RNA–Protein interactions for RNA: ENST00000478336.5

ARF1-208, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 930 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-208ENST00000478336 ARHGEF28Q8N1W1 1705 aaKnown RBP34.5■■■■□ 3.11
ARF1-208ENST00000478336 PRAM1Q96QH2 718 aa34.5■■■■□ 3.11
ARF1-208ENST00000478336 TRAK1Q9UPV9 953 aa34.5■■■■□ 3.11
ARF1-208ENST00000478336 TRPM1Q7Z4N2 1603 aa34.5■■■■□ 3.11
ARF1-208ENST00000478336 NBPF1Q3BBV0 1214 aa34.48■■■■□ 3.11
ARF1-208ENST00000478336 CLSPNQ9HAW4 1339 aa34.47■■■■□ 3.11
ARF1-208ENST00000478336 C1orf167Q5SNV9 1468 aa34.46■■■■□ 3.11
ARF1-208ENST00000478336 BRINP3Q76B58 766 aa34.44■■■■□ 3.1
ARF1-208ENST00000478336 POGKQ9P215 609 aa34.43■■■■□ 3.1
ARF1-208ENST00000478336 ADGRB2O60241 1585 aa34.43■■■■□ 3.1
ARF1-208ENST00000478336 AHDC1Q5TGY3 1603 aaPredicted RBP34.43■■■■□ 3.1
ARF1-208ENST00000478336 FMN2Q9NZ56 1722 aa34.42■■■■□ 3.1
ARF1-208ENST00000478336 SAFB2Q14151 953 aaKnown RBP eCLIP34.41■■■■□ 3.1
ARF1-208ENST00000478336 PHLPP1O60346 1717 aa34.41■■■■□ 3.1
ARF1-208ENST00000478336 NBPF8Q3BBV2 869 aa34.4■■■■□ 3.1
ARF1-208ENST00000478336 COL16A1Q07092 1604 aaPredicted RBP34.37■■■■□ 3.09
ARF1-208ENST00000478336 NHSL1Q5SYE7 1610 aa34.37■■■■□ 3.09
ARF1-208ENST00000478336 ROCK2O75116 1388 aaKnown RBP34.34■■■■□ 3.09
ARF1-208ENST00000478336 GPRASP1Q5JY77 1395 aa34.33■■■■□ 3.09
ARF1-208ENST00000478336 RALGAPBQ86X10 1494 aa34.32■■■■□ 3.08
ARF1-208ENST00000478336 ORAI2Q96SN7 254 aa34.31■■■■□ 3.08
ARF1-208ENST00000478336 MINK1Q8N4C8 1332 aaPredicted RBP34.3■■■■□ 3.08
ARF1-208ENST00000478336 CCER1Q8TC90 406 aaPredicted RBP34.29■■■■□ 3.08
ARF1-208ENST00000478336 NUTM2FA1L443 756 aa34.27■■■■□ 3.08
ARF1-208ENST00000478336 HIRIP3Q9BW71 556 aaPredicted RBP34.27■■■■□ 3.08
ARF1-208ENST00000478336 USP32Q8NFA0 1604 aa34.26■■■■□ 3.07
ARF1-208ENST00000478336 RGPD8O14715 1765 aaPredicted RBP34.25■■■■□ 3.07
ARF1-208ENST00000478336 ANKARQ7Z5J8 1434 aa34.24■■■■□ 3.07
ARF1-208ENST00000478336 ESCO1Q5FWF5 840 aa34.24■■■■□ 3.07
ARF1-208ENST00000478336 TIMELESSQ9UNS1 1208 aa34.24■■■■□ 3.07
ARF1-208ENST00000478336 CENPJQ9HC77 1338 aaPredicted RBP34.23■■■■□ 3.07
ARF1-208ENST00000478336 KIF1AQ12756 1690 aa34.22■■■■□ 3.07
ARF1-208ENST00000478336 QRICH2Q9H0J4 1663 aa34.22■■■■□ 3.07
ARF1-208ENST00000478336 TULP4Q9NRJ4 1543 aa34.22■■■■□ 3.07
ARF1-208ENST00000478336 WASLO00401 505 aaPredicted RBP34.22■■■■□ 3.07
ARF1-208ENST00000478336 DDX17Q92841 729 aaKnown RBP34.22■■■■□ 3.07
ARF1-208ENST00000478336 EIF3AQ14152 1382 aaKnown RBP34.21■■■■□ 3.07
ARF1-208ENST00000478336 JCADQ9P266 1359 aa34.21■■■■□ 3.07
ARF1-208ENST00000478336 MED1Q15648 1581 aaPredicted RBP34.19■■■■□ 3.06
ARF1-208ENST00000478336 SHPRHQ149N8 1683 aa34.17■■■■□ 3.06
ARF1-208ENST00000478336 SOS2Q07890 1332 aaPredicted RBP34.16■■■■□ 3.06
ARF1-208ENST00000478336 PRR36Q9H6K5 1346 aa34.16■■■■□ 3.06
ARF1-208ENST00000478336 CARD11Q9BXL7 1154 aa34.15■■■■□ 3.06
ARF1-208ENST00000478336 NPHP3Q7Z494 1330 aa34.14■■■■□ 3.06
ARF1-208ENST00000478336 ATP7BP35670 1465 aa34.14■■■■□ 3.06
ARF1-208ENST00000478336 PXDNQ92626 1479 aa34.14■■■■□ 3.06
ARF1-208ENST00000478336 FOXO3O43524 673 aa34.11■■■■□ 3.05
ARF1-208ENST00000478336 PHF8Q9UPP1 1060 aa34.11■■■■□ 3.05
ARF1-208ENST00000478336 LRRC59Q96AG4 307 aaKnown RBP34.1■■■■□ 3.05
ARF1-208ENST00000478336 CDK19Q9BWU1 502 aa34.09■■■■□ 3.05
ARF1-208ENST00000478336 ITSN1Q15811 1721 aa34.09■■■■□ 3.05
ARF1-208ENST00000478336 TOPAZ1Q8N9V7 1692 aa34.07■■■■□ 3.04
ARF1-208ENST00000478336 PNPLA6Q8IY17 1366 aa34.05■■■■□ 3.04
ARF1-208ENST00000478336 SPATA31A6Q5VVP1 1343 aa34.04■■■■□ 3.04
ARF1-208ENST00000478336 NUDT16Q96DE0 195 aaKnown RBP34.04■■■■□ 3.04
ARF1-208ENST00000478336 SBNO2Q9Y2G9 1366 aa34.03■■■■□ 3.04
ARF1-208ENST00000478336 DISP3Q9P2K9 1392 aa34.02■■■■□ 3.04
ARF1-208ENST00000478336 XPCQ01831 940 aaPredicted RBP34.02■■■■□ 3.04
ARF1-208ENST00000478336 PMFBP1Q8TBY8 1022 aa34.01■■■■□ 3.03
ARF1-208ENST00000478336 LRP6O75581 1613 aa34■■■■□ 3.03
ARF1-208ENST00000478336 COL22A1Q8NFW1 1626 aaPredicted RBP33.97■■■■□ 3.03
ARF1-208ENST00000478336 SRPK2P78362 688 aaKnown RBP33.97■■■■□ 3.03
ARF1-208ENST00000478336 KRT28Q7Z3Y7 464 aa33.97■■■■□ 3.03
ARF1-208ENST00000478336 CCDC61Q9Y6R9 512 aa33.97■■■■□ 3.03
ARF1-208ENST00000478336 EVC2Q86UK5 1308 aa33.97■■■■□ 3.03
ARF1-208ENST00000478336 CABP2Q9NPB3 220 aa33.96■■■■□ 3.03
ARF1-208ENST00000478336 TRPM3Q9HCF6 1732 aaPredicted RBP33.93■■■■□ 3.02
ARF1-208ENST00000478336 SPATA31A3Q5VYP0 1347 aa33.93■■■■□ 3.02
ARF1-208ENST00000478336 SBNO1A3KN83 1393 aa33.93■■■■□ 3.02
ARF1-208ENST00000478336 TNS3Q68CZ2 1445 aa33.91■■■■□ 3.02
ARF1-208ENST00000478336 PSME1Q06323 249 aa33.91■■■■□ 3.02
ARF1-208ENST00000478336 PPIP5K1Q6PFW1 1433 aa33.9■■■■□ 3.02
ARF1-208ENST00000478336 POLR3AO14802 1390 aaPredicted RBP33.9■■■■□ 3.02
ARF1-208ENST00000478336 USP47Q96K76 1375 aa33.9■■■■□ 3.02
ARF1-208ENST00000478336 PLEKHG3A1L390 1219 aa33.9■■■■□ 3.02
ARF1-208ENST00000478336 NGDNQ8NEJ9 315 aaKnown RBP33.9■■■■□ 3.02
ARF1-208ENST00000478336 ST20-MTHFSA0A0A6YYL1 179 aa33.87■■■■□ 3.01
ARF1-208ENST00000478336 NUTM2BA6NNL0 878 aaPredicted RBP33.86■■■■□ 3.01
ARF1-208ENST00000478336 NUTM2EB1AL46 878 aaPredicted RBP33.86■■■■□ 3.01
ARF1-208ENST00000478336 NUTM2AQ8IVF1 878 aaPredicted RBP33.86■■■■□ 3.01
ARF1-208ENST00000478336 TESK2Q96S53 571 aa33.86■■■■□ 3.01
ARF1-208ENST00000478336 PHF23Q9BUL5 403 aaPredicted RBP33.85■■■■□ 3.01
ARF1-208ENST00000478336 ACEP12821 1306 aa33.84■■■■□ 3.01
ARF1-208ENST00000478336 ALS2Q96Q42 1657 aa33.84■■■■□ 3.01
ARF1-208ENST00000478336 ATAD2Q6PL18 1390 aa33.82■■■■□ 3
ARF1-208ENST00000478336 ARHGEF10O15013 1369 aa33.81■■■■□ 3
ARF1-208ENST00000478336 MEX3CQ5U5Q3 659 aaKnown RBP33.79■■■■□ 3
ARF1-208ENST00000478336 CABP1Q9NZU7 370 aa33.79■■■■□ 3
ARF1-208ENST00000478336 RGS17Q9UGC6 210 aaPredicted RBP33.79■■■■□ 3
ARF1-208ENST00000478336 ABCA3Q99758 1704 aa33.76■■■□□ 2.99
ARF1-208ENST00000478336 SLC24A1O60721 1099 aa33.75■■■□□ 2.99
ARF1-208ENST00000478336 PUS7Q96PZ0 661 aaKnown RBP33.74■■■□□ 2.99
ARF1-208ENST00000478336 LMOD2Q6P5Q4 547 aa33.73■■■□□ 2.99
ARF1-208ENST00000478336 MARF1Q9Y4F3 1742 aaKnown RBP33.73■■■□□ 2.99
ARF1-208ENST00000478336 AKAP12Q02952 1782 aa33.72■■■□□ 2.99
ARF1-208ENST00000478336 USP6P35125 1406 aa33.71■■■□□ 2.99
ARF1-208ENST00000478336 ADAMTS2O95450 1211 aa33.71■■■□□ 2.99
ARF1-208ENST00000478336 PAK3O75914 559 aaPredicted RBP33.7■■■□□ 2.99
ARF1-208ENST00000478336 BRD4O60885 1362 aaPredicted RBP33.7■■■□□ 2.98
ARF1-208ENST00000478336 CRYBG1Q9Y4K1 1723 aa33.7■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms