16.19■□□□□ 0.18
ZNF3-213ENST00000479192 PMFBP1Q8TBY8 1022 aa16.19■□□□□ 0.18
ZNF3-213ENST00000479192 SLIT2O94813 1529 aa16.19■□□□□ 0.18
ZNF3-213ENST00000479192 GLI3P10071 1580 aa16.18■□□□□ 0.18
ZNF3-213ENST00000479192 COL14A1Q05707 1796 aaKnown RBP16.18■□□□□ 0.18
ZNF3-213ENST00000479192 WASLO00401 505 aaPredicted RBP16.17■□□□□ 0.18
ZNF3-213ENST00000479192 LMOD2Q6P5Q4 547 aa16.17■□□□□ 0.18
ZNF3-213ENST00000479192 PHRF1Q9P1Y6 1649 aaKnown RBP16.16■□□□□ 0.18
ZNF3-213ENST00000479192 GPRASP1Q5JY77 1395 aa16.16■□□□□ 0.18
ZNF3-213ENST00000479192 ATAD2Q6PL18 1390 aa16.16■□□□□ 0.18
ZNF3-213ENST00000479192 TRPM1Q7Z4N2 1603 aa16.16■□□□□ 0.18
ZNF3-213ENST00000479192 ATP7BP35670 1465 aa16.15■□□□□ 0.18
ZNF3-213ENST00000479192 PRR36Q9H6K5 1346 aa16.15■□□□□ 0.18
ZNF3-213ENST00000479192 PLEKHG5O94827 1062 aa16.14■□□□□ 0.17
ZNF3-213ENST00000479192 UNC5CLQ8IV45 518 aa16.14■□□□□ 0.17
ZNF3-213ENST00000479192 CABLES1Q8TDN4 633 aa16.14■□□□□ 0.17
ZNF3-213ENST00000479192 GJD4Q96KN9 370 aaPredicted RBP16.14■□□□□ 0.17
ZNF3-213ENST00000479192 RALGAPBQ86X10 1494 aa16.13■□□□□ 0.17
ZNF3-213ENST00000479192 NGDNQ8NEJ9 315 aaKnown RBP16.12■□□□□ 0.17
ZNF3-213ENST00000479192 EP400Q96L91 3159 aa16.12■□□□□ 0.17
ZNF3-213ENST00000479192 NUDT16Q96DE0 195 aaKnown RBP16.09■□□□□ 0.17
ZNF3-213ENST00000479192 PAK3O75914 559 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms