RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 KIFC2Q96AC6 838 aa10.67□□□□□ -0.7
NCKAP1-204ENST00000477988 RTN4Q9NQC3 1192 aaKnown RBP10.67□□□□□ -0.7
NCKAP1-204ENST00000477988 RDH13Q8NBN7 331 aa10.66□□□□□ -0.7
NCKAP1-204ENST00000477988 MRGPRX2Q96LB1 330 aa10.66□□□□□ -0.7
NCKAP1-204ENST00000477988 LORP23490 312 aaPredicted RBP10.65□□□□□ -0.7
NCKAP1-204ENST00000477988 TRIM32Q13049 653 aa10.65□□□□□ -0.7
NCKAP1-204ENST00000477988 GCGRP47871 477 aa10.64□□□□□ -0.71
NCKAP1-204ENST00000477988 HPS1Q92902 700 aa10.64□□□□□ -0.71
NCKAP1-204ENST00000477988 FAM181BA6NEQ2 426 aa10.63□□□□□ -0.71
NCKAP1-204ENST00000477988 HIC1Q14526 733 aa10.63□□□□□ -0.71
NCKAP1-204ENST00000477988 RNF19BQ6ZMZ0 732 aa10.63□□□□□ -0.71
NCKAP1-204ENST00000477988 DDX11L8A8MPP1 907 aa10.62□□□□□ -0.71
NCKAP1-204ENST00000477988 MMP16P51512 607 aa10.61□□□□□ -0.71
NCKAP1-204ENST00000477988 FECHP22830 423 aa10.6□□□□□ -0.71
NCKAP1-204ENST00000477988 SLC16A10Q8TF71 515 aa10.6□□□□□ -0.71
NCKAP1-204ENST00000477988 REPIN1Q9BWE0 567 aaKnown RBP10.59□□□□□ -0.71
NCKAP1-204ENST00000477988 NXF1Q9UBU9 619 aaKnown RBP10.58□□□□□ -0.72
NCKAP1-204ENST00000477988 GMPRP36959 345 aa10.57□□□□□ -0.72
NCKAP1-204ENST00000477988 ZSCAN1Q8NBB4 408 aa10.57□□□□□ -0.72
NCKAP1-204ENST00000477988 SULF1Q8IWU6 871 aa10.56□□□□□ -0.72
NCKAP1-204ENST00000477988 NPAS3Q8IXF0 933 aa10.56□□□□□ -0.72
NCKAP1-204ENST00000477988 TSHZ2Q9NRE2 1034 aa10.56□□□□□ -0.72
NCKAP1-204ENST00000477988 SEMA3EO15041 775 aa10.54□□□□□ -0.72
NCKAP1-204ENST00000477988 RC3H1Q5TC82 1133 aaKnown RBP10.54□□□□□ -0.72
NCKAP1-204ENST00000477988 NLRP7Q8WX94 980 aa10.54□□□□□ -0.72
NCKAP1-204ENST00000477988 GNPATO15228 680 aa10.53□□□□□ -0.72
NCKAP1-204ENST00000477988 DXOO77932 396 aaKnown RBP10.53□□□□□ -0.72
NCKAP1-204ENST00000477988 SKOR1P84550 965 aa10.53□□□□□ -0.72
NCKAP1-204ENST00000477988 GRIPAP1Q4V328 841 aa10.53□□□□□ -0.72
NCKAP1-204ENST00000477988 IRF7Q92985 503 aa10.53□□□□□ -0.72
NCKAP1-204ENST00000477988 Q3C1V9 767 aa10.52□□□□□ -0.73
NCKAP1-204ENST00000477988 P3H3Q8IVL6 736 aa10.52□□□□□ -0.73
NCKAP1-204ENST00000477988 GPR37O15354 613 aa10.51□□□□□ -0.73
NCKAP1-204ENST00000477988 WNT7BP56706 349 aa10.51□□□□□ -0.73
NCKAP1-204ENST00000477988 PHOX2BQ99453 314 aa10.51□□□□□ -0.73
NCKAP1-204ENST00000477988 TRIM46Q7Z4K8 759 aa10.49□□□□□ -0.73
NCKAP1-204ENST00000477988 USB1Q9BQ65 265 aaKnown RBP10.49□□□□□ -0.73
NCKAP1-204ENST00000477988 H3BM21 787 aa10.48□□□□□ -0.73
NCKAP1-204ENST00000477988 RBM26Q5T8P6 1007 aaKnown RBP10.47□□□□□ -0.73
NCKAP1-204ENST00000477988 ALDH1A1P00352 501 aa10.46□□□□□ -0.73
NCKAP1-204ENST00000477988 ERBB4Q15303 1308 aa10.46□□□□□ -0.73
NCKAP1-204ENST00000477988 SIAH2O43255 324 aa10.45□□□□□ -0.74
NCKAP1-204ENST00000477988 BMP1P13497 986 aa10.45□□□□□ -0.74
NCKAP1-204ENST00000477988 VEGFBP49765 207 aa10.44□□□□□ -0.74
NCKAP1-204ENST00000477988 CCDC24Q8N4L8 307 aa10.44□□□□□ -0.74
NCKAP1-204ENST00000477988 SUZ12Q15022 739 aaKnown RBP10.43□□□□□ -0.74
NCKAP1-204ENST00000477988 CAPN5O15484 640 aaPredicted RBP10.42□□□□□ -0.74
NCKAP1-204ENST00000477988 CD46P15529 392 aa10.42□□□□□ -0.74
NCKAP1-204ENST00000477988 TESPA1A2RU30 521 aaPredicted RBP10.41□□□□□ -0.74
NCKAP1-204ENST00000477988 KDM4AO75164 1064 aa10.38□□□□□ -0.75
NCKAP1-204ENST00000477988 SMYD5Q6GMV2 418 aa10.38□□□□□ -0.75
NCKAP1-204ENST00000477988 HLA-CQ95604 372 aa10.37□□□□□ -0.75
NCKAP1-204ENST00000477988 ZFP42Q96MM3 310 aa10.36□□□□□ -0.75
NCKAP1-204ENST00000477988 WASF2Q9Y6W5 498 aa10.36□□□□□ -0.75
NCKAP1-204ENST00000477988 JUNDP17535 347 aa10.35□□□□□ -0.75
NCKAP1-204ENST00000477988 PTCRAQ6ISU1 281 aaPredicted RBP10.35□□□□□ -0.75
NCKAP1-204ENST00000477988 EHBP1Q8NDI1 1231 aa10.35□□□□□ -0.75
NCKAP1-204ENST00000477988 VSIG8P0DPA2 414 aa10.34□□□□□ -0.75
NCKAP1-204ENST00000477988 USP46P62068 366 aa10.34□□□□□ -0.75
NCKAP1-204ENST00000477988 GSK3AP49840 483 aa10.32□□□□□ -0.76
NCKAP1-204ENST00000477988 KCNMA1Q12791 1236 aa10.32□□□□□ -0.76
NCKAP1-204ENST00000477988 HOXA2O43364 376 aa10.31□□□□□ -0.76
NCKAP1-204ENST00000477988 SH3BP2P78314 561 aa10.3□□□□□ -0.76
NCKAP1-204ENST00000477988 NUDT12Q9BQG2 462 aa10.3□□□□□ -0.76
NCKAP1-204ENST00000477988 SYMPKQ92797 1274 aaKnown RBP10.28□□□□□ -0.76
NCKAP1-204ENST00000477988 GUCA2AQ02747 115 aa10.27□□□□□ -0.77
NCKAP1-204ENST00000477988 KCTD17Q8N5Z5 321 aa10.27□□□□□ -0.77
NCKAP1-204ENST00000477988 MRPL14Q6P1L8 145 aaKnown RBP10.26□□□□□ -0.77
NCKAP1-204ENST00000477988 RETREG3Q86VR2 466 aa10.25□□□□□ -0.77
NCKAP1-204ENST00000477988 MPNDQ8N594 471 aa10.25□□□□□ -0.77
NCKAP1-204ENST00000477988 TLL2Q9Y6L7 1015 aa10.23□□□□□ -0.77
NCKAP1-204ENST00000477988 SOBPA7XYQ1 873 aa10.22□□□□□ -0.77
NCKAP1-204ENST00000477988 TIMP2P16035 220 aa10.22□□□□□ -0.77
NCKAP1-204ENST00000477988 NNTQ13423 1086 aa10.22□□□□□ -0.77
NCKAP1-204ENST00000477988 SCARF1Q14162 830 aa10.22□□□□□ -0.77
NCKAP1-204ENST00000477988 GPIHBP1Q8IV16 184 aa10.22□□□□□ -0.77
NCKAP1-204ENST00000477988 PURBQ96QR8 312 aaKnown RBP10.22□□□□□ -0.77
NCKAP1-204ENST00000477988 CCNYL3P0C7X3 344 aa10.21□□□□□ -0.77
NCKAP1-204ENST00000477988 PLEKHG3A1L390 1219 aa10.2□□□□□ -0.78
NCKAP1-204ENST00000477988 KLF16Q9BXK1 252 aaPredicted RBP10.2□□□□□ -0.78
NCKAP1-204ENST00000477988 MDM2Q00987 491 aaPredicted RBP10.19□□□□□ -0.78
NCKAP1-204ENST00000477988 MAP2K5Q13163 448 aa10.19□□□□□ -0.78
NCKAP1-204ENST00000477988 UNC93B1Q9H1C4 597 aa10.19□□□□□ -0.78
NCKAP1-204ENST00000477988 ADH1CP00326 375 aa10.18□□□□□ -0.78
NCKAP1-204ENST00000477988 MS4A1P11836 297 aa10.18□□□□□ -0.78
NCKAP1-204ENST00000477988 VARSP26640 1264 aaKnown RBP10.18□□□□□ -0.78
NCKAP1-204ENST00000477988 EVA1BQ9NVM1 165 aa10.18□□□□□ -0.78
NCKAP1-204ENST00000477988 WDR4P57081 412 aaKnown RBP10.17□□□□□ -0.78
NCKAP1-204ENST00000477988 TMEM151AQ8N4L1 468 aa10.17□□□□□ -0.78
NCKAP1-204ENST00000477988 BAP1Q92560 729 aa10.17□□□□□ -0.78
NCKAP1-204ENST00000477988 RASSF7Q02833 373 aa10.16□□□□□ -0.78
NCKAP1-204ENST00000477988 PTPRNQ16849 979 aa10.16□□□□□ -0.78
NCKAP1-204ENST00000477988 LINC01559Q495D7 138 aa10.16□□□□□ -0.78
NCKAP1-204ENST00000477988 PCDHGC3Q9UN70 934 aa10.16□□□□□ -0.78
NCKAP1-204ENST00000477988 IRF6O14896 467 aa10.15□□□□□ -0.78
NCKAP1-204ENST00000477988 PPFIA3O75145 1194 aa10.15□□□□□ -0.78
NCKAP1-204ENST00000477988 PLCB2Q00722 1185 aa10.15□□□□□ -0.78
NCKAP1-204ENST00000477988 ZNF511Q8NB15 262 aa10.15□□□□□ -0.78
NCKAP1-204ENST00000477988 GDF11O95390 407 aa10.14□□□□□ -0.79
NCKAP1-204ENST00000477988 KCNH2Q12809 1159 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms