RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 LRRC59Q96AG4 307 aaKnown RBP29.99■■■□□ 2.39
TRIM8-203ENST00000479004 LAMC1P11047 1609 aa29.99■■■□□ 2.39
TRIM8-203ENST00000479004 CDC42BPGQ6DT37 1551 aa29.98■■■□□ 2.39
TRIM8-203ENST00000479004 ORAI2Q96SN7 254 aa29.98■■■□□ 2.39
TRIM8-203ENST00000479004 CFAP70Q5T0N1 1121 aa29.97■■■□□ 2.39
TRIM8-203ENST00000479004 PLEKHH1Q9ULM0 1364 aa29.95■■■□□ 2.39
TRIM8-203ENST00000479004 SIRT1Q96EB6 747 aa29.95■■■□□ 2.39
TRIM8-203ENST00000479004 MEX3CQ5U5Q3 659 aaKnown RBP29.94■■■□□ 2.38
TRIM8-203ENST00000479004 DHX57Q6P158 1386 aaKnown RBP29.92■■■□□ 2.38
TRIM8-203ENST00000479004 SOS2Q07890 1332 aaPredicted RBP29.91■■■□□ 2.38
TRIM8-203ENST00000479004 NUTM2BA6NNL0 878 aaPredicted RBP29.9■■■□□ 2.38
TRIM8-203ENST00000479004 NUTM2EB1AL46 878 aaPredicted RBP29.9■■■□□ 2.38
TRIM8-203ENST00000479004 NUTM2AQ8IVF1 878 aaPredicted RBP29.9■■■□□ 2.38
TRIM8-203ENST00000479004 PNPLA6Q8IY17 1366 aa29.9■■■□□ 2.38
TRIM8-203ENST00000479004 ESCO1Q5FWF5 840 aa29.88■■■□□ 2.37
TRIM8-203ENST00000479004 DCAF11Q8TEB1 546 aa29.86■■■□□ 2.37
TRIM8-203ENST00000479004 STAC3Q96MF2 364 aa29.85■■■□□ 2.37
TRIM8-203ENST00000479004 KDM2AQ9Y2K7 1162 aa29.85■■■□□ 2.37
TRIM8-203ENST00000479004 FMN2Q9NZ56 1722 aa29.85■■■□□ 2.37
TRIM8-203ENST00000479004 ZNF772Q68DY9 489 aaPredicted RBP29.84■■■□□ 2.37
TRIM8-203ENST00000479004 ADGRB1O14514 1584 aa29.83■■■□□ 2.37
TRIM8-203ENST00000479004 NUTM2FA1L443 756 aa29.83■■■□□ 2.37
TRIM8-203ENST00000479004 DLC1Q96QB1 1528 aa29.81■■■□□ 2.36
TRIM8-203ENST00000479004 NPHP3Q7Z494 1330 aa29.81■■■□□ 2.36
TRIM8-203ENST00000479004 PRAM1Q96QH2 718 aa29.8■■■□□ 2.36
TRIM8-203ENST00000479004 FOXO3O43524 673 aa29.78■■■□□ 2.36
TRIM8-203ENST00000479004 PXDNQ92626 1479 aa29.77■■■□□ 2.36
TRIM8-203ENST00000479004 SAFB2Q14151 953 aaKnown RBP eCLIP29.75■■■□□ 2.35
TRIM8-203ENST00000479004 POGKQ9P215 609 aa29.75■■■□□ 2.35
TRIM8-203ENST00000479004 RGPD8O14715 1765 aaPredicted RBP29.75■■■□□ 2.35
TRIM8-203ENST00000479004 COL22A1Q8NFW1 1626 aaPredicted RBP29.74■■■□□ 2.35
TRIM8-203ENST00000479004 AFF2P51816 1311 aa29.74■■■□□ 2.35
TRIM8-203ENST00000479004 TRAK1Q9UPV9 953 aa29.74■■■□□ 2.35
TRIM8-203ENST00000479004 KIF1AQ12756 1690 aa29.73■■■□□ 2.35
TRIM8-203ENST00000479004 C8orf37Q96NL8 207 aa29.73■■■□□ 2.35
TRIM8-203ENST00000479004 XPCQ01831 940 aaPredicted RBP29.71■■■□□ 2.35
TRIM8-203ENST00000479004 ADAMTS2O95450 1211 aa29.7■■■□□ 2.35
TRIM8-203ENST00000479004 ADGRB2O60241 1585 aa29.69■■■□□ 2.34
TRIM8-203ENST00000479004 RXRBP28702 533 aa29.67■■■□□ 2.34
TRIM8-203ENST00000479004 TRIM26Q12899 539 aaPredicted RBP29.66■■■□□ 2.34
TRIM8-203ENST00000479004 PHF8Q9UPP1 1060 aa29.66■■■□□ 2.34
TRIM8-203ENST00000479004 NGLY1Q96IV0 654 aa29.65■■■□□ 2.34
TRIM8-203ENST00000479004 KRT28Q7Z3Y7 464 aa29.64■■■□□ 2.34
TRIM8-203ENST00000479004 USP32Q8NFA0 1604 aa29.63■■■□□ 2.33
TRIM8-203ENST00000479004 ANKARQ7Z5J8 1434 aa29.63■■■□□ 2.33
TRIM8-203ENST00000479004 SPATA31A3Q5VYP0 1347 aa29.62■■■□□ 2.33
TRIM8-203ENST00000479004 KIAA1210Q9ULL0 1709 aa29.62■■■□□ 2.33
TRIM8-203ENST00000479004 HIRIP3Q9BW71 556 aaPredicted RBP29.61■■■□□ 2.33
TRIM8-203ENST00000479004 QTRT2Q9H974 415 aaKnown RBP29.61■■■□□ 2.33
TRIM8-203ENST00000479004 ARHGEF28Q8N1W1 1705 aaKnown RBP29.61■■■□□ 2.33
TRIM8-203ENST00000479004 MINK1Q8N4C8 1332 aaPredicted RBP29.61■■■□□ 2.33
TRIM8-203ENST00000479004 CDK12Q9NYV4 1490 aaPredicted RBP29.6■■■□□ 2.33
TRIM8-203ENST00000479004 MARF1Q9Y4F3 1742 aaKnown RBP29.59■■■□□ 2.33
TRIM8-203ENST00000479004 FNBP4Q8N3X1 1017 aaPredicted RBP29.58■■■□□ 2.33
TRIM8-203ENST00000479004 PSME1Q06323 249 aa29.57■■■□□ 2.32
TRIM8-203ENST00000479004 WASLO00401 505 aaPredicted RBP29.56■■■□□ 2.32
TRIM8-203ENST00000479004 RBM6P78332 1123 aaKnown RBP29.56■■■□□ 2.32
TRIM8-203ENST00000479004 USP21Q9UK80 565 aa29.56■■■□□ 2.32
TRIM8-203ENST00000479004 EIF3AQ14152 1382 aaKnown RBP29.55■■■□□ 2.32
TRIM8-203ENST00000479004 PMFBP1Q8TBY8 1022 aa29.55■■■□□ 2.32
TRIM8-203ENST00000479004 TULP4Q9NRJ4 1543 aa29.55■■■□□ 2.32
TRIM8-203ENST00000479004 PRR36Q9H6K5 1346 aa29.54■■■□□ 2.32
TRIM8-203ENST00000479004 TNS3Q68CZ2 1445 aa29.54■■■□□ 2.32
TRIM8-203ENST00000479004 SBNO1A3KN83 1393 aa29.53■■■□□ 2.32
TRIM8-203ENST00000479004 NBPF1Q3BBV0 1214 aa29.51■■■□□ 2.31
TRIM8-203ENST00000479004 TRPC5Q9UL62 973 aaPredicted RBP29.51■■■□□ 2.31
TRIM8-203ENST00000479004 SIN3AQ96ST3 1273 aa29.49■■■□□ 2.31
TRIM8-203ENST00000479004 RGS12O14924 1447 aa29.48■■■□□ 2.31
TRIM8-203ENST00000479004 ATRNO75882 1429 aa29.47■■■□□ 2.31
TRIM8-203ENST00000479004 L3MBTL2Q969R5 705 aa29.47■■■□□ 2.31
TRIM8-203ENST00000479004 BCL9LQ86UU0 1499 aa29.47■■■□□ 2.31
TRIM8-203ENST00000479004 TRPM3Q9HCF6 1732 aaPredicted RBP29.45■■■□□ 2.31
TRIM8-203ENST00000479004 ARHGEF10O15013 1369 aa29.45■■■□□ 2.31
TRIM8-203ENST00000479004 UPF1Q92900 1129 aaKnown RBP eCLIP29.44■■■□□ 2.3
TRIM8-203ENST00000479004 ITSN1Q15811 1721 aa29.43■■■□□ 2.3
TRIM8-203ENST00000479004 LMOD2Q6P5Q4 547 aa29.43■■■□□ 2.3
TRIM8-203ENST00000479004 ATP7BP35670 1465 aa29.42■■■□□ 2.3
TRIM8-203ENST00000479004 GPRASP1Q5JY77 1395 aa29.42■■■□□ 2.3
TRIM8-203ENST00000479004 CABLES1Q8TDN4 633 aa29.42■■■□□ 2.3
TRIM8-203ENST00000479004 NUDT16Q96DE0 195 aaKnown RBP29.42■■■□□ 2.3
TRIM8-203ENST00000479004 CDK19Q9BWU1 502 aa29.42■■■□□ 2.3
TRIM8-203ENST00000479004 ABCA3Q99758 1704 aa29.41■■■□□ 2.3
TRIM8-203ENST00000479004 SLIT2O94813 1529 aa29.4■■■□□ 2.3
TRIM8-203ENST00000479004 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.4■■■□□ 2.3
TRIM8-203ENST00000479004 NEUROD1Q13562 356 aa29.4■■■□□ 2.3
TRIM8-203ENST00000479004 ALS2Q96Q42 1657 aa29.4■■■□□ 2.3
TRIM8-203ENST00000479004 HAP1P54257 671 aaPredicted RBP29.39■■■□□ 2.3
TRIM8-203ENST00000479004 NGDNQ8NEJ9 315 aaKnown RBP29.39■■■□□ 2.3
TRIM8-203ENST00000479004 PLEKHG5O94827 1062 aa29.37■■■□□ 2.29
TRIM8-203ENST00000479004 UNC5CLQ8IV45 518 aa29.37■■■□□ 2.29
TRIM8-203ENST00000479004 GJD4Q96KN9 370 aaPredicted RBP29.35■■■□□ 2.29
TRIM8-203ENST00000479004 CENPJQ9HC77 1338 aaPredicted RBP29.35■■■□□ 2.29
TRIM8-203ENST00000479004 TRPM1Q7Z4N2 1603 aa29.34■■■□□ 2.29
TRIM8-203ENST00000479004 TOPAZ1Q8N9V7 1692 aa29.34■■■□□ 2.29
TRIM8-203ENST00000479004 CCDC61Q9Y6R9 512 aa29.33■■■□□ 2.29
TRIM8-203ENST00000479004 NWD2Q9ULI1 1742 aa29.31■■■□□ 2.28
TRIM8-203ENST00000479004 PLCH1Q4KWH8 1693 aa29.31■■■□□ 2.28
TRIM8-203ENST00000479004 PAK3O75914 559 aaPredicted RBP29.3■■■□□ 2.28
TRIM8-203ENST00000479004 QRICH2Q9H0J4 1663 aa29.3■■■□□ 2.28
TRIM8-203ENST00000479004 POLR3AO14802 1390 aaPredicted RBP29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms