RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 BLOC1S3Q6QNY0 202 aa8.51□□□□□ -1.05
GPNMB-210ENST00000478451 CD46P15529 392 aa8.49□□□□□ -1.05
GPNMB-210ENST00000478451 GCGRP47871 477 aa8.49□□□□□ -1.05
GPNMB-210ENST00000478451 AMHR2Q16671 573 aa8.49□□□□□ -1.05
GPNMB-210ENST00000478451 AK7Q96M32 723 aa8.49□□□□□ -1.05
GPNMB-210ENST00000478451 TTLL12Q14166 644 aaPredicted RBP8.48□□□□□ -1.05
GPNMB-210ENST00000478451 FAM217BQ9NTX9 383 aaPredicted RBP8.48□□□□□ -1.05
GPNMB-210ENST00000478451 TRIM66O15016 1216 aa8.47□□□□□ -1.05
GPNMB-210ENST00000478451 FUT2Q10981 343 aa8.47□□□□□ -1.05
GPNMB-210ENST00000478451 PUS10Q3MIT2 529 aaKnown RBP8.47□□□□□ -1.05
GPNMB-210ENST00000478451 REPIN1Q9BWE0 567 aaKnown RBP8.47□□□□□ -1.05
GPNMB-210ENST00000478451 SLC24A3Q9HC58 644 aa8.47□□□□□ -1.05
GPNMB-210ENST00000478451 PKD2L1Q9P0L9 805 aa8.47□□□□□ -1.05
GPNMB-210ENST00000478451 TLL1O43897 1013 aa8.46□□□□□ -1.06
GPNMB-210ENST00000478451 NR1I2O75469 434 aa8.45□□□□□ -1.06
GPNMB-210ENST00000478451 PPEF1O14829 653 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-210ENST00000478451 S1PR4O95977 384 aa8.44□□□□□ -1.06
GPNMB-210ENST00000478451 ATP6V1AP38606 617 aa8.44□□□□□ -1.06
GPNMB-210ENST00000478451 MORN1Q5T089 497 aa8.44□□□□□ -1.06
GPNMB-210ENST00000478451 GIGYF2Q6Y7W6 1299 aaKnown RBP8.44□□□□□ -1.06
GPNMB-210ENST00000478451 PARP9Q8IXQ6 854 aa8.44□□□□□ -1.06
GPNMB-210ENST00000478451 TOR4AQ9NXH8 423 aa8.44□□□□□ -1.06
GPNMB-210ENST00000478451 KDM4AO75164 1064 aa8.43□□□□□ -1.06
GPNMB-210ENST00000478451 ZSCAN1Q8NBB4 408 aa8.43□□□□□ -1.06
GPNMB-210ENST00000478451 SSTR3P32745 418 aaPredicted RBP8.42□□□□□ -1.06
GPNMB-210ENST00000478451 ADH1BP00325 375 aa8.41□□□□□ -1.06
GPNMB-210ENST00000478451 LORP23490 312 aaPredicted RBP8.41□□□□□ -1.06
GPNMB-210ENST00000478451 PDE4DQ08499 809 aa8.41□□□□□ -1.06
GPNMB-210ENST00000478451 GRIPAP1Q4V328 841 aa8.41□□□□□ -1.06
GPNMB-210ENST00000478451 SCUBE3Q8IX30 993 aa8.41□□□□□ -1.06
GPNMB-210ENST00000478451 SENP2Q9HC62 589 aa8.41□□□□□ -1.06
GPNMB-210ENST00000478451 USP46P62068 366 aa8.4□□□□□ -1.06
GPNMB-210ENST00000478451 FOXC1Q12948 553 aa8.4□□□□□ -1.06
GPNMB-210ENST00000478451 TRIM47Q96LD4 638 aa8.4□□□□□ -1.06
GPNMB-210ENST00000478451 SLC27A5Q9Y2P5 690 aa8.4□□□□□ -1.06
GPNMB-210ENST00000478451 HOXA2O43364 376 aa8.38□□□□□ -1.07
GPNMB-210ENST00000478451 PLA2G2CQ5R387 149 aa8.38□□□□□ -1.07
GPNMB-210ENST00000478451 NUTM1Q86Y26 1132 aa8.38□□□□□ -1.07
GPNMB-210ENST00000478451 CYP4X1Q8N118 509 aa8.38□□□□□ -1.07
GPNMB-210ENST00000478451 SLC16A10Q8TF71 515 aa8.38□□□□□ -1.07
GPNMB-210ENST00000478451 FMNL1O95466 1100 aaPredicted RBP8.37□□□□□ -1.07
GPNMB-210ENST00000478451 MS4A1P11836 297 aa8.37□□□□□ -1.07
GPNMB-210ENST00000478451 SNRPBP14678 240 aaKnown RBP8.37□□□□□ -1.07
GPNMB-210ENST00000478451 RPIAP49247 311 aa8.37□□□□□ -1.07
GPNMB-210ENST00000478451 HLA-CQ95604 372 aa8.37□□□□□ -1.07
GPNMB-210ENST00000478451 THAP11Q96EK4 314 aa8.37□□□□□ -1.07
GPNMB-210ENST00000478451 SPSB2Q99619 263 aa8.37□□□□□ -1.07
GPNMB-210ENST00000478451 ATP13A2Q9NQ11 1180 aa8.37□□□□□ -1.07
GPNMB-210ENST00000478451 BEGAINQ9BUH8 593 aa8.36□□□□□ -1.07
GPNMB-210ENST00000478451 SALL2Q9Y467 1007 aaPredicted RBP8.36□□□□□ -1.07
GPNMB-210ENST00000478451 GUCA2AQ02747 115 aa8.35□□□□□ -1.07
GPNMB-210ENST00000478451 Q3C1V9 767 aa8.35□□□□□ -1.07
GPNMB-210ENST00000478451 RNF19BQ6ZMZ0 732 aa8.35□□□□□ -1.07
GPNMB-210ENST00000478451 SPIRE2Q8WWL2 714 aa8.35□□□□□ -1.07
GPNMB-210ENST00000478451 KIFC2Q96AC6 838 aa8.35□□□□□ -1.07
GPNMB-210ENST00000478451 SLC6A16Q9GZN6 736 aa8.35□□□□□ -1.07
GPNMB-210ENST00000478451 BRICD5Q6PL45 260 aa8.34□□□□□ -1.07
GPNMB-210ENST00000478451 NPAS3Q8IXF0 933 aa8.33□□□□□ -1.08
GPNMB-210ENST00000478451 GMPRP36959 345 aa8.32□□□□□ -1.08
GPNMB-210ENST00000478451 CD2BP2O95400 341 aaKnown RBP8.31□□□□□ -1.08
GPNMB-210ENST00000478451 FDX1P10109 184 aa8.31□□□□□ -1.08
GPNMB-210ENST00000478451 PRKCSHP14314 528 aaPredicted RBP8.31□□□□□ -1.08
GPNMB-210ENST00000478451 MSS51Q4VC12 460 aa8.31□□□□□ -1.08
GPNMB-210ENST00000478451 FAM160A2Q8N612 972 aaPredicted RBP8.31□□□□□ -1.08
GPNMB-210ENST00000478451 TBC1D2Q9BYX2 928 aa8.31□□□□□ -1.08
GPNMB-210ENST00000478451 PRDM9Q9NQV7 894 aa8.31□□□□□ -1.08
GPNMB-210ENST00000478451 MOXD2PA6NHM9 499 aa8.3□□□□□ -1.08
GPNMB-210ENST00000478451 DIXDC1Q155Q3 683 aa8.3□□□□□ -1.08
GPNMB-210ENST00000478451 TPRNQ4KMQ1 711 aa8.3□□□□□ -1.08
GPNMB-210ENST00000478451 IRF7Q92985 503 aa8.3□□□□□ -1.08
GPNMB-210ENST00000478451 NDUFV2P19404 249 aa8.29□□□□□ -1.08
GPNMB-210ENST00000478451 USB1Q9BQ65 265 aaKnown RBP8.29□□□□□ -1.08
GPNMB-210ENST00000478451 GPBP1L1Q9HC44 474 aaPredicted RBP8.29□□□□□ -1.08
GPNMB-210ENST00000478451 NXF1Q9UBU9 619 aaKnown RBP8.29□□□□□ -1.08
GPNMB-210ENST00000478451 KCNMA1Q12791 1236 aa8.28□□□□□ -1.08
GPNMB-210ENST00000478451 PCDHGC3Q9UN70 934 aa8.28□□□□□ -1.08
GPNMB-210ENST00000478451 SYMPKQ92797 1274 aaKnown RBP8.27□□□□□ -1.09
GPNMB-210ENST00000478451 KDM4CQ9H3R0 1056 aa8.27□□□□□ -1.09
GPNMB-210ENST00000478451 TTC24A2A3L6 582 aaPredicted RBP8.26□□□□□ -1.09
GPNMB-210ENST00000478451 C6orf229H3BNL8 230 aa8.26□□□□□ -1.09
GPNMB-210ENST00000478451 RSBN1LQ6PCB5 846 aaPredicted RBP8.26□□□□□ -1.09
GPNMB-210ENST00000478451 FCF1Q9Y324 198 aaKnown RBP8.26□□□□□ -1.09
GPNMB-210ENST00000478451 GJA5P36382 358 aa8.25□□□□□ -1.09
GPNMB-210ENST00000478451 RETREG3Q86VR2 466 aa8.25□□□□□ -1.09
GPNMB-210ENST00000478451 SPTLC1O15269 473 aa8.24□□□□□ -1.09
GPNMB-210ENST00000478451 DXOO77932 396 aaKnown RBP8.24□□□□□ -1.09
GPNMB-210ENST00000478451 MMP16P51512 607 aa8.24□□□□□ -1.09
GPNMB-210ENST00000478451 MYSM1Q5VVJ2 828 aa8.24□□□□□ -1.09
GPNMB-210ENST00000478451 KCTD17Q8N5Z5 321 aa8.24□□□□□ -1.09
GPNMB-210ENST00000478451 SMPD1P17405 629 aa8.23□□□□□ -1.09
GPNMB-210ENST00000478451 JUNDP17535 347 aa8.23□□□□□ -1.09
GPNMB-210ENST00000478451 MTMR2Q13614 643 aa8.23□□□□□ -1.09
GPNMB-210ENST00000478451 RIC3Q7Z5B4 369 aa8.23□□□□□ -1.09
GPNMB-210ENST00000478451 SNIP1Q8TAD8 396 aaKnown RBP8.21□□□□□ -1.1
GPNMB-210ENST00000478451 DDRGK1Q96HY6 314 aa8.21□□□□□ -1.1
GPNMB-210ENST00000478451 FAM117AQ9C073 453 aa8.21□□□□□ -1.1
GPNMB-210ENST00000478451 LIMD1Q9UGP4 676 aa8.21□□□□□ -1.1
GPNMB-210ENST00000478451 PCDHB15Q9Y5E8 787 aa8.21□□□□□ -1.1
GPNMB-210ENST00000478451 SPDYE5A6NIY4 337 aa8.2□□□□□ -1.1
GPNMB-210ENST00000478451 CLK2P49760 499 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms