RNA–Protein interactions for RNA: ENST00000479029.1

PHF1-207, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 933 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-207ENST00000479029 SOS2Q07890 1332 aaPredicted RBP24.53■■□□□ 1.52
PHF1-207ENST00000479029 PNPLA6Q8IY17 1366 aa24.53■■□□□ 1.52
PHF1-207ENST00000479029 ESCO1Q5FWF5 840 aa24.52■■□□□ 1.52
PHF1-207ENST00000479029 C14orf93Q9H972 538 aaKnown RBP24.52■■□□□ 1.52
PHF1-207ENST00000479029 IFT172Q9UG01 1749 aa24.5■■□□□ 1.51
PHF1-207ENST00000479029 AFF2P51816 1311 aa24.49■■□□□ 1.51
PHF1-207ENST00000479029 RXRBP28702 533 aa24.48■■□□□ 1.51
PHF1-207ENST00000479029 SIRT1Q96EB6 747 aa24.48■■□□□ 1.51
PHF1-207ENST00000479029 C8orf37Q96NL8 207 aa24.48■■□□□ 1.51
PHF1-207ENST00000479029 YTHDC2Q9H6S0 1430 aaKnown RBP24.48■■□□□ 1.51
PHF1-207ENST00000479029 CDC42BPGQ6DT37 1551 aa24.47■■□□□ 1.51
PHF1-207ENST00000479029 NPHP3Q7Z494 1330 aa24.47■■□□□ 1.51
PHF1-207ENST00000479029 CFAP70Q5T0N1 1121 aa24.47■■□□□ 1.51
PHF1-207ENST00000479029 PLEKHH1Q9ULM0 1364 aa24.46■■□□□ 1.51
PHF1-207ENST00000479029 HRCP23327 699 aa24.46■■□□□ 1.51
PHF1-207ENST00000479029 LAMC1P11047 1609 aa24.46■■□□□ 1.51
PHF1-207ENST00000479029 DHX57Q6P158 1386 aaKnown RBP24.45■■□□□ 1.5
PHF1-207ENST00000479029 NUTM2FA1L443 756 aa24.45■■□□□ 1.5
PHF1-207ENST00000479029 ADAMTS2O95450 1211 aa24.45■■□□□ 1.5
PHF1-207ENST00000479029 NRXN1Q9ULB1 1477 aa24.45■■□□□ 1.5
PHF1-207ENST00000479029 FOXO3O43524 673 aa24.44■■□□□ 1.5
PHF1-207ENST00000479029 NGLY1Q96IV0 654 aa24.44■■□□□ 1.5
PHF1-207ENST00000479029 MYOM2P54296 1465 aa24.44■■□□□ 1.5
PHF1-207ENST00000479029 QTRT2Q9H974 415 aaKnown RBP24.4■■□□□ 1.5
PHF1-207ENST00000479029 KNDC1Q76NI1 1749 aa24.39■■□□□ 1.5
PHF1-207ENST00000479029 XPCQ01831 940 aaPredicted RBP24.39■■□□□ 1.49
PHF1-207ENST00000479029 DCAF11Q8TEB1 546 aa24.37■■□□□ 1.49
PHF1-207ENST00000479029 PRAM1Q96QH2 718 aa24.37■■□□□ 1.49
PHF1-207ENST00000479029 KDM2AQ9Y2K7 1162 aa24.37■■□□□ 1.49
PHF1-207ENST00000479029 RBM6P78332 1123 aaKnown RBP24.36■■□□□ 1.49
PHF1-207ENST00000479029 STAC3Q96MF2 364 aa24.36■■□□□ 1.49
PHF1-207ENST00000479029 POGKQ9P215 609 aa24.36■■□□□ 1.49
PHF1-207ENST00000479029 PXDNQ92626 1479 aa24.35■■□□□ 1.49
PHF1-207ENST00000479029 SAFB2Q14151 953 aaKnown RBP eCLIP24.35■■□□□ 1.49
PHF1-207ENST00000479029 CDK12Q9NYV4 1490 aaPredicted RBP24.34■■□□□ 1.49
PHF1-207ENST00000479029 USP21Q9UK80 565 aa24.33■■□□□ 1.49
PHF1-207ENST00000479029 FNBP4Q8N3X1 1017 aaPredicted RBP24.32■■□□□ 1.48
PHF1-207ENST00000479029 PHF8Q9UPP1 1060 aa24.31■■□□□ 1.48
PHF1-207ENST00000479029 KRT28Q7Z3Y7 464 aa24.3■■□□□ 1.48
PHF1-207ENST00000479029 UPF1Q92900 1129 aaKnown RBP eCLIP24.3■■□□□ 1.48
PHF1-207ENST00000479029 TRAK1Q9UPV9 953 aa24.3■■□□□ 1.48
PHF1-207ENST00000479029 FMN2Q9NZ56 1722 aa24.3■■□□□ 1.48
PHF1-207ENST00000479029 COL22A1Q8NFW1 1626 aaPredicted RBP24.28■■□□□ 1.48
PHF1-207ENST00000479029 PSME1Q06323 249 aa24.28■■□□□ 1.48
PHF1-207ENST00000479029 TRPC5Q9UL62 973 aaPredicted RBP24.28■■□□□ 1.48
PHF1-207ENST00000479029 DLC1Q96QB1 1528 aa24.28■■□□□ 1.48
PHF1-207ENST00000479029 SPATA31A3Q5VYP0 1347 aa24.28■■□□□ 1.48
PHF1-207ENST00000479029 ADGRB1O14514 1584 aa24.25■■□□□ 1.47
PHF1-207ENST00000479029 KIF1AQ12756 1690 aa24.24■■□□□ 1.47
PHF1-207ENST00000479029 HIRIP3Q9BW71 556 aaPredicted RBP24.23■■□□□ 1.47
PHF1-207ENST00000479029 RGS12O14924 1447 aa24.23■■□□□ 1.47
PHF1-207ENST00000479029 ANKARQ7Z5J8 1434 aa24.21■■□□□ 1.47
PHF1-207ENST00000479029 MINK1Q8N4C8 1332 aaPredicted RBP24.21■■□□□ 1.47
PHF1-207ENST00000479029 PMFBP1Q8TBY8 1022 aa24.2■■□□□ 1.46
PHF1-207ENST00000479029 HAP1P54257 671 aaPredicted RBP24.19■■□□□ 1.46
PHF1-207ENST00000479029 ATRNO75882 1429 aa24.18■■□□□ 1.46
PHF1-207ENST00000479029 EIF3AQ14152 1382 aaKnown RBP24.18■■□□□ 1.46
PHF1-207ENST00000479029 LMOD2Q6P5Q4 547 aa24.18■■□□□ 1.46
PHF1-207ENST00000479029 BCL9LQ86UU0 1499 aa24.18■■□□□ 1.46
PHF1-207ENST00000479029 TNS3Q68CZ2 1445 aa24.18■■□□□ 1.46
PHF1-207ENST00000479029 SBNO1A3KN83 1393 aa24.17■■□□□ 1.46
PHF1-207ENST00000479029 WASLO00401 505 aaPredicted RBP24.17■■□□□ 1.46
PHF1-207ENST00000479029 RGPD8O14715 1765 aaPredicted RBP24.16■■□□□ 1.46
PHF1-207ENST00000479029 CABLES1Q8TDN4 633 aa24.15■■□□□ 1.46
PHF1-207ENST00000479029 ADGRB2O60241 1585 aa24.15■■□□□ 1.46
PHF1-207ENST00000479029 ARHGEF10O15013 1369 aa24.15■■□□□ 1.46
PHF1-207ENST00000479029 PLEKHG5O94827 1062 aa24.14■■□□□ 1.45
PHF1-207ENST00000479029 UNC5CLQ8IV45 518 aa24.14■■□□□ 1.45
PHF1-207ENST00000479029 GJD4Q96KN9 370 aaPredicted RBP24.14■■□□□ 1.45
PHF1-207ENST00000479029 GPRASP1Q5JY77 1395 aa24.13■■□□□ 1.45
PHF1-207ENST00000479029 PRR36Q9H6K5 1346 aa24.12■■□□□ 1.45
PHF1-207ENST00000479029 ATAD2Q6PL18 1390 aa24.11■■□□□ 1.45
PHF1-207ENST00000479029 NGDNQ8NEJ9 315 aaKnown RBP24.1■■□□□ 1.45
PHF1-207ENST00000479029 MARF1Q9Y4F3 1742 aaKnown RBP24.1■■□□□ 1.45
PHF1-207ENST00000479029 USP32Q8NFA0 1604 aa24.1■■□□□ 1.45
PHF1-207ENST00000479029 SLIT2O94813 1529 aa24.09■■□□□ 1.45
PHF1-207ENST00000479029 TULP4Q9NRJ4 1543 aa24.09■■□□□ 1.45
PHF1-207ENST00000479029 NUDT16Q96DE0 195 aaKnown RBP24.06■■□□□ 1.44
PHF1-207ENST00000479029 CDK19Q9BWU1 502 aa24.05■■□□□ 1.44
PHF1-207ENST00000479029 NBPF1Q3BBV0 1214 aa24.04■■□□□ 1.44
PHF1-207ENST00000479029 FAM83GA6ND36 823 aa24.03■■□□□ 1.44
PHF1-207ENST00000479029 PAK3O75914 559 aaPredicted RBP24.03■■□□□ 1.44
PHF1-207ENST00000479029 VPS72Q15906 364 aa24.03■■□□□ 1.44
PHF1-207ENST00000479029 RALGAPBQ86X10 1494 aa24.02■■□□□ 1.44
PHF1-207ENST00000479029 CCDC9Q9Y3X0 531 aaKnown RBP24.01■■□□□ 1.43
PHF1-207ENST00000479029 ARHGEF28Q8N1W1 1705 aaKnown RBP24.01■■□□□ 1.43
PHF1-207ENST00000479029 TNKS1BP1Q9C0C2 1729 aaKnown RBP24■■□□□ 1.43
PHF1-207ENST00000479029 CCDC61Q9Y6R9 512 aa23.99■■□□□ 1.43
PHF1-207ENST00000479029 KIAA1210Q9ULL0 1709 aa23.98■■□□□ 1.43
PHF1-207ENST00000479029 CCDC125Q86Z20 511 aa23.98■■□□□ 1.43
PHF1-207ENST00000479029 L3MBTL2Q969R5 705 aa23.98■■□□□ 1.43
PHF1-207ENST00000479029 ATP7BP35670 1465 aa23.98■■□□□ 1.43
PHF1-207ENST00000479029 TRPM3Q9HCF6 1732 aaPredicted RBP23.97■■□□□ 1.43
PHF1-207ENST00000479029 EP400Q96L91 3159 aa23.97■■□□□ 1.43
PHF1-207ENST00000479029 SEPT12Q8IYM1 358 aa23.96■■□□□ 1.43
PHF1-207ENST00000479029 GLI3P10071 1580 aa23.95■■□□□ 1.43
PHF1-207ENST00000479029 BTG4Q9NY30 223 aa23.95■■□□□ 1.42
PHF1-207ENST00000479029 CENPJQ9HC77 1338 aaPredicted RBP23.94■■□□□ 1.42
PHF1-207ENST00000479029 PLEKHG3A1L390 1219 aa23.94■■□□□ 1.42
PHF1-207ENST00000479029 ONECUT3O60422 494 aaPredicted RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms