RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 PPP6R1Q9UPN7 881 aa14.63□□□□□ -0.07
HLA-DMB-260ENST00000477537 EVC2Q86UK5 1308 aa14.63□□□□□ -0.07
HLA-DMB-260ENST00000477537 C3P01024 1663 aa14.63□□□□□ -0.07
HLA-DMB-260ENST00000477537 TULP4Q9NRJ4 1543 aa14.62□□□□□ -0.07
HLA-DMB-260ENST00000477537 STK26Q9P289 416 aa14.61□□□□□ -0.07
HLA-DMB-260ENST00000477537 PUS7Q96PZ0 661 aaKnown RBP14.6□□□□□ -0.07
HLA-DMB-260ENST00000477537 STAG3Q9UJ98 1225 aa14.6□□□□□ -0.07
HLA-DMB-260ENST00000477537 PLEKHH1Q9ULM0 1364 aa14.6□□□□□ -0.07
HLA-DMB-260ENST00000477537 SAFB2Q14151 953 aaKnown RBP eCLIP14.6□□□□□ -0.07
HLA-DMB-260ENST00000477537 CCDC136Q96JN2 1154 aa14.6□□□□□ -0.07
HLA-DMB-260ENST00000477537 USP32Q8NFA0 1604 aa14.59□□□□□ -0.07
HLA-DMB-260ENST00000477537 MORC1Q86VD1 984 aa14.59□□□□□ -0.07
HLA-DMB-260ENST00000477537 CCDC146Q8IYE0 955 aa14.58□□□□□ -0.07
HLA-DMB-260ENST00000477537 CABP2Q9NPB3 220 aa14.58□□□□□ -0.07
HLA-DMB-260ENST00000477537 SPATA31D1Q6ZQQ2 1576 aa14.57□□□□□ -0.08
HLA-DMB-260ENST00000477537 KDM4FA0A1W2PPD8 638 aa14.57□□□□□ -0.08
HLA-DMB-260ENST00000477537 ALKQ9UM73 1620 aa14.57□□□□□ -0.08
HLA-DMB-260ENST00000477537 YTHDC2Q9H6S0 1430 aaKnown RBP14.57□□□□□ -0.08
HLA-DMB-260ENST00000477537 PTPRMP28827 1452 aa14.57□□□□□ -0.08
HLA-DMB-260ENST00000477537 POLR3AO14802 1390 aaPredicted RBP14.56□□□□□ -0.08
HLA-DMB-260ENST00000477537 TNNT2P45379 298 aaPredicted RBP14.56□□□□□ -0.08
HLA-DMB-260ENST00000477537 CGNL1Q0VF96 1302 aa14.56□□□□□ -0.08
HLA-DMB-260ENST00000477537 ZNF521Q96K83 1311 aa14.56□□□□□ -0.08
HLA-DMB-260ENST00000477537 ANKRD36BQ8N2N9 1353 aa14.56□□□□□ -0.08
HLA-DMB-260ENST00000477537 EXOC6Q8TAG9 804 aa14.55□□□□□ -0.08
HLA-DMB-260ENST00000477537 PRAM1Q96QH2 718 aa14.54□□□□□ -0.08
HLA-DMB-260ENST00000477537 POGKQ9P215 609 aa14.54□□□□□ -0.08
HLA-DMB-260ENST00000477537 A2ML1A8K2U0 1454 aa14.54□□□□□ -0.08
HLA-DMB-260ENST00000477537 APAF1O14727 1248 aa14.54□□□□□ -0.08
HLA-DMB-260ENST00000477537 SRPK2P78362 688 aaKnown RBP14.54□□□□□ -0.08
HLA-DMB-260ENST00000477537 GOLGA2Q08379 1002 aa14.54□□□□□ -0.08
HLA-DMB-260ENST00000477537 MINK1Q8N4C8 1332 aaPredicted RBP14.53□□□□□ -0.08
HLA-DMB-260ENST00000477537 MYT1Q01538 1121 aa14.53□□□□□ -0.08
HLA-DMB-260ENST00000477537 SHPRHQ149N8 1683 aa14.53□□□□□ -0.08
HLA-DMB-260ENST00000477537 DUSP27Q5VZP5 1158 aa14.53□□□□□ -0.08
HLA-DMB-260ENST00000477537 RIMS2Q9UQ26 1411 aa14.53□□□□□ -0.08
HLA-DMB-260ENST00000477537 NINLQ9Y2I6 1382 aa14.52□□□□□ -0.09
HLA-DMB-260ENST00000477537 NSD2O96028 1365 aa14.51□□□□□ -0.09
HLA-DMB-260ENST00000477537 TNRQ92752 1358 aa14.51□□□□□ -0.09
HLA-DMB-260ENST00000477537 PLIN1O60240 522 aa14.51□□□□□ -0.09
HLA-DMB-260ENST00000477537 SLFN5Q08AF3 891 aa14.51□□□□□ -0.09
HLA-DMB-260ENST00000477537 A0A1W2PP64 1363 aa14.5□□□□□ -0.09
HLA-DMB-260ENST00000477537 ATAD2Q6PL18 1390 aa14.5□□□□□ -0.09
HLA-DMB-260ENST00000477537 MTHFSP49914 203 aa14.49□□□□□ -0.09
HLA-DMB-260ENST00000477537 SETD1AO15047 1707 aaKnown RBP14.49□□□□□ -0.09
HLA-DMB-260ENST00000477537 CFAP53Q96M91 514 aa14.48□□□□□ -0.09
HLA-DMB-260ENST00000477537 TRMT2AQ8IZ69 625 aaKnown RBP14.47□□□□□ -0.09
HLA-DMB-260ENST00000477537 NGEFQ8N5V2 710 aa14.47□□□□□ -0.09
HLA-DMB-260ENST00000477537 CDK19Q9BWU1 502 aa14.47□□□□□ -0.09
HLA-DMB-260ENST00000477537 ABCC11Q96J66 1382 aa14.47□□□□□ -0.09
HLA-DMB-260ENST00000477537 DLC1Q96QB1 1528 aa14.47□□□□□ -0.09
HLA-DMB-260ENST00000477537 CRBNQ96SW2 442 aa14.47□□□□□ -0.09
HLA-DMB-260ENST00000477537 TERF2IPQ9NYB0 399 aa14.47□□□□□ -0.09
HLA-DMB-260ENST00000477537 SPINK5Q9NQ38 1064 aaPredicted RBP14.46□□□□□ -0.09
HLA-DMB-260ENST00000477537 CD163L1Q9NR16 1453 aa14.45□□□□□ -0.1
HLA-DMB-260ENST00000477537 SETD1BQ9UPS6 1966 aaKnown RBP14.45□□□□□ -0.1
HLA-DMB-260ENST00000477537 E9PSI1 815 aa14.45□□□□□ -0.1
HLA-DMB-260ENST00000477537 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.45□□□□□ -0.1
HLA-DMB-260ENST00000477537 RUNDC1Q96C34 613 aa14.45□□□□□ -0.1
HLA-DMB-260ENST00000477537 NRXN3Q9Y4C0 1643 aa14.44□□□□□ -0.1
HLA-DMB-260ENST00000477537 UBR1Q8IWV7 1749 aa14.44□□□□□ -0.1
HLA-DMB-260ENST00000477537 ANKRD26Q9UPS8 1709 aa14.44□□□□□ -0.1
HLA-DMB-260ENST00000477537 NKTRP30414 1462 aaKnown RBP14.44□□□□□ -0.1
HLA-DMB-260ENST00000477537 WAPLQ7Z5K2 1190 aa14.44□□□□□ -0.1
HLA-DMB-260ENST00000477537 GGNBP2Q9H3C7 697 aa14.44□□□□□ -0.1
HLA-DMB-260ENST00000477537 DMRT2Q9Y5R5 561 aa14.44□□□□□ -0.1
HLA-DMB-260ENST00000477537 C20orf194Q5TEA3 1177 aa14.43□□□□□ -0.1
HLA-DMB-260ENST00000477537 HDGFL2Q7Z4V5 671 aaPredicted RBP14.43□□□□□ -0.1
HLA-DMB-260ENST00000477537 FANCIQ9NVI1 1328 aa14.43□□□□□ -0.1
HLA-DMB-260ENST00000477537 WWC1Q8IX03 1113 aa14.43□□□□□ -0.1
HLA-DMB-260ENST00000477537 IQSEC2Q5JU85 1478 aa14.42□□□□□ -0.1
HLA-DMB-260ENST00000477537 CABP1Q9NZU7 370 aa14.42□□□□□ -0.1
HLA-DMB-260ENST00000477537 FYB1O15117 783 aa14.41□□□□□ -0.1
HLA-DMB-260ENST00000477537 TCP11L2Q8N4U5 519 aa14.41□□□□□ -0.1
HLA-DMB-260ENST00000477537 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.41□□□□□ -0.1
HLA-DMB-260ENST00000477537 RRP7AQ9Y3A4 280 aaKnown RBP14.41□□□□□ -0.1
HLA-DMB-260ENST00000477537 CEP170BQ9Y4F5 1589 aaPredicted RBP14.41□□□□□ -0.1
HLA-DMB-260ENST00000477537 NLRP1Q9C000 1473 aa14.41□□□□□ -0.1
HLA-DMB-260ENST00000477537 KIF20BQ96Q89 1820 aa14.41□□□□□ -0.1
HLA-DMB-260ENST00000477537 NEUROD2Q15784 382 aa14.41□□□□□ -0.1
HLA-DMB-260ENST00000477537 MED14O60244 1454 aa14.4□□□□□ -0.1
HLA-DMB-260ENST00000477537 METP08581 1390 aa14.4□□□□□ -0.1
HLA-DMB-260ENST00000477537 HDGFP51858 240 aaKnown RBP14.4□□□□□ -0.1
HLA-DMB-260ENST00000477537 U2AF1L5P0DN76 240 aaPredicted RBP14.39□□□□□ -0.11
HLA-DMB-260ENST00000477537 U2AF1Q01081 240 aaKnown RBP eCLIP14.39□□□□□ -0.11
HLA-DMB-260ENST00000477537 ZNF142P52746 1687 aaPredicted RBP14.37□□□□□ -0.11
HLA-DMB-260ENST00000477537 KNDC1Q76NI1 1749 aa14.37□□□□□ -0.11
HLA-DMB-260ENST00000477537 TXNDC2Q86VQ3 553 aa14.37□□□□□ -0.11
HLA-DMB-260ENST00000477537 COL3A1P02461 1466 aaPredicted RBP14.37□□□□□ -0.11
HLA-DMB-260ENST00000477537 ATP7BP35670 1465 aa14.37□□□□□ -0.11
HLA-DMB-260ENST00000477537 MSH5O43196 834 aa14.36□□□□□ -0.11
HLA-DMB-260ENST00000477537 BCAR3O75815 825 aa14.36□□□□□ -0.11
HLA-DMB-260ENST00000477537 WDR63Q8IWG1 891 aa14.36□□□□□ -0.11
HLA-DMB-260ENST00000477537 TMEM2Q9UHN6 1383 aa14.36□□□□□ -0.11
HLA-DMB-260ENST00000477537 WASLO00401 505 aaPredicted RBP14.35□□□□□ -0.11
HLA-DMB-260ENST00000477537 U2SURPO15042 1029 aaKnown RBP14.35□□□□□ -0.11
HLA-DMB-260ENST00000477537 CCDC27Q2M243 656 aa14.35□□□□□ -0.11
HLA-DMB-260ENST00000477537 ADGRB2O60241 1585 aa14.35□□□□□ -0.11
HLA-DMB-260ENST00000477537 LTKP29376 864 aa14.35□□□□□ -0.11
HLA-DMB-260ENST00000477537 HSPA2P54652 639 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms