RNA–Protein interactions for RNA: ENST00000479087.3

RN7SL535P-201, Transcript of RNA, 7SL, cytoplasmic 535, pseudogene, humanhuman

BASIC

Gene RN7SL535P, Length 296 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL535P-201ENST00000479087 ADGRF5Q8IZF2 1346 aa14.06□□□□□ -0.16
RN7SL535P-201ENST00000479087 CDK12Q9NYV4 1490 aaPredicted RBP14.06□□□□□ -0.16
RN7SL535P-201ENST00000479087 RGL3Q3MIN7 710 aa14.05□□□□□ -0.16
RN7SL535P-201ENST00000479087 ESCO1Q5FWF5 840 aa14.05□□□□□ -0.16
RN7SL535P-201ENST00000479087 USP21Q9UK80 565 aa14.05□□□□□ -0.16
RN7SL535P-201ENST00000479087 TMEM132EQ6IEE7 984 aa14.04□□□□□ -0.16
RN7SL535P-201ENST00000479087 PTCH1Q13635 1447 aa14.04□□□□□ -0.16
RN7SL535P-201ENST00000479087 FOXO3O43524 673 aa14.03□□□□□ -0.16
RN7SL535P-201ENST00000479087 RPGRIP1LQ68CZ1 1315 aa14.03□□□□□ -0.16
RN7SL535P-201ENST00000479087 FNBP4Q8N3X1 1017 aaPredicted RBP14.02□□□□□ -0.17
RN7SL535P-201ENST00000479087 KIF1BO60333 1816 aa14.01□□□□□ -0.17
RN7SL535P-201ENST00000479087 PLEKHH1Q9ULM0 1364 aa14.01□□□□□ -0.17
RN7SL535P-201ENST00000479087 EP400Q96L91 3159 aa14.01□□□□□ -0.17
RN7SL535P-201ENST00000479087 TRPC5Q9UL62 973 aaPredicted RBP14□□□□□ -0.17
RN7SL535P-201ENST00000479087 IFT172Q9UG01 1749 aa13.98□□□□□ -0.17
RN7SL535P-201ENST00000479087 PLEKHG5O94827 1062 aa13.98□□□□□ -0.17
RN7SL535P-201ENST00000479087 ATRNO75882 1429 aa13.98□□□□□ -0.17
RN7SL535P-201ENST00000479087 LAMC1P11047 1609 aa13.97□□□□□ -0.17
RN7SL535P-201ENST00000479087 ANKRD30BQ9BXX2 1392 aa13.97□□□□□ -0.17
RN7SL535P-201ENST00000479087 MPHOSPH9Q99550 1183 aa13.97□□□□□ -0.17
RN7SL535P-201ENST00000479087 BCL9LQ86UU0 1499 aa13.97□□□□□ -0.17
RN7SL535P-201ENST00000479087 PRAG1Q86YV5 1406 aa13.97□□□□□ -0.17
RN7SL535P-201ENST00000479087 NPHP3Q7Z494 1330 aa13.96□□□□□ -0.17
RN7SL535P-201ENST00000479087 MYOM2P54296 1465 aa13.96□□□□□ -0.17
RN7SL535P-201ENST00000479087 PXDNQ92626 1479 aa13.96□□□□□ -0.17
RN7SL535P-201ENST00000479087 SPATA31E1Q6ZUB1 1445 aa13.96□□□□□ -0.18
RN7SL535P-201ENST00000479087 PPLO60437 1756 aa13.95□□□□□ -0.18
RN7SL535P-201ENST00000479087 DHX57Q6P158 1386 aaKnown RBP13.95□□□□□ -0.18
RN7SL535P-201ENST00000479087 CABLES1Q8TDN4 633 aa13.94□□□□□ -0.18
RN7SL535P-201ENST00000479087 GJD4Q96KN9 370 aaPredicted RBP13.94□□□□□ -0.18
RN7SL535P-201ENST00000479087 LRPPRCP42704 1394 aaKnown RBP13.94□□□□□ -0.18
RN7SL535P-201ENST00000479087 ATAD2Q6PL18 1390 aa13.94□□□□□ -0.18
RN7SL535P-201ENST00000479087 KRT28Q7Z3Y7 464 aa13.93□□□□□ -0.18
RN7SL535P-201ENST00000479087 ABCC11Q96J66 1382 aa13.93□□□□□ -0.18
RN7SL535P-201ENST00000479087 CCDC144AA2RUR9 1427 aa13.92□□□□□ -0.18
RN7SL535P-201ENST00000479087 SAFB2Q14151 953 aaKnown RBP eCLIP13.92□□□□□ -0.18
RN7SL535P-201ENST00000479087 CFAP70Q5T0N1 1121 aa13.92□□□□□ -0.18
RN7SL535P-201ENST00000479087 SPATA31A3Q5VYP0 1347 aa13.91□□□□□ -0.18
RN7SL535P-201ENST00000479087 CDC42BPGQ6DT37 1551 aa13.91□□□□□ -0.18
RN7SL535P-201ENST00000479087 COL22A1Q8NFW1 1626 aaPredicted RBP13.9□□□□□ -0.18
RN7SL535P-201ENST00000479087 UNC5CLQ8IV45 518 aa13.9□□□□□ -0.18
RN7SL535P-201ENST00000479087 TECPR2O15040 1411 aa13.9□□□□□ -0.19
RN7SL535P-201ENST00000479087 YTHDC2Q9H6S0 1430 aaKnown RBP13.89□□□□□ -0.19
RN7SL535P-201ENST00000479087 DEFB132Q7Z7B7 95 aa13.88□□□□□ -0.19
RN7SL535P-201ENST00000479087 C14orf93Q9H972 538 aaKnown RBP13.88□□□□□ -0.19
RN7SL535P-201ENST00000479087 ZRANB1Q9UGI0 708 aa13.88□□□□□ -0.19
RN7SL535P-201ENST00000479087 PHF8Q9UPP1 1060 aa13.88□□□□□ -0.19
RN7SL535P-201ENST00000479087 PIK3C2GO75747 1445 aa13.88□□□□□ -0.19
RN7SL535P-201ENST00000479087 NRXN1Q9ULB1 1477 aa13.87□□□□□ -0.19
RN7SL535P-201ENST00000479087 LMOD2Q6P5Q4 547 aa13.87□□□□□ -0.19
RN7SL535P-201ENST00000479087 PMFBP1Q8TBY8 1022 aa13.87□□□□□ -0.19
RN7SL535P-201ENST00000479087 PRAM1Q96QH2 718 aa13.87□□□□□ -0.19
RN7SL535P-201ENST00000479087 RALGAPBQ86X10 1494 aa13.87□□□□□ -0.19
RN7SL535P-201ENST00000479087 SLIT2O94813 1529 aa13.86□□□□□ -0.19
RN7SL535P-201ENST00000479087 SEPT12Q8IYM1 358 aa13.85□□□□□ -0.19
RN7SL535P-201ENST00000479087 CLSPNQ9HAW4 1339 aa13.85□□□□□ -0.19
RN7SL535P-201ENST00000479087 GLI3P10071 1580 aa13.84□□□□□ -0.19
RN7SL535P-201ENST00000479087 FAM83GA6ND36 823 aa13.84□□□□□ -0.19
RN7SL535P-201ENST00000479087 HAP1P54257 671 aaPredicted RBP13.84□□□□□ -0.19
RN7SL535P-201ENST00000479087 SIRT1Q96EB6 747 aa13.84□□□□□ -0.19
RN7SL535P-201ENST00000479087 HIRIP3Q9BW71 556 aaPredicted RBP13.84□□□□□ -0.19
RN7SL535P-201ENST00000479087 PSME1Q06323 249 aa13.83□□□□□ -0.2
RN7SL535P-201ENST00000479087 CCDC125Q86Z20 511 aa13.83□□□□□ -0.2
RN7SL535P-201ENST00000479087 PCGF6Q9BYE7 350 aa13.83□□□□□ -0.2
RN7SL535P-201ENST00000479087 CCDC9Q9Y3X0 531 aaKnown RBP13.83□□□□□ -0.2
RN7SL535P-201ENST00000479087 FMN2Q9NZ56 1722 aa13.82□□□□□ -0.2
RN7SL535P-201ENST00000479087 VPS72Q15906 364 aa13.82□□□□□ -0.2
RN7SL535P-201ENST00000479087 TRAK1Q9UPV9 953 aa13.82□□□□□ -0.2
RN7SL535P-201ENST00000479087 RGPD8O14715 1765 aaPredicted RBP13.81□□□□□ -0.2
RN7SL535P-201ENST00000479087 POGKQ9P215 609 aa13.81□□□□□ -0.2
RN7SL535P-201ENST00000479087 MARF1Q9Y4F3 1742 aaKnown RBP13.81□□□□□ -0.2
RN7SL535P-201ENST00000479087 TNS3Q68CZ2 1445 aa13.81□□□□□ -0.2
RN7SL535P-201ENST00000479087 FAM182BQ5T319 152 aa13.8□□□□□ -0.2
RN7SL535P-201ENST00000479087 KDM2AQ9Y2K7 1162 aa13.8□□□□□ -0.2
RN7SL535P-201ENST00000479087 KIAA1210Q9ULL0 1709 aa13.79□□□□□ -0.2
RN7SL535P-201ENST00000479087 ONECUT3O60422 494 aaPredicted RBP13.79□□□□□ -0.2
RN7SL535P-201ENST00000479087 MINK1Q8N4C8 1332 aaPredicted RBP13.79□□□□□ -0.2
RN7SL535P-201ENST00000479087 PRR36Q9H6K5 1346 aa13.79□□□□□ -0.2
RN7SL535P-201ENST00000479087 KNDC1Q76NI1 1749 aa13.78□□□□□ -0.2
RN7SL535P-201ENST00000479087 FAM98CQ17RN3 349 aaKnown RBP13.78□□□□□ -0.2
RN7SL535P-201ENST00000479087 SBNO1A3KN83 1393 aa13.78□□□□□ -0.2
RN7SL535P-201ENST00000479087 BLMP54132 1417 aaPredicted RBP13.78□□□□□ -0.2
RN7SL535P-201ENST00000479087 USP32Q8NFA0 1604 aa13.78□□□□□ -0.2
RN7SL535P-201ENST00000479087 BRWD3Q6RI45 1802 aa13.77□□□□□ -0.21
RN7SL535P-201ENST00000479087 KRT27Q7Z3Y8 459 aa13.77□□□□□ -0.21
RN7SL535P-201ENST00000479087 BTG4Q9NY30 223 aa13.77□□□□□ -0.21
RN7SL535P-201ENST00000479087 A0A0G2JS52 829 aa13.76□□□□□ -0.21
RN7SL535P-201ENST00000479087 PSDA5PKW4 1024 aaPredicted RBP13.76□□□□□ -0.21
RN7SL535P-201ENST00000479087 MYT1Q01538 1121 aa13.76□□□□□ -0.21
RN7SL535P-201ENST00000479087 STAC3Q96MF2 364 aa13.76□□□□□ -0.21
RN7SL535P-201ENST00000479087 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.76□□□□□ -0.21
RN7SL535P-201ENST00000479087 KIF1AQ12756 1690 aa13.75□□□□□ -0.21
RN7SL535P-201ENST00000479087 DCAF11Q8TEB1 546 aa13.75□□□□□ -0.21
RN7SL535P-201ENST00000479087 SF3B2Q13435 895 aaKnown RBP13.74□□□□□ -0.21
RN7SL535P-201ENST00000479087 ARHGEF10O15013 1369 aa13.73□□□□□ -0.21
RN7SL535P-201ENST00000479087 WASLO00401 505 aaPredicted RBP13.73□□□□□ -0.21
RN7SL535P-201ENST00000479087 PAK3O75914 559 aaPredicted RBP13.73□□□□□ -0.21
RN7SL535P-201ENST00000479087 ADGRB1O14514 1584 aa13.72□□□□□ -0.21
RN7SL535P-201ENST00000479087 NUTM2GQ5VZR2 741 aa13.72□□□□□ -0.21
RN7SL535P-201ENST00000479087 PLCH1Q4KWH8 1693 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms