RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 AMHR2Q16671 573 aa11.07□□□□□ -0.64
LMBR1-216ENST00000477983 PRDM9Q9NQV7 894 aa11.07□□□□□ -0.64
LMBR1-216ENST00000477983 USB1Q9BQ65 265 aaKnown RBP11.06□□□□□ -0.64
LMBR1-216ENST00000477983 SSTR3P32745 418 aaPredicted RBP11.05□□□□□ -0.64
LMBR1-216ENST00000477983 HLA-CQ95604 372 aa11.05□□□□□ -0.64
LMBR1-216ENST00000477983 CD2BP2O95400 341 aaKnown RBP11.04□□□□□ -0.64
LMBR1-216ENST00000477983 DGAT1O75907 488 aa11.03□□□□□ -0.64
LMBR1-216ENST00000477983 NUTM1Q86Y26 1132 aa11.03□□□□□ -0.64
LMBR1-216ENST00000477983 PKD2L1Q9P0L9 805 aa11.03□□□□□ -0.64
LMBR1-216ENST00000477983 DXOO77932 396 aaKnown RBP11.01□□□□□ -0.65
LMBR1-216ENST00000477983 TNFRSF10AO00220 468 aa10.99□□□□□ -0.65
LMBR1-216ENST00000477983 GUCA2AQ02747 115 aa10.99□□□□□ -0.65
LMBR1-216ENST00000477983 SPIRE2Q8WWL2 714 aa10.99□□□□□ -0.65
LMBR1-216ENST00000477983 ZBTB24O43167 697 aaPredicted RBP10.98□□□□□ -0.65
LMBR1-216ENST00000477983 TTLL12Q14166 644 aaPredicted RBP10.98□□□□□ -0.65
LMBR1-216ENST00000477983 PKDCCQ504Y2 493 aa10.98□□□□□ -0.65
LMBR1-216ENST00000477983 GIGYF2Q6Y7W6 1299 aaKnown RBP10.98□□□□□ -0.65
LMBR1-216ENST00000477983 TRIM66O15016 1216 aa10.97□□□□□ -0.65
LMBR1-216ENST00000477983 MYT1Q01538 1121 aa10.97□□□□□ -0.65
LMBR1-216ENST00000477983 FDX1P10109 184 aa10.96□□□□□ -0.65
LMBR1-216ENST00000477983 FOXC1Q12948 553 aa10.96□□□□□ -0.65
LMBR1-216ENST00000477983 AK7Q96M32 723 aa10.96□□□□□ -0.65
LMBR1-216ENST00000477983 PCDHGC3Q9UN70 934 aa10.96□□□□□ -0.65
LMBR1-216ENST00000477983 RETREG3Q86VR2 466 aa10.95□□□□□ -0.66
LMBR1-216ENST00000477983 SYMPKQ92797 1274 aaKnown RBP10.95□□□□□ -0.66
LMBR1-216ENST00000477983 TOR4AQ9NXH8 423 aa10.95□□□□□ -0.66
LMBR1-216ENST00000477983 FAM187AA6NFU0 413 aa10.93□□□□□ -0.66
LMBR1-216ENST00000477983 JUNDP17535 347 aa10.93□□□□□ -0.66
LMBR1-216ENST00000477983 TRIM32Q13049 653 aa10.93□□□□□ -0.66
LMBR1-216ENST00000477983 PARP9Q8IXQ6 854 aa10.93□□□□□ -0.66
LMBR1-216ENST00000477983 BEGAINQ9BUH8 593 aa10.92□□□□□ -0.66
LMBR1-216ENST00000477983 MOXD2PA6NHM9 499 aa10.91□□□□□ -0.66
LMBR1-216ENST00000477983 NDUFV2P19404 249 aa10.91□□□□□ -0.66
LMBR1-216ENST00000477983 WNT7AO00755 349 aa10.9□□□□□ -0.66
LMBR1-216ENST00000477983 GJA5P36382 358 aa10.9□□□□□ -0.66
LMBR1-216ENST00000477983 DIXDC1Q155Q3 683 aa10.9□□□□□ -0.66
LMBR1-216ENST00000477983 ZNF787Q6DD87 383 aa10.89□□□□□ -0.67
LMBR1-216ENST00000477983 CYP4X1Q8N118 509 aa10.89□□□□□ -0.67
LMBR1-216ENST00000477983 C6orf229H3BNL8 230 aa10.88□□□□□ -0.67
LMBR1-216ENST00000477983 AVPP01185 164 aa10.88□□□□□ -0.67
LMBR1-216ENST00000477983 MS4A1P11836 297 aa10.88□□□□□ -0.67
LMBR1-216ENST00000477983 CCDC24Q8N4L8 307 aa10.88□□□□□ -0.67
LMBR1-216ENST00000477983 TBC1D2Q9BYX2 928 aa10.87□□□□□ -0.67
LMBR1-216ENST00000477983 SPDYE5A6NIY4 337 aa10.86□□□□□ -0.67
LMBR1-216ENST00000477983 CRIPAKQ8N1N5 446 aa10.86□□□□□ -0.67
LMBR1-216ENST00000477983 NUDT12Q9BQG2 462 aa10.86□□□□□ -0.67
LMBR1-216ENST00000477983 AAASQ9NRG9 546 aa10.86□□□□□ -0.67
LMBR1-216ENST00000477983 WNT7BP56706 349 aa10.85□□□□□ -0.67
LMBR1-216ENST00000477983 PDE4DQ08499 809 aa10.85□□□□□ -0.67
LMBR1-216ENST00000477983 MTMR2Q13614 643 aa10.84□□□□□ -0.67
LMBR1-216ENST00000477983 DESI1Q6ICB0 168 aa10.84□□□□□ -0.67
LMBR1-216ENST00000477983 PTCRAQ6ISU1 281 aaPredicted RBP10.84□□□□□ -0.67
LMBR1-216ENST00000477983 RSBN1LQ6PCB5 846 aaPredicted RBP10.84□□□□□ -0.67
LMBR1-216ENST00000477983 SNIP1Q8TAD8 396 aaKnown RBP10.84□□□□□ -0.67
LMBR1-216ENST00000477983 MRGPRX2Q96LB1 330 aa10.84□□□□□ -0.67
LMBR1-216ENST00000477983 SPTLC1O15269 473 aa10.83□□□□□ -0.68
LMBR1-216ENST00000477983 SKOR1P84550 965 aa10.83□□□□□ -0.68
LMBR1-216ENST00000477983 SLC24A3Q9HC58 644 aa10.83□□□□□ -0.68
LMBR1-216ENST00000477983 TTC24A2A3L6 582 aaPredicted RBP10.82□□□□□ -0.68
LMBR1-216ENST00000477983 PTPRNQ16849 979 aa10.82□□□□□ -0.68
LMBR1-216ENST00000477983 PRR7Q8TB68 274 aa10.82□□□□□ -0.68
LMBR1-216ENST00000477983 EVA1BQ9NVM1 165 aa10.82□□□□□ -0.68
LMBR1-216ENST00000477983 SMCPP49901 116 aaPredicted RBP10.81□□□□□ -0.68
LMBR1-216ENST00000477983 CTC1Q2NKJ3 1217 aa10.81□□□□□ -0.68
LMBR1-216ENST00000477983 RC3H1Q5TC82 1133 aaKnown RBP10.81□□□□□ -0.68
LMBR1-216ENST00000477983 ZNF775Q96BV0 537 aaPredicted RBP10.81□□□□□ -0.68
LMBR1-216ENST00000477983 PCDHB15Q9Y5E8 787 aa10.81□□□□□ -0.68
LMBR1-216ENST00000477983 ST8SIA5O15466 376 aa10.8□□□□□ -0.68
LMBR1-216ENST00000477983 CCNYL3P0C7X3 344 aa10.8□□□□□ -0.68
LMBR1-216ENST00000477983 SMPD1P17405 629 aa10.8□□□□□ -0.68
LMBR1-216ENST00000477983 POTECB2RU33 542 aa10.79□□□□□ -0.68
LMBR1-216ENST00000477983 PRPF38BQ5VTL8 546 aaKnown RBP10.78□□□□□ -0.68
LMBR1-216ENST00000477983 RIC3Q7Z5B4 369 aa10.78□□□□□ -0.68
LMBR1-216ENST00000477983 KCNH2Q12809 1159 aa10.77□□□□□ -0.69
LMBR1-216ENST00000477983 TUSC1Q2TAM9 212 aa10.77□□□□□ -0.69
LMBR1-216ENST00000477983 J3QL48 77 aa10.76□□□□□ -0.69
LMBR1-216ENST00000477983 AXIN1O15169 862 aa10.76□□□□□ -0.69
LMBR1-216ENST00000477983 HRCP23327 699 aa10.76□□□□□ -0.69
LMBR1-216ENST00000477983 SIAH2O43255 324 aa10.75□□□□□ -0.69
LMBR1-216ENST00000477983 LYPD8Q6UX82 237 aa10.75□□□□□ -0.69
LMBR1-216ENST00000477983 ZBTB3Q9H5J0 574 aa10.75□□□□□ -0.69
LMBR1-216ENST00000477983 SLC24A1O60721 1099 aa10.74□□□□□ -0.69
LMBR1-216ENST00000477983 SH3BP2P78314 561 aa10.74□□□□□ -0.69
LMBR1-216ENST00000477983 MYSM1Q5VVJ2 828 aa10.74□□□□□ -0.69
LMBR1-216ENST00000477983 UNC93B1Q9H1C4 597 aa10.74□□□□□ -0.69
LMBR1-216ENST00000477983 DACH1Q9UI36 760 aa10.74□□□□□ -0.69
LMBR1-216ENST00000477983 CFAP99D6REC4 459 aa10.73□□□□□ -0.69
LMBR1-216ENST00000477983 BCANQ96GW7 911 aa10.72□□□□□ -0.69
LMBR1-216ENST00000477983 LIMD1Q9UGP4 676 aa10.72□□□□□ -0.69
LMBR1-216ENST00000477983 LILRB3O75022 631 aa10.7□□□□□ -0.7
LMBR1-216ENST00000477983 CABLES1Q8TDN4 633 aa10.7□□□□□ -0.7
LMBR1-216ENST00000477983 BAP1Q92560 729 aa10.7□□□□□ -0.7
LMBR1-216ENST00000477983 HPS1Q92902 700 aa10.7□□□□□ -0.7
LMBR1-216ENST00000477983 EHBP1Q8NDI1 1231 aa10.69□□□□□ -0.7
LMBR1-216ENST00000477983 F12P00748 615 aaPredicted RBP10.68□□□□□ -0.7
LMBR1-216ENST00000477983 ALDH1A1P00352 501 aa10.67□□□□□ -0.7
LMBR1-216ENST00000477983 MPNDQ8N594 471 aa10.67□□□□□ -0.7
LMBR1-216ENST00000477983 ZNF511Q8NB15 262 aa10.67□□□□□ -0.7
LMBR1-216ENST00000477983 RSPH6AQ9H0K4 717 aa10.67□□□□□ -0.7
LMBR1-216ENST00000477983 GMPR2Q9P2T1 348 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms