RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 MYOM2P54296 1465 aa27.94■■■□□ 2.06
EPHB4-205ENST00000478459 SAFB2Q14151 953 aaKnown RBP eCLIP27.93■■■□□ 2.06
EPHB4-205ENST00000478459 MEX3CQ5U5Q3 659 aaKnown RBP27.93■■■□□ 2.06
EPHB4-205ENST00000478459 C14orf93Q9H972 538 aaKnown RBP27.93■■■□□ 2.06
EPHB4-205ENST00000478459 PRAG1Q86YV5 1406 aa27.92■■■□□ 2.06
EPHB4-205ENST00000478459 HRCP23327 699 aa27.92■■■□□ 2.06
EPHB4-205ENST00000478459 NRXN1Q9ULB1 1477 aa27.91■■■□□ 2.06
EPHB4-205ENST00000478459 POTEAQ6S8J7 498 aa27.91■■■□□ 2.06
EPHB4-205ENST00000478459 LAMC1P11047 1609 aa27.89■■■□□ 2.06
EPHB4-205ENST00000478459 TECPR2O15040 1411 aa27.89■■■□□ 2.06
EPHB4-205ENST00000478459 ABCC11Q96J66 1382 aa27.88■■■□□ 2.05
EPHB4-205ENST00000478459 ESCO1Q5FWF5 840 aa27.88■■■□□ 2.05
EPHB4-205ENST00000478459 CDC42BPGQ6DT37 1551 aa27.87■■■□□ 2.05
EPHB4-205ENST00000478459 SPATA31A6Q5VVP1 1343 aa27.86■■■□□ 2.05
EPHB4-205ENST00000478459 DHX57Q6P158 1386 aaKnown RBP27.86■■■□□ 2.05
EPHB4-205ENST00000478459 XPCQ01831 940 aaPredicted RBP27.85■■■□□ 2.05
EPHB4-205ENST00000478459 LRRC59Q96AG4 307 aaKnown RBP27.84■■■□□ 2.05
EPHB4-205ENST00000478459 RGPD8O14715 1765 aaPredicted RBP27.83■■■□□ 2.05
EPHB4-205ENST00000478459 PRAM1Q96QH2 718 aa27.83■■■□□ 2.05
EPHB4-205ENST00000478459 TRAK1Q9UPV9 953 aa27.82■■■□□ 2.04
EPHB4-205ENST00000478459 FMN2Q9NZ56 1722 aa27.81■■■□□ 2.04
EPHB4-205ENST00000478459 PNPLA6Q8IY17 1366 aa27.8■■■□□ 2.04
EPHB4-205ENST00000478459 POGKQ9P215 609 aa27.79■■■□□ 2.04
EPHB4-205ENST00000478459 FOXO3O43524 673 aa27.78■■■□□ 2.04
EPHB4-205ENST00000478459 ADGRB1O14514 1584 aa27.77■■■□□ 2.04
EPHB4-205ENST00000478459 ADAMTS2O95450 1211 aa27.76■■■□□ 2.03
EPHB4-205ENST00000478459 HIRIP3Q9BW71 556 aaPredicted RBP27.76■■■□□ 2.03
EPHB4-205ENST00000478459 SOS2Q07890 1332 aaPredicted RBP27.75■■■□□ 2.03
EPHB4-205ENST00000478459 C8orf37Q96NL8 207 aa27.73■■■□□ 2.03
EPHB4-205ENST00000478459 MINK1Q8N4C8 1332 aaPredicted RBP27.72■■■□□ 2.03
EPHB4-205ENST00000478459 PLEKHG5O94827 1062 aa27.72■■■□□ 2.03
EPHB4-205ENST00000478459 SIRT1Q96EB6 747 aa27.71■■■□□ 2.03
EPHB4-205ENST00000478459 AFF2P51816 1311 aa27.7■■■□□ 2.03
EPHB4-205ENST00000478459 NPHP3Q7Z494 1330 aa27.7■■■□□ 2.03
EPHB4-205ENST00000478459 SIN3AQ96ST3 1273 aa27.7■■■□□ 2.02
EPHB4-205ENST00000478459 PXDNQ92626 1479 aa27.7■■■□□ 2.02
EPHB4-205ENST00000478459 DLC1Q96QB1 1528 aa27.69■■■□□ 2.02
EPHB4-205ENST00000478459 NEUROD1Q13562 356 aa27.67■■■□□ 2.02
EPHB4-205ENST00000478459 ZNF772Q68DY9 489 aaPredicted RBP27.66■■■□□ 2.02
EPHB4-205ENST00000478459 ARHGEF28Q8N1W1 1705 aaKnown RBP27.65■■■□□ 2.02
EPHB4-205ENST00000478459 PMFBP1Q8TBY8 1022 aa27.65■■■□□ 2.02
EPHB4-205ENST00000478459 USP32Q8NFA0 1604 aa27.65■■■□□ 2.02
EPHB4-205ENST00000478459 KIF1AQ12756 1690 aa27.65■■■□□ 2.02
EPHB4-205ENST00000478459 NGLY1Q96IV0 654 aa27.63■■■□□ 2.01
EPHB4-205ENST00000478459 PHF8Q9UPP1 1060 aa27.63■■■□□ 2.01
EPHB4-205ENST00000478459 NBPF1Q3BBV0 1214 aa27.62■■■□□ 2.01
EPHB4-205ENST00000478459 KRT28Q7Z3Y7 464 aa27.62■■■□□ 2.01
EPHB4-205ENST00000478459 COL22A1Q8NFW1 1626 aaPredicted RBP27.6■■■□□ 2.01
EPHB4-205ENST00000478459 STAC3Q96MF2 364 aa27.59■■■□□ 2.01
EPHB4-205ENST00000478459 ADGRB2O60241 1585 aa27.59■■■□□ 2.01
EPHB4-205ENST00000478459 LMOD2Q6P5Q4 547 aa27.58■■■□□ 2.01
EPHB4-205ENST00000478459 L3MBTL2Q969R5 705 aa27.58■■■□□ 2.01
EPHB4-205ENST00000478459 RXRBP28702 533 aa27.56■■■□□ 2
EPHB4-205ENST00000478459 PRR36Q9H6K5 1346 aa27.56■■■□□ 2
EPHB4-205ENST00000478459 KIAA1210Q9ULL0 1709 aa27.55■■■□□ 2
EPHB4-205ENST00000478459 PSME1Q06323 249 aa27.55■■■□□ 2
EPHB4-205ENST00000478459 QTRT2Q9H974 415 aaKnown RBP27.55■■■□□ 2
EPHB4-205ENST00000478459 WASLO00401 505 aaPredicted RBP27.54■■■□□ 2
EPHB4-205ENST00000478459 SPATA31A3Q5VYP0 1347 aa27.54■■■□□ 2
EPHB4-205ENST00000478459 MARF1Q9Y4F3 1742 aaKnown RBP27.53■■■□□ 2
EPHB4-205ENST00000478459 CABLES1Q8TDN4 633 aa27.53■■■□□ 2
EPHB4-205ENST00000478459 USP21Q9UK80 565 aa27.51■■□□□ 1.99
EPHB4-205ENST00000478459 TULP4Q9NRJ4 1543 aa27.5■■□□□ 1.99
EPHB4-205ENST00000478459 ANKARQ7Z5J8 1434 aa27.5■■□□□ 1.99
EPHB4-205ENST00000478459 HAP1P54257 671 aaPredicted RBP27.49■■□□□ 1.99
EPHB4-205ENST00000478459 TNS3Q68CZ2 1445 aa27.49■■□□□ 1.99
EPHB4-205ENST00000478459 CDK19Q9BWU1 502 aa27.47■■□□□ 1.99
EPHB4-205ENST00000478459 TRIM26Q12899 539 aaPredicted RBP27.46■■□□□ 1.99
EPHB4-205ENST00000478459 NGDNQ8NEJ9 315 aaKnown RBP27.44■■□□□ 1.98
EPHB4-205ENST00000478459 NUDT16Q96DE0 195 aaKnown RBP27.44■■□□□ 1.98
EPHB4-205ENST00000478459 TRPM3Q9HCF6 1732 aaPredicted RBP27.44■■□□□ 1.98
EPHB4-205ENST00000478459 TRPM1Q7Z4N2 1603 aa27.43■■□□□ 1.98
EPHB4-205ENST00000478459 ITSN1Q15811 1721 aa27.43■■□□□ 1.98
EPHB4-205ENST00000478459 EIF3AQ14152 1382 aaKnown RBP27.43■■□□□ 1.98
EPHB4-205ENST00000478459 ABCA3Q99758 1704 aa27.42■■□□□ 1.98
EPHB4-205ENST00000478459 PAK3O75914 559 aaPredicted RBP27.42■■□□□ 1.98
EPHB4-205ENST00000478459 RBM6P78332 1123 aaKnown RBP27.42■■□□□ 1.98
EPHB4-205ENST00000478459 ATP7BP35670 1465 aa27.42■■□□□ 1.98
EPHB4-205ENST00000478459 QRICH2Q9H0J4 1663 aa27.42■■□□□ 1.98
EPHB4-205ENST00000478459 RGS12O14924 1447 aa27.41■■□□□ 1.98
EPHB4-205ENST00000478459 FNBP4Q8N3X1 1017 aaPredicted RBP27.41■■□□□ 1.98
EPHB4-205ENST00000478459 GPRASP1Q5JY77 1395 aa27.4■■□□□ 1.98
EPHB4-205ENST00000478459 SBNO1A3KN83 1393 aa27.39■■□□□ 1.98
EPHB4-205ENST00000478459 CENPJQ9HC77 1338 aaPredicted RBP27.39■■□□□ 1.97
EPHB4-205ENST00000478459 TRPC5Q9UL62 973 aaPredicted RBP27.38■■□□□ 1.97
EPHB4-205ENST00000478459 BCL9LQ86UU0 1499 aa27.37■■□□□ 1.97
EPHB4-205ENST00000478459 ALS2Q96Q42 1657 aa27.36■■□□□ 1.97
EPHB4-205ENST00000478459 SRPK2P78362 688 aaKnown RBP27.36■■□□□ 1.97
EPHB4-205ENST00000478459 NBPF8Q3BBV2 869 aa27.36■■□□□ 1.97
EPHB4-205ENST00000478459 CABP2Q9NPB3 220 aa27.36■■□□□ 1.97
EPHB4-205ENST00000478459 TOPAZ1Q8N9V7 1692 aa27.35■■□□□ 1.97
EPHB4-205ENST00000478459 ARHGEF10O15013 1369 aa27.35■■□□□ 1.97
EPHB4-205ENST00000478459 ROCK2O75116 1388 aaKnown RBP27.35■■□□□ 1.97
EPHB4-205ENST00000478459 ATRNO75882 1429 aa27.34■■□□□ 1.97
EPHB4-205ENST00000478459 PLCH1Q4KWH8 1693 aa27.34■■□□□ 1.97
EPHB4-205ENST00000478459 NUTM2GQ5VZR2 741 aa27.34■■□□□ 1.97
EPHB4-205ENST00000478459 CDK12Q9NYV4 1490 aaPredicted RBP27.33■■□□□ 1.97
EPHB4-205ENST00000478459 UPF1Q92900 1129 aaKnown RBP eCLIP27.32■■□□□ 1.96
EPHB4-205ENST00000478459 ACEP12821 1306 aa27.31■■□□□ 1.96
EPHB4-205ENST00000478459 SLIT2O94813 1529 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms