RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 PRR20BP86481 221 aa9.81□□□□□ -0.84
CDC42BPA-212ENST00000478573 PRR20AP86496 221 aa9.81□□□□□ -0.84
CDC42BPA-212ENST00000478573 GUCA2AQ02747 115 aa9.81□□□□□ -0.84
CDC42BPA-212ENST00000478573 TTLL12Q14166 644 aaPredicted RBP9.81□□□□□ -0.84
CDC42BPA-212ENST00000478573 NUTM1Q86Y26 1132 aa9.81□□□□□ -0.84
CDC42BPA-212ENST00000478573 RPIAP49247 311 aa9.8□□□□□ -0.84
CDC42BPA-212ENST00000478573 CD2BP2O95400 341 aaKnown RBP9.79□□□□□ -0.84
CDC42BPA-212ENST00000478573 ZC3H15Q8WU90 426 aaKnown RBP9.79□□□□□ -0.84
CDC42BPA-212ENST00000478573 USB1Q9BQ65 265 aaKnown RBP9.79□□□□□ -0.84
CDC42BPA-212ENST00000478573 REPIN1Q9BWE0 567 aaKnown RBP9.79□□□□□ -0.84
CDC42BPA-212ENST00000478573 BARGINQ6ZT62 677 aa9.78□□□□□ -0.84
CDC42BPA-212ENST00000478573 ZMYND10O75800 440 aa9.77□□□□□ -0.85
CDC42BPA-212ENST00000478573 DGAT1O75907 488 aa9.77□□□□□ -0.85
CDC42BPA-212ENST00000478573 PKD2L1Q9P0L9 805 aa9.77□□□□□ -0.85
CDC42BPA-212ENST00000478573 ZNF787Q6DD87 383 aa9.76□□□□□ -0.85
CDC42BPA-212ENST00000478573 CCDC24Q8N4L8 307 aa9.76□□□□□ -0.85
CDC42BPA-212ENST00000478573 SYMPKQ92797 1274 aaKnown RBP9.76□□□□□ -0.85
CDC42BPA-212ENST00000478573 SSTR3P32745 418 aaPredicted RBP9.75□□□□□ -0.85
CDC42BPA-212ENST00000478573 MMP16P51512 607 aa9.75□□□□□ -0.85
CDC42BPA-212ENST00000478573 MYT1Q01538 1121 aa9.75□□□□□ -0.85
CDC42BPA-212ENST00000478573 DXOO77932 396 aaKnown RBP9.73□□□□□ -0.85
CDC42BPA-212ENST00000478573 CYP4X1Q8N118 509 aa9.73□□□□□ -0.85
CDC42BPA-212ENST00000478573 GIGYF2Q6Y7W6 1299 aaKnown RBP9.72□□□□□ -0.85
CDC42BPA-212ENST00000478573 C6orf229H3BNL8 230 aa9.71□□□□□ -0.86
CDC42BPA-212ENST00000478573 FDX1P10109 184 aa9.71□□□□□ -0.86
CDC42BPA-212ENST00000478573 TRIM32Q13049 653 aa9.71□□□□□ -0.86
CDC42BPA-212ENST00000478573 AMHR2Q16671 573 aa9.71□□□□□ -0.86
CDC42BPA-212ENST00000478573 TTC24A2A3L6 582 aaPredicted RBP9.7□□□□□ -0.86
CDC42BPA-212ENST00000478573 ST8SIA5O15466 376 aa9.7□□□□□ -0.86
CDC42BPA-212ENST00000478573 NDUFV2P19404 249 aa9.69□□□□□ -0.86
CDC42BPA-212ENST00000478573 SPIRE2Q8WWL2 714 aa9.69□□□□□ -0.86
CDC42BPA-212ENST00000478573 JUNDP17535 347 aa9.68□□□□□ -0.86
CDC42BPA-212ENST00000478573 RETREG3Q86VR2 466 aa9.68□□□□□ -0.86
CDC42BPA-212ENST00000478573 PCDHGC3Q9UN70 934 aa9.68□□□□□ -0.86
CDC42BPA-212ENST00000478573 BEGAINQ9BUH8 593 aa9.67□□□□□ -0.86
CDC42BPA-212ENST00000478573 TOR4AQ9NXH8 423 aa9.67□□□□□ -0.86
CDC42BPA-212ENST00000478573 MOXD2PA6NHM9 499 aa9.66□□□□□ -0.86
CDC42BPA-212ENST00000478573 WNT7AO00755 349 aa9.65□□□□□ -0.86
CDC42BPA-212ENST00000478573 NUDT12Q9BQG2 462 aa9.65□□□□□ -0.86
CDC42BPA-212ENST00000478573 TRIM66O15016 1216 aa9.64□□□□□ -0.87
CDC42BPA-212ENST00000478573 PARP9Q8IXQ6 854 aa9.64□□□□□ -0.87
CDC42BPA-212ENST00000478573 MRGPRX2Q96LB1 330 aa9.64□□□□□ -0.87
CDC42BPA-212ENST00000478573 AAASQ9NRG9 546 aa9.64□□□□□ -0.87
CDC42BPA-212ENST00000478573 POTECB2RU33 542 aa9.63□□□□□ -0.87
CDC42BPA-212ENST00000478573 AK7Q96M32 723 aa9.63□□□□□ -0.87
CDC42BPA-212ENST00000478573 MS4A1P11836 297 aa9.62□□□□□ -0.87
CDC42BPA-212ENST00000478573 SNIP1Q8TAD8 396 aaKnown RBP9.62□□□□□ -0.87
CDC42BPA-212ENST00000478573 AXIN1O15169 862 aa9.61□□□□□ -0.87
CDC42BPA-212ENST00000478573 SKOR1P84550 965 aa9.61□□□□□ -0.87
CDC42BPA-212ENST00000478573 RC3H1Q5TC82 1133 aaKnown RBP9.61□□□□□ -0.87
CDC42BPA-212ENST00000478573 TBC1D2Q9BYX2 928 aa9.61□□□□□ -0.87
CDC42BPA-212ENST00000478573 MTMR2Q13614 643 aa9.6□□□□□ -0.87
CDC42BPA-212ENST00000478573 PRR7Q8TB68 274 aa9.6□□□□□ -0.87
CDC42BPA-212ENST00000478573 ZNF775Q96BV0 537 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPA-212ENST00000478573 J3QL48 77 aa9.59□□□□□ -0.87
CDC42BPA-212ENST00000478573 CCNYL3P0C7X3 344 aa9.59□□□□□ -0.87
CDC42BPA-212ENST00000478573 WNT7BP56706 349 aa9.59□□□□□ -0.87
CDC42BPA-212ENST00000478573 PTCRAQ6ISU1 281 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPA-212ENST00000478573 DACH1Q9UI36 760 aa9.59□□□□□ -0.87
CDC42BPA-212ENST00000478573 AVPP01185 164 aa9.58□□□□□ -0.88
CDC42BPA-212ENST00000478573 SMPD1P17405 629 aa9.58□□□□□ -0.88
CDC42BPA-212ENST00000478573 SLC24A3Q9HC58 644 aa9.58□□□□□ -0.88
CDC42BPA-212ENST00000478573 DIXDC1Q155Q3 683 aa9.57□□□□□ -0.88
CDC42BPA-212ENST00000478573 PTPRNQ16849 979 aa9.57□□□□□ -0.88
CDC42BPA-212ENST00000478573 RSBN1LQ6PCB5 846 aaPredicted RBP9.57□□□□□ -0.88
CDC42BPA-212ENST00000478573 CRIPAKQ8N1N5 446 aa9.57□□□□□ -0.88
CDC42BPA-212ENST00000478573 CSPP1Q1MSJ5 1256 aa9.56□□□□□ -0.88
CDC42BPA-212ENST00000478573 CTC1Q2NKJ3 1217 aa9.56□□□□□ -0.88
CDC42BPA-212ENST00000478573 EHBP1Q8NDI1 1231 aa9.56□□□□□ -0.88
CDC42BPA-212ENST00000478573 ALDH1A1P00352 501 aa9.55□□□□□ -0.88
CDC42BPA-212ENST00000478573 PDE4DQ08499 809 aa9.55□□□□□ -0.88
CDC42BPA-212ENST00000478573 LINC01559Q495D7 138 aa9.55□□□□□ -0.88
CDC42BPA-212ENST00000478573 PCDHB15Q9Y5E8 787 aa9.55□□□□□ -0.88
CDC42BPA-212ENST00000478573 SPDYE5A6NIY4 337 aa9.54□□□□□ -0.88
CDC42BPA-212ENST00000478573 UNC93B1Q9H1C4 597 aa9.54□□□□□ -0.88
CDC42BPA-212ENST00000478573 GMPR2Q9P2T1 348 aaKnown RBP9.54□□□□□ -0.88
CDC42BPA-212ENST00000478573 CTHP32929 405 aa9.53□□□□□ -0.88
CDC42BPA-212ENST00000478573 RIC3Q7Z5B4 369 aa9.53□□□□□ -0.88
CDC42BPA-212ENST00000478573 TSC1Q92574 1164 aa9.53□□□□□ -0.88
CDC42BPA-212ENST00000478573 HPS1Q92902 700 aa9.53□□□□□ -0.88
CDC42BPA-212ENST00000478573 HRCP23327 699 aa9.52□□□□□ -0.89
CDC42BPA-212ENST00000478573 SMCPP49901 116 aaPredicted RBP9.52□□□□□ -0.89
CDC42BPA-212ENST00000478573 SH3BP2P78314 561 aa9.52□□□□□ -0.89
CDC42BPA-212ENST00000478573 KCNH2Q12809 1159 aa9.52□□□□□ -0.89
CDC42BPA-212ENST00000478573 ZBTB3Q9H5J0 574 aa9.52□□□□□ -0.89
CDC42BPA-212ENST00000478573 EVA1BQ9NVM1 165 aa9.52□□□□□ -0.89
CDC42BPA-212ENST00000478573 C11orf95C9JLR9 678 aaPredicted RBP9.51□□□□□ -0.89
CDC42BPA-212ENST00000478573 CFAP99D6REC4 459 aa9.51□□□□□ -0.89
CDC42BPA-212ENST00000478573 SPTLC1O15269 473 aa9.51□□□□□ -0.89
CDC42BPA-212ENST00000478573 CABLES1Q8TDN4 633 aa9.51□□□□□ -0.89
CDC42BPA-212ENST00000478573 BAP1Q92560 729 aa9.51□□□□□ -0.89
CDC42BPA-212ENST00000478573 GJA5P36382 358 aa9.5□□□□□ -0.89
CDC42BPA-212ENST00000478573 DESI1Q6ICB0 168 aa9.5□□□□□ -0.89
CDC42BPA-212ENST00000478573 WASF2Q9Y6W5 498 aa9.5□□□□□ -0.89
CDC42BPA-212ENST00000478573 NUTM2BA6NNL0 878 aaPredicted RBP9.49□□□□□ -0.89
CDC42BPA-212ENST00000478573 NUTM2EB1AL46 878 aaPredicted RBP9.49□□□□□ -0.89
CDC42BPA-212ENST00000478573 NUTM2DQ5VT03 806 aaPredicted RBP9.49□□□□□ -0.89
CDC42BPA-212ENST00000478573 NUTM2AQ8IVF1 878 aaPredicted RBP9.49□□□□□ -0.89
CDC42BPA-212ENST00000478573 MYSM1Q5VVJ2 828 aa9.48□□□□□ -0.89
CDC42BPA-212ENST00000478573 ATP13A2Q9NQ11 1180 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms