RNA–Protein interactions for RNA: ENST00000478285.1

TDP2-203, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 2

Gene TDP2, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-203ENST00000478285 SLC6A16Q9GZN6 736 aa12.16□□□□□ -0.46
TDP2-203ENST00000478285 RNF223E7ERA6 249 aa12.15□□□□□ -0.46
TDP2-203ENST00000478285 Q3C1V9 767 aa12.15□□□□□ -0.46
TDP2-203ENST00000478285 RNF19BQ6ZMZ0 732 aa12.15□□□□□ -0.46
TDP2-203ENST00000478285 SPIRE2Q8WWL2 714 aa12.14□□□□□ -0.47
TDP2-203ENST00000478285 ATAD2BQ9ULI0 1458 aa12.14□□□□□ -0.47
TDP2-203ENST00000478285 PEG3Q9GZU2 1588 aa12.13□□□□□ -0.47
TDP2-203ENST00000478285 RSF1Q96T23 1441 aaPredicted RBP12.12□□□□□ -0.47
TDP2-203ENST00000478285 GUCA2AQ02747 115 aa12.12□□□□□ -0.47
TDP2-203ENST00000478285 BAZ1BQ9UIG0 1483 aaKnown RBP12.12□□□□□ -0.47
TDP2-203ENST00000478285 PPEF1O14829 653 aaPredicted RBP12.11□□□□□ -0.47
TDP2-203ENST00000478285 FAM160A2Q8N612 972 aaPredicted RBP12.11□□□□□ -0.47
TDP2-203ENST00000478285 ANKLE1Q8NAG6 615 aa12.11□□□□□ -0.47
TDP2-203ENST00000478285 PRKD2Q9BZL6 878 aa12.11□□□□□ -0.47
TDP2-203ENST00000478285 HMGXB3Q12766 1538 aa12.11□□□□□ -0.47
TDP2-203ENST00000478285 MSS51Q4VC12 460 aa12.1□□□□□ -0.47
TDP2-203ENST00000478285 FDX1P10109 184 aa12.08□□□□□ -0.48
TDP2-203ENST00000478285 TBC1D2Q9BYX2 928 aa12.08□□□□□ -0.48
TDP2-203ENST00000478285 PRDM9Q9NQV7 894 aa12.08□□□□□ -0.48
TDP2-203ENST00000478285 V9GY48 417 aaPredicted RBP12.08□□□□□ -0.48
TDP2-203ENST00000478285 MOXD2PA6NHM9 499 aa12.07□□□□□ -0.48
TDP2-203ENST00000478285 DIXDC1Q155Q3 683 aa12.07□□□□□ -0.48
TDP2-203ENST00000478285 USB1Q9BQ65 265 aaKnown RBP12.07□□□□□ -0.48
TDP2-203ENST00000478285 NDUFV2P19404 249 aa12.06□□□□□ -0.48
TDP2-203ENST00000478285 PCDHGC3Q9UN70 934 aa12.05□□□□□ -0.48
TDP2-203ENST00000478285 TOP2AP11388 1531 aaKnown RBP12.05□□□□□ -0.48
TDP2-203ENST00000478285 NCAPD3P42695 1498 aa12.04□□□□□ -0.48
TDP2-203ENST00000478285 SUPT5HO00267 1087 aaKnown RBP12.04□□□□□ -0.48
TDP2-203ENST00000478285 SYMPKQ92797 1274 aaKnown RBP12.03□□□□□ -0.48
TDP2-203ENST00000478285 EMID1Q96A84 441 aaPredicted RBP12.03□□□□□ -0.48
TDP2-203ENST00000478285 GJA5P36382 358 aa12.02□□□□□ -0.49
TDP2-203ENST00000478285 MMP16P51512 607 aa12.02□□□□□ -0.49
TDP2-203ENST00000478285 PLA2G2CQ5R387 149 aa12.02□□□□□ -0.49
TDP2-203ENST00000478285 GPBP1L1Q9HC44 474 aaPredicted RBP12.02□□□□□ -0.49
TDP2-203ENST00000478285 FCF1Q9Y324 198 aaKnown RBP12.02□□□□□ -0.49
TDP2-203ENST00000478285 SLC19A1P41440 591 aa12.01□□□□□ -0.49
TDP2-203ENST00000478285 RSBN1LQ6PCB5 846 aaPredicted RBP12.01□□□□□ -0.49
TDP2-203ENST00000478285 RETREG3Q86VR2 466 aa12.01□□□□□ -0.49
TDP2-203ENST00000478285 IRX2Q9BZI1 471 aaPredicted RBP12.01□□□□□ -0.49
TDP2-203ENST00000478285 KDM4CQ9H3R0 1056 aa12.01□□□□□ -0.49
TDP2-203ENST00000478285 C6orf229H3BNL8 230 aa12□□□□□ -0.49
TDP2-203ENST00000478285 TPRNQ4KMQ1 711 aa12□□□□□ -0.49
TDP2-203ENST00000478285 SPTLC1O15269 473 aa11.99□□□□□ -0.49
TDP2-203ENST00000478285 DXOO77932 396 aaKnown RBP11.99□□□□□ -0.49
TDP2-203ENST00000478285 LIAT1Q6ZQX7 453 aa11.99□□□□□ -0.49
TDP2-203ENST00000478285 MYSM1Q5VVJ2 828 aa11.98□□□□□ -0.49
TDP2-203ENST00000478285 SPRYD7Q5W111 196 aa11.97□□□□□ -0.49
TDP2-203ENST00000478285 RIC3Q7Z5B4 369 aa11.97□□□□□ -0.49
TDP2-203ENST00000478285 JUNDP17535 347 aa11.96□□□□□ -0.49
TDP2-203ENST00000478285 MTMR2Q13614 643 aa11.96□□□□□ -0.49
TDP2-203ENST00000478285 PCDHB15Q9Y5E8 787 aa11.95□□□□□ -0.5
TDP2-203ENST00000478285 SPDYE5A6NIY4 337 aa11.94□□□□□ -0.5
TDP2-203ENST00000478285 RPIAP49247 311 aa11.93□□□□□ -0.5
TDP2-203ENST00000478285 ZNF598Q86UK7 904 aaKnown RBP11.93□□□□□ -0.5
TDP2-203ENST00000478285 FAM117AQ9C073 453 aa11.93□□□□□ -0.5
TDP2-203ENST00000478285 LIMD1Q9UGP4 676 aa11.93□□□□□ -0.5
TDP2-203ENST00000478285 DDRGK1Q96HY6 314 aa11.92□□□□□ -0.5
TDP2-203ENST00000478285 RSPH6AQ9H0K4 717 aa11.92□□□□□ -0.5
TDP2-203ENST00000478285 PRDM2Q13029 1718 aa11.91□□□□□ -0.5
TDP2-203ENST00000478285 TUSC1Q2TAM9 212 aa11.91□□□□□ -0.5
TDP2-203ENST00000478285 ZNF697Q5TEC3 545 aa11.91□□□□□ -0.5
TDP2-203ENST00000478285 PRPF38BQ5VTL8 546 aaKnown RBP11.91□□□□□ -0.5
TDP2-203ENST00000478285 PRR7Q8TB68 274 aa11.91□□□□□ -0.5
TDP2-203ENST00000478285 ZBTB3Q9H5J0 574 aa11.91□□□□□ -0.5
TDP2-203ENST00000478285 HRCP23327 699 aa11.9□□□□□ -0.5
TDP2-203ENST00000478285 CLK2P49760 499 aaKnown RBP11.9□□□□□ -0.5
TDP2-203ENST00000478285 LAPTM4AQ15012 233 aa11.89□□□□□ -0.51
TDP2-203ENST00000478285 NEUROD2Q15784 382 aa11.89□□□□□ -0.51
TDP2-203ENST00000478285 CSPP1Q1MSJ5 1256 aa11.89□□□□□ -0.51
TDP2-203ENST00000478285 ZBTB24O43167 697 aaPredicted RBP11.88□□□□□ -0.51
TDP2-203ENST00000478285 GFRA3O60609 400 aa11.88□□□□□ -0.51
TDP2-203ENST00000478285 CCDC24Q8N4L8 307 aa11.88□□□□□ -0.51
TDP2-203ENST00000478285 CABLES1Q8TDN4 633 aa11.88□□□□□ -0.51
TDP2-203ENST00000478285 NUDT12Q9BQG2 462 aa11.88□□□□□ -0.51
TDP2-203ENST00000478285 PLEKHG3A1L390 1219 aa11.87□□□□□ -0.51
TDP2-203ENST00000478285 DESI1Q6ICB0 168 aa11.87□□□□□ -0.51
TDP2-203ENST00000478285 PDZRN3Q9UPQ7 1066 aa11.87□□□□□ -0.51
TDP2-203ENST00000478285 CD2BP2O95400 341 aaKnown RBP11.86□□□□□ -0.51
TDP2-203ENST00000478285 QPCTQ16769 361 aa11.86□□□□□ -0.51
TDP2-203ENST00000478285 SH3D19Q5HYK7 790 aa11.86□□□□□ -0.51
TDP2-203ENST00000478285 TRIM67Q6ZTA4 783 aa11.86□□□□□ -0.51
TDP2-203ENST00000478285 POLR3EQ9NVU0 708 aa11.86□□□□□ -0.51
TDP2-203ENST00000478285 CCDC88BA6NC98 1476 aa11.85□□□□□ -0.51
TDP2-203ENST00000478285 CFAP99D6REC4 459 aa11.85□□□□□ -0.51
TDP2-203ENST00000478285 NRG2O14511 850 aaPredicted RBP11.85□□□□□ -0.51
TDP2-203ENST00000478285 LILRB3O75022 631 aa11.85□□□□□ -0.51
TDP2-203ENST00000478285 PTPRNQ16849 979 aa11.85□□□□□ -0.51
TDP2-203ENST00000478285 BRPF1P55201 1214 aaPredicted RBP11.84□□□□□ -0.51
TDP2-203ENST00000478285 PRR20EP86478 221 aa11.84□□□□□ -0.51
TDP2-203ENST00000478285 PRR20CP86479 221 aa11.84□□□□□ -0.51
TDP2-203ENST00000478285 PRR20DP86480 221 aa11.84□□□□□ -0.51
TDP2-203ENST00000478285 PRR20BP86481 221 aa11.84□□□□□ -0.51
TDP2-203ENST00000478285 PRR20AP86496 221 aa11.84□□□□□ -0.51
TDP2-203ENST00000478285 TRIM32Q13049 653 aa11.84□□□□□ -0.51
TDP2-203ENST00000478285 SKIV2LQ15477 1246 aaKnown RBP11.84□□□□□ -0.51
TDP2-203ENST00000478285 NUTM2BA6NNL0 878 aaPredicted RBP11.83□□□□□ -0.52
TDP2-203ENST00000478285 NUTM2EB1AL46 878 aaPredicted RBP11.83□□□□□ -0.52
TDP2-203ENST00000478285 GDF9O60383 454 aa11.83□□□□□ -0.52
TDP2-203ENST00000478285 CCNYL3P0C7X3 344 aa11.83□□□□□ -0.52
TDP2-203ENST00000478285 NUTM2DQ5VT03 806 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms