RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CDC42BPGQ6DT37 1551 aa30.96■■■□□ 2.55
PDLIM1-202ENST00000477757 ZRANB1Q9UGI0 708 aa30.96■■■□□ 2.55
PDLIM1-202ENST00000477757 MARF1Q9Y4F3 1742 aaKnown RBP30.95■■■□□ 2.54
PDLIM1-202ENST00000477757 BCL9LQ86UU0 1499 aa30.94■■■□□ 2.54
PDLIM1-202ENST00000477757 PXDNQ92626 1479 aa30.93■■■□□ 2.54
PDLIM1-202ENST00000477757 VGFO15240 615 aaPredicted RBP30.92■■■□□ 2.54
PDLIM1-202ENST00000477757 CCDC125Q86Z20 511 aa30.9■■■□□ 2.54
PDLIM1-202ENST00000477757 NPHP3Q7Z494 1330 aa30.9■■■□□ 2.54
PDLIM1-202ENST00000477757 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.87■■■□□ 2.53
PDLIM1-202ENST00000477757 PPLO60437 1756 aa30.87■■■□□ 2.53
PDLIM1-202ENST00000477757 RPGRIP1LQ68CZ1 1315 aa30.84■■■□□ 2.53
PDLIM1-202ENST00000477757 ESCO1Q5FWF5 840 aa30.82■■■□□ 2.52
PDLIM1-202ENST00000477757 NAIPQ13075 1403 aa30.81■■■□□ 2.52
PDLIM1-202ENST00000477757 GJD4Q96KN9 370 aaPredicted RBP30.81■■■□□ 2.52
PDLIM1-202ENST00000477757 GLI3P10071 1580 aa30.79■■■□□ 2.52
PDLIM1-202ENST00000477757 LRPPRCP42704 1394 aaKnown RBP30.78■■■□□ 2.52
PDLIM1-202ENST00000477757 BLMP54132 1417 aaPredicted RBP30.77■■■□□ 2.52
PDLIM1-202ENST00000477757 SLIT2O94813 1529 aa30.77■■■□□ 2.52
PDLIM1-202ENST00000477757 RALGAPBQ86X10 1494 aa30.76■■■□□ 2.52
PDLIM1-202ENST00000477757 FOXO3O43524 673 aa30.76■■■□□ 2.51
PDLIM1-202ENST00000477757 XPCQ01831 940 aaPredicted RBP30.76■■■□□ 2.51
PDLIM1-202ENST00000477757 TECPR2O15040 1411 aa30.75■■■□□ 2.51
PDLIM1-202ENST00000477757 USP32Q8NFA0 1604 aa30.73■■■□□ 2.51
PDLIM1-202ENST00000477757 KIF1AQ12756 1690 aa30.71■■■□□ 2.51
PDLIM1-202ENST00000477757 UNC5CLQ8IV45 518 aa30.71■■■□□ 2.51
PDLIM1-202ENST00000477757 KNDC1Q76NI1 1749 aa30.7■■■□□ 2.5
PDLIM1-202ENST00000477757 FMN2Q9NZ56 1722 aa30.7■■■□□ 2.5
PDLIM1-202ENST00000477757 RRBP1Q9P2E9 1410 aaKnown RBP30.69■■■□□ 2.5
PDLIM1-202ENST00000477757 CCDC144AA2RUR9 1427 aa30.68■■■□□ 2.5
PDLIM1-202ENST00000477757 BRWD3Q6RI45 1802 aa30.67■■■□□ 2.5
PDLIM1-202ENST00000477757 SPATA31A3Q5VYP0 1347 aa30.67■■■□□ 2.5
PDLIM1-202ENST00000477757 LRP5O75197 1615 aa30.65■■■□□ 2.5
PDLIM1-202ENST00000477757 PPARGC1BQ86YN6 1023 aaKnown RBP30.65■■■□□ 2.5
PDLIM1-202ENST00000477757 NUTM2FA1L443 756 aa30.63■■■□□ 2.49
PDLIM1-202ENST00000477757 ADGRF5Q8IZF2 1346 aa30.63■■■□□ 2.49
PDLIM1-202ENST00000477757 IFT172Q9UG01 1749 aa30.62■■■□□ 2.49
PDLIM1-202ENST00000477757 WAPLQ7Z5K2 1190 aa30.62■■■□□ 2.49
PDLIM1-202ENST00000477757 SLC4A1APQ9BWU0 796 aaKnown RBP30.62■■■□□ 2.49
PDLIM1-202ENST00000477757 ABCC11Q96J66 1382 aa30.62■■■□□ 2.49
PDLIM1-202ENST00000477757 PLEKHH1Q9ULM0 1364 aa30.61■■■□□ 2.49
PDLIM1-202ENST00000477757 PLCH1Q4KWH8 1693 aa30.6■■■□□ 2.49
PDLIM1-202ENST00000477757 DEFB132Q7Z7B7 95 aa30.6■■■□□ 2.49
PDLIM1-202ENST00000477757 STK26Q9P289 416 aa30.6■■■□□ 2.49
PDLIM1-202ENST00000477757 NWD2Q9ULI1 1742 aa30.59■■■□□ 2.49
PDLIM1-202ENST00000477757 TNS3Q68CZ2 1445 aa30.59■■■□□ 2.49
PDLIM1-202ENST00000477757 SPATA31E1Q6ZUB1 1445 aa30.57■■■□□ 2.48
PDLIM1-202ENST00000477757 ABCA3Q99758 1704 aa30.57■■■□□ 2.48
PDLIM1-202ENST00000477757 ANKRD30BQ9BXX2 1392 aa30.56■■■□□ 2.48
PDLIM1-202ENST00000477757 SF3B2Q13435 895 aaKnown RBP30.56■■■□□ 2.48
PDLIM1-202ENST00000477757 VPS72Q15906 364 aa30.56■■■□□ 2.48
PDLIM1-202ENST00000477757 SEPT12Q8IYM1 358 aa30.56■■■□□ 2.48
PDLIM1-202ENST00000477757 PIK3C2GO75747 1445 aa30.56■■■□□ 2.48
PDLIM1-202ENST00000477757 KRT28Q7Z3Y7 464 aa30.53■■■□□ 2.48
PDLIM1-202ENST00000477757 YTHDC2Q9H6S0 1430 aaKnown RBP30.53■■■□□ 2.48
PDLIM1-202ENST00000477757 ONECUT3O60422 494 aaPredicted RBP30.51■■■□□ 2.47
PDLIM1-202ENST00000477757 HAP1P54257 671 aaPredicted RBP30.49■■■□□ 2.47
PDLIM1-202ENST00000477757 TMEM132EQ6IEE7 984 aa30.49■■■□□ 2.47
PDLIM1-202ENST00000477757 SBNO1A3KN83 1393 aa30.48■■■□□ 2.47
PDLIM1-202ENST00000477757 NRXN1Q9ULB1 1477 aa30.48■■■□□ 2.47
PDLIM1-202ENST00000477757 RGPD8O14715 1765 aaPredicted RBP30.48■■■□□ 2.47
PDLIM1-202ENST00000477757 KRT27Q7Z3Y8 459 aa30.47■■■□□ 2.47
PDLIM1-202ENST00000477757 PHF8Q9UPP1 1060 aa30.47■■■□□ 2.47
PDLIM1-202ENST00000477757 ARHGEF10O15013 1369 aa30.46■■■□□ 2.47
PDLIM1-202ENST00000477757 RGL3Q3MIN7 710 aa30.46■■■□□ 2.47
PDLIM1-202ENST00000477757 CABLES1Q8TDN4 633 aa30.46■■■□□ 2.47
PDLIM1-202ENST00000477757 PSME1Q06323 249 aa30.45■■■□□ 2.47
PDLIM1-202ENST00000477757 NRAPQ86VF7 1730 aa30.44■■■□□ 2.46
PDLIM1-202ENST00000477757 SIRT1Q96EB6 747 aa30.44■■■□□ 2.46
PDLIM1-202ENST00000477757 CCDC9Q9Y3X0 531 aaKnown RBP30.44■■■□□ 2.46
PDLIM1-202ENST00000477757 BAG6P46379 1132 aa30.4■■■□□ 2.46
PDLIM1-202ENST00000477757 PSDA5PKW4 1024 aaPredicted RBP30.37■■■□□ 2.45
PDLIM1-202ENST00000477757 HRCP23327 699 aa30.37■■■□□ 2.45
PDLIM1-202ENST00000477757 ANKARQ7Z5J8 1434 aa30.37■■■□□ 2.45
PDLIM1-202ENST00000477757 RGPD1P0DJD0 1748 aa30.36■■■□□ 2.45
PDLIM1-202ENST00000477757 FAM83GA6ND36 823 aa30.36■■■□□ 2.45
PDLIM1-202ENST00000477757 PLEKHG5O94827 1062 aa30.36■■■□□ 2.45
PDLIM1-202ENST00000477757 LMOD2Q6P5Q4 547 aa30.35■■■□□ 2.45
PDLIM1-202ENST00000477757 TRPM3Q9HCF6 1732 aaPredicted RBP30.35■■■□□ 2.45
PDLIM1-202ENST00000477757 ADGRB2O60241 1585 aa30.34■■■□□ 2.45
PDLIM1-202ENST00000477757 A0A0G2JS52 829 aa30.34■■■□□ 2.45
PDLIM1-202ENST00000477757 MYT1Q01538 1121 aa30.34■■■□□ 2.45
PDLIM1-202ENST00000477757 COL14A1Q05707 1796 aaKnown RBP30.33■■■□□ 2.45
PDLIM1-202ENST00000477757 C14orf93Q9H972 538 aaKnown RBP30.33■■■□□ 2.45
PDLIM1-202ENST00000477757 FAM98CQ17RN3 349 aaKnown RBP30.32■■■□□ 2.44
PDLIM1-202ENST00000477757 DHX57Q6P158 1386 aaKnown RBP30.31■■■□□ 2.44
PDLIM1-202ENST00000477757 ALS2Q96Q42 1657 aa30.31■■■□□ 2.44
PDLIM1-202ENST00000477757 DLC1Q96QB1 1528 aa30.31■■■□□ 2.44
PDLIM1-202ENST00000477757 DISP2A7MBM2 1401 aa30.3■■■□□ 2.44
PDLIM1-202ENST00000477757 THSD7AQ9UPZ6 1657 aa30.3■■■□□ 2.44
PDLIM1-202ENST00000477757 TNS1Q9HBL0 1735 aaKnown RBP30.28■■■□□ 2.44
PDLIM1-202ENST00000477757 PRAM1Q96QH2 718 aa30.28■■■□□ 2.44
PDLIM1-202ENST00000477757 MPHOSPH9Q99550 1183 aa30.28■■■□□ 2.44
PDLIM1-202ENST00000477757 BTG4Q9NY30 223 aa30.27■■■□□ 2.44
PDLIM1-202ENST00000477757 CRYBG1Q9Y4K1 1723 aa30.25■■■□□ 2.43
PDLIM1-202ENST00000477757 SAFB2Q14151 953 aaKnown RBP eCLIP30.25■■■□□ 2.43
PDLIM1-202ENST00000477757 CFAP70Q5T0N1 1121 aa30.25■■■□□ 2.43
PDLIM1-202ENST00000477757 PMFBP1Q8TBY8 1022 aa30.25■■■□□ 2.43
PDLIM1-202ENST00000477757 EN1Q05925 392 aaPredicted RBP30.24■■■□□ 2.43
PDLIM1-202ENST00000477757 SPATA31A5Q5VU36 1347 aa30.22■■■□□ 2.43
PDLIM1-202ENST00000477757 SPATA31A7Q8IWB4 1347 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms